1gh1 - Revision history

OCA at 23:31, 27 December 2023

2023-12-27T23:31:38Z

←Older revision		Revision as of 23:31, 27 December 2023
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	==NMR STRUCTURES OF WHEAT NONSPECIFIC LIPID TRANSFER PROTEIN==		==NMR STRUCTURES OF WHEAT NONSPECIFIC LIPID TRANSFER PROTEIN==
-	<StructureSection load='1gh1' size='340' side='right'caption='[[1gh1~~]], [[NMR_Ensembles_of_Models \| 15 NMR models~~]]' scene=''>	+	<StructureSection load='1gh1' size='340' side='right'caption='[[1gh1]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style~~='overflow: auto; max-height: 3em;'>[[1cz2\|1cz2]], [[1bwo\|1bwo]], [[1azh\|1azh]], [[1mzl\|1mzl]], [[1afh\|1afh]], [[1mzm\|1mzm]], [[1lip\|1lip]], [[1jtb\|1jtb]], [[1be2\|1be2]], [[1bv2\|1bv2]], [[1rzl\|1rzl]]</div></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [https://pdbe.org/1gh1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [https://www.ebi.ac.uk/pdbsum/1gh1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gh1 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [https://pdbe.org/1gh1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [https://www.ebi.ac.uk/pdbsum/1gh1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gh1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/NLTP1_WHEAT NLTP1_WHEAT]] Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	+	[https://www.uniprot.org/uniprot/NLTP1_WHEAT NLTP1_WHEAT] Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Triticum aestivum]]		[[Category: Triticum aestivum]]
-	[[Category: Caille, A]]	+	[[Category: Caille A]]
-	[[Category: Gincel, E]]	+	[[Category: Gincel E]]
-	[[Category: Marion, D]]	+	[[Category: Marion D]]
-	[[Category: Ptak, M]]	+	[[Category: Ptak M]]
-	[[Category: Simorre~~, J P~~]]	+	[[Category: Simorre JP]]
-	[[Category: Vovelle, F]]	+	[[Category: Vovelle F]]
-	~~[[Category: 4-helix winding]]~~	+
-	~~[[Category: Lipid binding protein~~]]	+

OCA at 09:51, 26 May 2021

2021-05-26T09:51:02Z

←Older revision		Revision as of 09:51, 26 May 2021
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	<StructureSection load='1gh1' size='340' side='right'caption='[[1gh1]], [[NMR_Ensembles_of_Models \| 15 NMR models]]' scene=''>		<StructureSection load='1gh1' size='340' side='right'caption='[[1gh1]], [[NMR_Ensembles_of_Models \| 15 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cz2\|1cz2]], [[1bwo\|1bwo]], [[1azh\|1azh]], [[1mzl\|1mzl]], [[1afh\|1afh]], [[1mzm\|1mzm]], [[1lip\|1lip]], [[1jtb\|1jtb]], [[1be2\|1be2]], [[1bv2\|1bv2]], [[1rzl\|1rzl]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1cz2\|1cz2]], [[1bwo\|1bwo]], [[1azh\|1azh]], [[1mzl\|1mzl]], [[1afh\|1afh]], [[1mzm\|1mzm]], [[1lip\|1lip]], [[1jtb\|1jtb]], [[1be2\|1be2]], [[1bv2\|1bv2]], [[1rzl\|1rzl]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [~~http~~://pdbe.org/1gh1 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1gh1 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1gh1 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [https://pdbe.org/1gh1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [https://www.ebi.ac.uk/pdbsum/1gh1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gh1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/NLTP1_WHEAT NLTP1_WHEAT]] Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.	+	[[https://www.uniprot.org/uniprot/NLTP1_WHEAT NLTP1_WHEAT]] Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 07:06, 21 August 2019

2019-08-21T07:06:46Z

←Older revision		Revision as of 07:06, 21 August 2019
Line 1:		Line 1:

	==NMR STRUCTURES OF WHEAT NONSPECIFIC LIPID TRANSFER PROTEIN==		==NMR STRUCTURES OF WHEAT NONSPECIFIC LIPID TRANSFER PROTEIN==
-	<StructureSection load='1gh1' size='340' side='right' caption='[[1gh1]], [[NMR_Ensembles_of_Models \| 15 NMR models]]' scene=''>	+	<StructureSection load='1gh1' size='340' side='right'caption='[[1gh1]], [[NMR_Ensembles_of_Models \| 15 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>
Line 13:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gh/1gh1_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gh/1gh1_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 32:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Triticum aestivum]]		[[Category: Triticum aestivum]]
	[[Category: Caille, A]]		[[Category: Caille, A]]

OCA at 07:44, 15 November 2017

2017-11-15T07:44:31Z

←Older revision		Revision as of 07:44, 15 November 2017
Line 1:		Line 1:
		+
	==NMR STRUCTURES OF WHEAT NONSPECIFIC LIPID TRANSFER PROTEIN==		==NMR STRUCTURES OF WHEAT NONSPECIFIC LIPID TRANSFER PROTEIN==
	<StructureSection load='1gh1' size='340' side='right' caption='[[1gh1]], [[NMR_Ensembles_of_Models \| 15 NMR models]]' scene=''>		<StructureSection load='1gh1' size='340' side='right' caption='[[1gh1]], [[NMR_Ensembles_of_Models \| 15 NMR models]]' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cz2\|1cz2]], [[1bwo\|1bwo]], [[1azh\|1azh]], [[1mzl\|1mzl]], [[1afh\|1afh]], [[1mzm\|1mzm]], [[1lip\|1lip]], [[1jtb\|1jtb]], [[1be2\|1be2]], [[1bv2\|1bv2]], [[1rzl\|1rzl]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cz2\|1cz2]], [[1bwo\|1bwo]], [[1azh\|1azh]], [[1mzl\|1mzl]], [[1afh\|1afh]], [[1mzm\|1mzm]], [[1lip\|1lip]], [[1jtb\|1jtb]], [[1be2\|1be2]], [[1bv2\|1bv2]], [[1rzl\|1rzl]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [http://pdbe.org/1gh1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [http://www.ebi.ac.uk/pdbsum/1gh1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [http://pdbe.org/1gh1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [http://www.ebi.ac.uk/pdbsum/1gh1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1gh1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 12:37, 9 February 2016

2016-02-09T12:37:19Z

←Older revision		Revision as of 12:37, 9 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gh1 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 22:19, 10 September 2015

2015-09-10T22:19:25Z

←Older revision		Revision as of 22:19, 10 September 2015
Line 4:		Line 4:
	<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cz2\|1cz2]], [[1bwo\|1bwo]], [[1azh\|1azh]], [[1mzl\|1mzl]], [[1afh\|1afh]], [[1mzm\|1mzm]], [[1lip\|1lip]], [[1jtb\|1jtb]], [[1be2\|1be2]], [[1bv2\|1bv2]], [[1rzl\|1rzl]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cz2\|1cz2]], [[1bwo\|1bwo]], [[1azh\|1azh]], [[1mzl\|1mzl]], [[1afh\|1afh]], [[1mzm\|1mzm]], [[1lip\|1lip]], [[1jtb\|1jtb]], [[1be2\|1be2]], [[1bv2\|1bv2]], [[1rzl\|1rzl]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [http://www.ebi.ac.uk/pdbsum/1gh1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [http://pdbe.org/1gh1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [http://www.ebi.ac.uk/pdbsum/1gh1 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1gh1" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 06:52, 25 December 2014

2014-12-25T06:52:08Z

←Older revision		Revision as of 06:52, 25 December 2014
Line 6:		Line 6:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [http://www.ebi.ac.uk/pdbsum/1gh1 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [http://www.ebi.ac.uk/pdbsum/1gh1 PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/NLTP1_WHEAT NLTP1_WHEAT]] Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 18:16, 22 December 2014

2014-12-22T18:16:36Z

←Older revision		Revision as of 18:16, 22 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cz2\|1cz2]], [[1bwo\|1bwo]], [[1azh\|1azh]], [[1mzl\|1mzl]], [[1afh\|1afh]], [[1mzm\|1mzm]], [[1lip\|1lip]], [[1jtb\|1jtb]], [[1be2\|1be2]], [[1bv2\|1bv2]], [[1rzl\|1rzl]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cz2\|1cz2]], [[1bwo\|1bwo]], [[1azh\|1azh]], [[1mzl\|1mzl]], [[1afh\|1afh]], [[1mzm\|1mzm]], [[1lip\|1lip]], [[1jtb\|1jtb]], [[1be2\|1be2]], [[1bv2\|1bv2]], [[1rzl\|1rzl]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [http://www.ebi.ac.uk/pdbsum/1gh1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [http://www.ebi.ac.uk/pdbsum/1gh1 PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 29:		Line 29:
	</StructureSection>		</StructureSection>
	[[Category: Triticum aestivum]]		[[Category: Triticum aestivum]]
-	[[Category: Caille, A.]]	+	[[Category: Caille, A]]
-	[[Category: Gincel, E.]]	+	[[Category: Gincel, E]]
-	[[Category: Marion, D.]]	+	[[Category: Marion, D]]
-	[[Category: Ptak, M.]]	+	[[Category: Ptak, M]]
-	[[Category: Simorre, J P.]]	+	[[Category: Simorre, J P]]
-	[[Category: Vovelle, F.]]	+	[[Category: Vovelle, F]]
	[[Category: 4-helix winding]]		[[Category: 4-helix winding]]
	[[Category: Lipid binding protein]]		[[Category: Lipid binding protein]]

OCA at 08:20, 28 September 2014

2014-09-28T08:20:28Z

←Older revision		Revision as of 08:20, 28 September 2014
Line 1:		Line 1:
-	[[~~Image:~~1gh1.~~png~~\|~~left~~\|200px]]	+	==NMR STRUCTURES OF WHEAT NONSPECIFIC LIPID TRANSFER PROTEIN==
		+	<StructureSection load='1gh1' size='340' side='right' caption='[[1gh1]], [[NMR_Ensembles_of_Models \| 15 NMR models]]' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1gh1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GH1 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cz2\|1cz2]], [[1bwo\|1bwo]], [[1azh\|1azh]], [[1mzl\|1mzl]], [[1afh\|1afh]], [[1mzm\|1mzm]], [[1lip\|1lip]], [[1jtb\|1jtb]], [[1be2\|1be2]], [[1bv2\|1bv2]], [[1rzl\|1rzl]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gh1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gh1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1gh1 RCSB], [http://www.ebi.ac.uk/pdbsum/1gh1 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gh/1gh1_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Two-dimensional and three-dimensional 1H-NMR experimental data [Simorre, J. P., Caille, A., Marion, D., Marion, D. & Ptak, M. (1991) Biochemistry 30, 11600-11608] were used to build models of the three-dimensional structure of a non-specific wheat lipid-transfer protein (LTP) by using distance geometry, simulated annealing, energy minimization and molecular dynamics techniques. A first set of 881 distance constraints derived from NOE cross-peak intensities was used to generate 74 initial structures. One family of topological mirror images of the protein structure was eliminated by considering helical secondary-structure organization and steric requirements. Back calculations of NOE intensities led us to introduce 535 additional distance constraints. Finally, 21 structures were selected as representative of the structure of the protein. The polypeptide backbone folds into a simple and original right-handed winding. It is composed of a bundle of four helices linked by flexible loops, which is packed against a C-terminal fragment forming a non-standard saxophone-like shape. The folded protein is stabilized by hydrophobic interactions and the four disulfide bridges combined by pairs on each side of the protein. An hydrophobic cleft, formed by residues located in the second half of the protein could be a potential site for the binding of lipids.

-	~~{{STRUCTURE_1gh1\| PDB=1gh1 \| SCENE= }}~~	+	Three-dimensional structure in solution of a wheat lipid-transfer protein from multidimensional 1H-NMR data. A new folding for lipid carriers.,Gincel E, Simorre JP, Caille A, Marion D, Ptak M, Vovelle F Eur J Biochem. 1994 Dec 1;226(2):413-22. PMID:8001559<ref>PMID:8001559</ref>

-	~~===NMR STRUCTURES OF WHEAT NONSPECIFIC LIPID TRANSFER PROTEIN===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_8001559}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1gh1]] is~~ a ~~1 chain structure with sequence from [http://en.wikipedia.org/wiki/Triticum_aestivum Triticum aestivum]. This structure supersedes~~ the ~~now removed PDB entry [http://oca~~.~~weizmann~~.ac.il/~~oca-bin/send-pdb?obs=1&id=1lpt 1lpt]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GH1 OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:008001559<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Triticum aestivum]]		[[Category: Triticum aestivum]]
	[[Category: Caille, A.]]		[[Category: Caille, A.]]

OCA: Protected "1gh1" [edit=sysop:move=sysop]

2012-11-21T15:32:49Z

Protected "1gh1" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:32, 21 November 2012