1e5f - Revision history

OCA at 11:53, 13 December 2023

2023-12-13T11:53:05Z

←Older revision		Revision as of 11:53, 13 December 2023
Line 3:		Line 3:
	<StructureSection load='1e5f' size='340' side='right'caption='[[1e5f]], [[Resolution\|resolution]] 2.18Å' scene=''>		<StructureSection load='1e5f' size='340' side='right'caption='[[1e5f]], [[Resolution\|resolution]] 2.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1e5f]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Trichomonas_vaginalis_g3~~ Trichomonas vaginalis g3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=1E5F FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1e5f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichomonas_vaginalis_G3 Trichomonas vaginalis G3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E5F FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL~~-~~5-PHOSPHATE'>PLP</scene>~~, ~~<scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.18Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~>[[1e5e\|1e5e]]</td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~"><~~b>[[Gene\|Gene~~:~~]]</b~~></td><~~td class~~=~~"sblockDat">MGL1 ([http~~:~~//www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=~~5~~&id=412133 Trichomonas vaginalis G3])</td~~></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5f OCA], [https://pdbe.org/1e5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e5f RCSB], [https://www.ebi.ac.uk/pdbsum/1e5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e5f ProSAT]</span></td></tr>
-	<~~tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b></td><td class="sblockDat"><span class='plainlinks~~'>~~[http://en.wikipedia.org/wiki/Methionine_gamma-lyase Methionine gamma-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.11 4.4.1.11]~~ </~~span~~></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=1e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5f OCA], [~~http~~://pdbe.org/1e5f PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1e5f RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1e5f PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1e5f ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/O15564_TRIVA O15564_TRIVA]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 26:		Line 26:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Methionine gamma-lyase]]~~	+	[[Category: Trichomonas vaginalis G3]]
-	[[Category: Trichomonas vaginalis g3]]	+	[[Category: Coombs GH]]
-	[[Category: Coombs~~, G H~~]]	+	[[Category: Goodall G]]
-	[[Category: Goodall, G]]	+	[[Category: Lapthorn AJ]]
-	[[Category: Lapthorn~~, A J~~]]	+	[[Category: Mottram JC]]
-	[[Category: Mottram~~, J C]]~~	+
-	~~[[Category: C-s gamma lyase]]~~	+
-	~~[[Category: Lyase]]~~	+
-	~~[[Category: Methionine biosynthesis]]~~	+
-	~~[[Category: Plp-dependent enzyme~~]]	+

OCA at 10:22, 18 November 2020

2020-11-18T10:22:32Z

←Older revision		Revision as of 10:22, 18 November 2020
Line 1:		Line 1:

	==METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS==		==METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS==
-	<StructureSection load='1e5f' size='340' side='right' caption='[[1e5f]], [[Resolution\|resolution]] 2.18Å' scene=''>	+	<StructureSection load='1e5f' size='340' side='right'caption='[[1e5f]], [[Resolution\|resolution]] 2.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1e5f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis_g3 Trichomonas vaginalis g3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1E5F FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1e5f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis_g3 Trichomonas vaginalis g3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1E5F FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1e5e\|1e5e]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1e5e\|1e5e]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MGL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=412133 Trichomonas vaginalis G3])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MGL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=412133 Trichomonas vaginalis G3])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methionine_gamma-lyase Methionine gamma-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.11 4.4.1.11] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methionine_gamma-lyase Methionine gamma-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.11 4.4.1.11] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5f OCA], [http://pdbe.org/1e5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1e5f RCSB], [http://www.ebi.ac.uk/pdbsum/1e5f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1e5f ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5f OCA], [http://pdbe.org/1e5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1e5f RCSB], [http://www.ebi.ac.uk/pdbsum/1e5f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1e5f ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 20:		Line 20:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e5f ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e5f ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+
		+	==See Also==
		+	*[[Methionine gamma-lyase 3D structures\|Methionine gamma-lyase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Methionine gamma-lyase]]		[[Category: Methionine gamma-lyase]]
	[[Category: Trichomonas vaginalis g3]]		[[Category: Trichomonas vaginalis g3]]

OCA at 07:59, 13 December 2017

2017-12-13T07:59:42Z

←Older revision		Revision as of 07:59, 13 December 2017
Line 1:		Line 1:
		+
	==METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS==		==METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS==
	<StructureSection load='1e5f' size='340' side='right' caption='[[1e5f]], [[Resolution\|resolution]] 2.18Å' scene=''>		<StructureSection load='1e5f' size='340' side='right' caption='[[1e5f]], [[Resolution\|resolution]] 2.18Å' scene=''>
Line 7:		Line 8:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MGL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=412133 Trichomonas vaginalis G3])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MGL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=412133 Trichomonas vaginalis G3])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methionine_gamma-lyase Methionine gamma-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.11 4.4.1.11] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methionine_gamma-lyase Methionine gamma-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.11 4.4.1.11] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5f OCA], [http://pdbe.org/1e5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1e5f RCSB], [http://www.ebi.ac.uk/pdbsum/1e5f PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5f OCA], [http://pdbe.org/1e5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1e5f RCSB], [http://www.ebi.ac.uk/pdbsum/1e5f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1e5f ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 13:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/1e5f_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/1e5f_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 19:		Line 20:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e5f ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e5f ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-
-	==See Also==
-	*[[Methionine gamma-lyase\|Methionine gamma-lyase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 19:24, 9 February 2016

2016-02-09T19:24:01Z

←Older revision		Revision as of 19:24, 9 February 2016
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e5f ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 01:19, 11 September 2015

2015-09-11T01:19:57Z

←Older revision		Revision as of 01:19, 11 September 2015
Line 7:		Line 7:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MGL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=412133 Trichomonas vaginalis G3])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MGL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=412133 Trichomonas vaginalis G3])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methionine_gamma-lyase Methionine gamma-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.11 4.4.1.11] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methionine_gamma-lyase Methionine gamma-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.11 4.4.1.11] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5f OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1e5f RCSB], [http://www.ebi.ac.uk/pdbsum/1e5f PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5f OCA], [http://pdbe.org/1e5f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1e5f RCSB], [http://www.ebi.ac.uk/pdbsum/1e5f PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 19:		Line 19:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+
		+	==See Also==
		+	*[[Methionine gamma-lyase\|Methionine gamma-lyase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 21:35, 22 December 2014

2014-12-22T21:35:29Z

←Older revision		Revision as of 21:35, 22 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1e5f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis_g3 Trichomonas vaginalis g3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1E5F FirstGlance]. <br>		<table><tr><td colspan='2'>[[1e5f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis_g3 Trichomonas vaginalis g3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1E5F FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1e5e\|1e5e]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1e5e\|1e5e]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MGL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=412133 Trichomonas vaginalis G3])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MGL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=412133 Trichomonas vaginalis G3])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methionine_gamma-lyase Methionine gamma-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.11 4.4.1.11] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methionine_gamma-lyase Methionine gamma-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.11 4.4.1.11] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5f OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1e5f RCSB], [http://www.ebi.ac.uk/pdbsum/1e5f PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5f OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1e5f RCSB], [http://www.ebi.ac.uk/pdbsum/1e5f PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 23:
	[[Category: Methionine gamma-lyase]]		[[Category: Methionine gamma-lyase]]
	[[Category: Trichomonas vaginalis g3]]		[[Category: Trichomonas vaginalis g3]]
-	[[Category: Coombs, G H.]]	+	[[Category: Coombs, G H]]
-	[[Category: Goodall, G.]]	+	[[Category: Goodall, G]]
-	[[Category: Lapthorn, A J.]]	+	[[Category: Lapthorn, A J]]
-	[[Category: Mottram, J C.]]	+	[[Category: Mottram, J C]]
	[[Category: C-s gamma lyase]]		[[Category: C-s gamma lyase]]
	[[Category: Lyase]]		[[Category: Lyase]]
	[[Category: Methionine biosynthesis]]		[[Category: Methionine biosynthesis]]
	[[Category: Plp-dependent enzyme]]		[[Category: Plp-dependent enzyme]]

OCA at 10:51, 10 September 2014

2014-09-10T10:51:28Z

←Older revision		Revision as of 10:51, 10 September 2014
Line 1:		Line 1:
-	~~[[Image:1e5f.png\|left\|200px]]~~	+	==METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS==
-		+	<StructureSection load='1e5f' size='340' side='right' caption='[[1e5f]], [[Resolution\|resolution]] 2.18Å' scene=''>
-	~~{{STRUCTURE_1e5f\| PDB=1e5f \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1e5f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis_g3 Trichomonas vaginalis g3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1E5F FirstGlance]. <br>
-	===METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1e5e\|1e5e]]</td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">MGL1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=412133 Trichomonas vaginalis G3])</td></tr>
-	==~~About this Structure~~==	+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methionine_gamma-lyase Methionine gamma-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.4.1.11 4.4.1.11] </span></td></tr>
-	[[1e5f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis_g3 Trichomonas vaginalis g3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA].	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5f OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1e5f RCSB], [http://www.ebi.ac.uk/pdbsum/1e5f PDBsum]</span></td></tr>
-		+	<table>
-	==~~Reference~~==	+	== Evolutionary Conservation ==
-	<~~ref group~~="~~xtra~~">~~PMID~~:~~017012806~~</~~ref~~><~~references group~~="~~xtra~~"/>	+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/1e5f_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Methionine gamma-lyase]]		[[Category: Methionine gamma-lyase]]
	[[Category: Trichomonas vaginalis g3]]		[[Category: Trichomonas vaginalis g3]]

OCA at 07:01, 14 November 2012

2012-11-14T07:01:38Z

←Older revision		Revision as of 07:01, 14 November 2012
Line 1:		Line 1:
	[[Image:1e5f.png\|left\|200px]]		[[Image:1e5f.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1e5f", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1e5f\| PDB=1e5f \| SCENE= }}		{{STRUCTURE_1e5f\| PDB=1e5f \| SCENE= }}

	===METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS===		===METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_017012806}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 017012806 is the PubMed ID number.
-	-->
-	{{ABSTRACT_PUBMED_017012806}}

	==About this Structure==		==About this Structure==
-	[[1e5f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Trichomonas_vaginalis~~ Trichomonas vaginalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA].	+	[[1e5f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis_g3 Trichomonas vaginalis g3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA].

	==Reference==		==Reference==
	<ref group="xtra">PMID:017012806</ref><references group="xtra"/>		<ref group="xtra">PMID:017012806</ref><references group="xtra"/>
	[[Category: Methionine gamma-lyase]]		[[Category: Methionine gamma-lyase]]
-	[[Category: Trichomonas vaginalis]]	+	[[Category: Trichomonas vaginalis g3]]
	[[Category: Coombs, G H.]]		[[Category: Coombs, G H.]]
	[[Category: Goodall, G.]]		[[Category: Goodall, G.]]

OCA: Protected "1e5f" [edit=sysop:move=sysop]

2011-08-31T05:50:47Z

Protected "1e5f" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:50, 31 August 2011

OCA at 05:50, 31 August 2011

2011-08-31T05:50:45Z

←Older revision		Revision as of 05:50, 31 August 2011
Line 1:		Line 1:
-	{{Seed}}
	[[Image:1e5f.png\|left\|200px]]		[[Image:1e5f.png\|left\|200px]]

Line 12:		Line 11:
	===METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS===		===METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_017012806}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 017012806 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_017012806}}

	==About this Structure==		==About this Structure==
-	~~1E5F~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis Trichomonas vaginalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA].	+	[[1e5f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis Trichomonas vaginalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5F OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:017012806</ref><references group="xtra"/>
	[[Category: Methionine gamma-lyase]]		[[Category: Methionine gamma-lyase]]
	[[Category: Trichomonas vaginalis]]		[[Category: Trichomonas vaginalis]]
Line 22:		Line 30:
	[[Category: Mottram, J C.]]		[[Category: Mottram, J C.]]
	[[Category: C-s gamma lyase]]		[[Category: C-s gamma lyase]]
		+	[[Category: Lyase]]
		+	[[Category: Methionine biosynthesis]]
	[[Category: Plp-dependent enzyme]]		[[Category: Plp-dependent enzyme]]
-	[[Category: Trichomonas vaginali]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 12:10:55 2009''