1c6o - Revision history

OCA at 05:48, 9 August 2023

2023-08-09T05:48:43Z

←Older revision		Revision as of 05:48, 9 August 2023
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	<StructureSection load='1c6o' size='340' side='right'caption='[[1c6o]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='1c6o' size='340' side='right'caption='[[1c6o]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Scenedesmus_obliquus Scenedesmus~~ obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C6O FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Tetradesmus_obliquus Tetradesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C6O FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6o OCA], [https://pdbe.org/1c6o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c6o RCSB], [https://www.ebi.ac.uk/pdbsum/1c6o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c6o ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6o OCA], [https://pdbe.org/1c6o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c6o RCSB], [https://www.ebi.ac.uk/pdbsum/1c6o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c6o ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/CYC6_TETOB CYC6_TETOB]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</div>		</div>
	<div class="pdbe-citations 1c6o" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1c6o" style="background-color:#fffaf0;"></div>
-
-	==See Also==
-	*[[Cytochrome C 3D structures\|Cytochrome C 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 34:		Line 34:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Scenedesmus~~ obliquus]]	+	[[Category: Tetradesmus obliquus]]
-	[[Category: Huber, R]]	+	[[Category: Huber R]]
-	[[Category: Mann, K]]	+	[[Category: Mann K]]
-	[[Category: Reuter, W]]	+	[[Category: Reuter W]]
-	[[Category: Schnackenberg, J]]	+	[[Category: Schnackenberg J]]
-	[[Category: Than~~, M E~~]]	+	[[Category: Than ME]]
-	[[Category: Wiegand, G]]	+	[[Category: Wiegand G]]
-	~~[[Category: Cytochrome-c6]]~~	+
-	~~[[Category: Dimerization]]~~	+
-	~~[[Category: Electron transport]]~~	+
-	~~[[Category: Electron transport protein]]~~	+
-	~~[[Category: Oxidized state]]~~	+
-	~~[[Category: Photosynthesis~~]]	+

OCA at 10:33, 14 July 2021

2021-07-14T10:33:35Z

←Older revision		Revision as of 10:33, 14 July 2021
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	<StructureSection load='1c6o' size='340' side='right'caption='[[1c6o]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='1c6o' size='340' side='right'caption='[[1c6o]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Scenedesmus_obliquus Scenedesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1C6O FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Scenedesmus_obliquus Scenedesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C6O FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1c6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6o OCA], [~~http~~://pdbe.org/1c6o PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1c6o RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1c6o PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1c6o ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6o OCA], [https://pdbe.org/1c6o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c6o RCSB], [https://www.ebi.ac.uk/pdbsum/1c6o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c6o ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 07:05, 10 October 2019

2019-10-10T07:05:55Z

←Older revision		Revision as of 07:05, 10 October 2019
Line 1:		Line 1:

	==CRYSTAL STRUCTURE OF OXIDIZED CYTOCHROME C6 FROM THE GREEN ALGAE SCENEDESMUS OBLIQUUS==		==CRYSTAL STRUCTURE OF OXIDIZED CYTOCHROME C6 FROM THE GREEN ALGAE SCENEDESMUS OBLIQUUS==
-	<StructureSection load='1c6o' size='340' side='right' caption='[[1c6o]], [[Resolution\|resolution]] 2.00Å' scene=''>	+	<StructureSection load='1c6o' size='340' side='right'caption='[[1c6o]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Scenedesmus_obliquus Scenedesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C6O FirstGlance]. <br>		<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Scenedesmus_obliquus Scenedesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C6O FirstGlance]. <br>
Line 11:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c6/1c6o_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c6/1c6o_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 26:		Line 26:
	</div>		</div>
	<div class="pdbe-citations 1c6o" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1c6o" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Cytochrome C 3D structures\|Cytochrome C 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Scenedesmus obliquus]]		[[Category: Scenedesmus obliquus]]
	[[Category: Huber, R]]		[[Category: Huber, R]]

OCA at 08:04, 29 November 2017

2017-11-29T08:04:45Z

←Older revision		Revision as of 08:04, 29 November 2017
Line 1:		Line 1:
		+
	==CRYSTAL STRUCTURE OF OXIDIZED CYTOCHROME C6 FROM THE GREEN ALGAE SCENEDESMUS OBLIQUUS==		==CRYSTAL STRUCTURE OF OXIDIZED CYTOCHROME C6 FROM THE GREEN ALGAE SCENEDESMUS OBLIQUUS==
	<StructureSection load='1c6o' size='340' side='right' caption='[[1c6o]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='1c6o' size='340' side='right' caption='[[1c6o]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Acutodesmus_obliquus Acutodesmus~~ obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C6O FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Scenedesmus_obliquus Scenedesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C6O FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6o OCA], [http://pdbe.org/1c6o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1c6o RCSB], [http://www.ebi.ac.uk/pdbsum/1c6o PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6o OCA], [http://pdbe.org/1c6o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1c6o RCSB], [http://www.ebi.ac.uk/pdbsum/1c6o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1c6o ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 25:		Line 26:
	</div>		</div>
	<div class="pdbe-citations 1c6o" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1c6o" style="background-color:#fffaf0;"></div>
-
-	==See Also==
-	*[[Cytochrome c\|Cytochrome c]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Acutodesmus~~ obliquus]]	+	[[Category: Scenedesmus obliquus]]
	[[Category: Huber, R]]		[[Category: Huber, R]]
	[[Category: Mann, K]]		[[Category: Mann, K]]

OCA at 09:48, 9 February 2016

2016-02-09T09:48:06Z

←Older revision		Revision as of 09:48, 9 February 2016
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1c6o ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 21:01, 10 September 2015

2015-09-10T21:01:48Z

←Older revision		Revision as of 21:01, 10 September 2015
Line 4:		Line 4:
	<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acutodesmus_obliquus Acutodesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C6O FirstGlance]. <br>		<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acutodesmus_obliquus Acutodesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C6O FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6o OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1c6o RCSB], [http://www.ebi.ac.uk/pdbsum/1c6o PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6o OCA], [http://pdbe.org/1c6o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1c6o RCSB], [http://www.ebi.ac.uk/pdbsum/1c6o PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 24:		Line 24:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1c6o" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 10:59, 22 December 2014

2014-12-22T10:59:05Z

←Older revision		Revision as of 10:59, 22 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acutodesmus_obliquus Acutodesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C6O FirstGlance]. <br>		<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acutodesmus_obliquus Acutodesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C6O FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6o OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1c6o RCSB], [http://www.ebi.ac.uk/pdbsum/1c6o PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6o OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1c6o RCSB], [http://www.ebi.ac.uk/pdbsum/1c6o PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 32:
	</StructureSection>		</StructureSection>
	[[Category: Acutodesmus obliquus]]		[[Category: Acutodesmus obliquus]]
-	[[Category: Huber, R.]]	+	[[Category: Huber, R]]
-	[[Category: Mann, K.]]	+	[[Category: Mann, K]]
-	[[Category: Reuter, W.]]	+	[[Category: Reuter, W]]
-	[[Category: Schnackenberg, J.]]	+	[[Category: Schnackenberg, J]]
-	[[Category: Than, M E.]]	+	[[Category: Than, M E]]
-	[[Category: Wiegand, G.]]	+	[[Category: Wiegand, G]]
	[[Category: Cytochrome-c6]]		[[Category: Cytochrome-c6]]
	[[Category: Dimerization]]		[[Category: Dimerization]]

OCA at 16:56, 20 August 2014

2014-08-20T16:56:06Z

←Older revision		Revision as of 16:56, 20 August 2014
Line 1:		Line 1:
-	[[~~Image~~:1c6o.~~png\|left~~\|200px]]	+	==CRYSTAL STRUCTURE OF OXIDIZED CYTOCHROME C6 FROM THE GREEN ALGAE SCENEDESMUS OBLIQUUS==
		+	<StructureSection load='1c6o' size='340' side='right' caption='[[1c6o]], [[Resolution\|resolution]] 2.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1c6o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acutodesmus_obliquus Acutodesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1C6O FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene><br>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1c6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c6o OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1c6o RCSB], [http://www.ebi.ac.uk/pdbsum/1c6o PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c6/1c6o_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Cytochrome c6from the unicellular green alga Scenedesmus obliquus was sequenced, crystallized in its reduced and oxidized state and the three-dimensional structure of the protein in both redox states was determined by X-ray crystallography. Reduced cytochrome c6crystallized as a monomer in the space group P 21212, whereas the oxidized protein crystallized as a dimer in the space group P 3121. The structures were solved by molecular replacement and refined to 1. 9 and 2.0 A, respectively.Comparison of the structures of both redox states revealed only slight differences on the protein surface, whereas a distortion along the axis between the heme iron and its coordinating Met61 residue was observed. No redox-dependent movement of internal water molecules could be detected. The high degree of similarity of the surfaces and charge distributions of both redox states, as well as the dimerization of cytochrome c6as observed in the oxidized crystal, is discussed with respect to its biological relevance and its implications for the reaction mechanisms between cytochrome c6and its redox partners. The dimer of oxidized cytochrome c6may represent a molecular structure occurring in a binary complex with cytochrome b6f. This assembly might be required for the correct orientation of cytochrome c6with respect to its redox partner cytochrome b6f, facilitating the electron transfer within the complex. If the dimerization is not redox-dependent in vivo, the almost identical surfaces of both redox states do not support a long range differentiation between reduced and oxidized cyt c6, i.e. a random collision model for the formation of an electron transfer complex must be assumed.

-	~~{{STRUCTURE_1c6o\| PDB=1c6o \| SCENE= }}~~	+	Amino acid sequence, crystallization and structure determination of reduced and oxidized cytochrome c6 from the green alga Scenedesmus obliquus.,Schnackenberg J, Than ME, Mann K, Wiegand G, Huber R, Reuter W J Mol Biol. 1999 Jul 30;290(5):1019-30. PMID:10438600<ref>PMID:10438600</ref>

-	~~===CRYSTAL STRUCTURE OF OXIDIZED CYTOCHROME C6 FROM THE GREEN ALGAE SCENEDESMUS OBLIQUUS===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_10438600}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[1c6o]] is~~ a ~~2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Acutodesmus_obliquus Acutodesmus obliquus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA].~~	+

	==See Also==		==See Also==
	*[[Cytochrome c\|Cytochrome c]]		*[[Cytochrome c\|Cytochrome c]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:010438600<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Acutodesmus obliquus]]		[[Category: Acutodesmus obliquus]]
	[[Category: Huber, R.]]		[[Category: Huber, R.]]

OCA at 13:27, 20 October 2012

2012-10-20T13:27:54Z

←Older revision		Revision as of 13:27, 20 October 2012
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	==About this Structure==		==About this Structure==
-	[[1c6o]] is a 2 chain structure ~~of [[Cytochrome c]]~~ with sequence from [http://en.wikipedia.org/wiki/Acutodesmus_obliquus Acutodesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA].	+	[[1c6o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Acutodesmus_obliquus Acutodesmus obliquus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C6O OCA].

	==See Also==		==See Also==

OCA: Protected "1c6o" [edit=sysop:move=sysop]

2012-07-26T12:03:54Z

Protected "1c6o" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:03, 26 July 2012