1ise - Revision history

OCA at 23:36, 27 December 2023

2023-12-27T23:36:11Z

←Older revision		Revision as of 23:36, 27 December 2023
Line 3:		Line 3:
	<StructureSection load='1ise' size='340' side='right'caption='[[1ise]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='1ise' size='340' side='right'caption='[[1ise]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ise]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"bacillus_coli"_migula_1895 "bacillus~~ coli~~" migula 1895~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ISE FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ise]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ISE FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[1ek8\|1ek8]]</div></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.2Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">frr ([https://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=562 "Bacillus coli" Migula 1895])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [https://pdbe.org/1ise PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [https://www.ebi.ac.uk/pdbsum/1ise PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ise ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [https://pdbe.org/1ise PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [https://www.ebi.ac.uk/pdbsum/1ise PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ise ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/RRF_ECOLI RRF_ECOLI]] Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.[HAMAP-Rule:MF_00040]	+	[https://www.uniprot.org/uniprot/RRF_ECOLI RRF_ECOLI] Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.[HAMAP-Rule:MF_00040]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 25:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus~~ coli ~~migula 1895~~]]	+	[[Category: Escherichia coli]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Kato, H]]	+	[[Category: Kato H]]
-	[[Category: Kobayashi, Y]]	+	[[Category: Kobayashi Y]]
-	[[Category: Nakano, H]]	+	[[Category: Nakano H]]
-	[[Category: Nishina, K]]	+	[[Category: Nishina K]]
-	[[Category: Ohkubo, T]]	+	[[Category: Ohkubo T]]
-	[[Category: Oka, S]]	+	[[Category: Oka S]]
-	[[Category: Uchiyama, S]]	+	[[Category: Uchiyama S]]
-	[[Category: Yamagata, Y]]	+	[[Category: Yamagata Y]]
-	[[Category: Yoshida, T]]	+	[[Category: Yoshida T]]
-	~~[[Category: Translation~~]]	+

OCA at 06:20, 10 November 2021

2021-11-10T06:20:21Z

←Older revision		Revision as of 06:20, 10 November 2021
Line 3:		Line 3:
	<StructureSection load='1ise' size='340' side='right'caption='[[1ise]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='1ise' size='340' side='right'caption='[[1ise]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ise]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=1ISE FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ise]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ISE FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ek8\|1ek8]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1ek8\|1ek8]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">frr ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">frr ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [~~http~~://pdbe.org/1ise PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1ise PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1ise ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [https://pdbe.org/1ise PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [https://www.ebi.ac.uk/pdbsum/1ise PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ise ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/RRF_ECOLI RRF_ECOLI]] Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.[HAMAP-Rule:MF_00040]	+	[[https://www.uniprot.org/uniprot/RRF_ECOLI RRF_ECOLI]] Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.[HAMAP-Rule:MF_00040]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 10:41, 18 November 2020

2020-11-18T10:41:03Z

←Older revision		Revision as of 10:41, 18 November 2020
Line 1:		Line 1:

	==Crystal structure of a mutant of ribosome recycling factor from Escherichia coli, Arg132Gly==		==Crystal structure of a mutant of ribosome recycling factor from Escherichia coli, Arg132Gly==
-	<StructureSection load='1ise' size='340' side='right' caption='[[1ise]], [[Resolution\|resolution]] 2.20Å' scene=''>	+	<StructureSection load='1ise' size='340' side='right'caption='[[1ise]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ise]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1ISE FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ise]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1ISE FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ek8\|1ek8]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ek8\|1ek8]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">frr ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">frr ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [http://pdbe.org/1ise PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [http://www.ebi.ac.uk/pdbsum/1ise PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ise ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [http://pdbe.org/1ise PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [http://www.ebi.ac.uk/pdbsum/1ise PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ise ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 20:		Line 20:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ise ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ise ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+
		+	==See Also==
		+	*[[Ribosome recycling factor\|Ribosome recycling factor]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Bacillus coli migula 1895]]		[[Category: Bacillus coli migula 1895]]
		+	[[Category: Large Structures]]
	[[Category: Kato, H]]		[[Category: Kato, H]]
	[[Category: Kobayashi, Y]]		[[Category: Kobayashi, Y]]

OCA at 08:43, 17 January 2018

2018-01-17T08:43:10Z

←Older revision		Revision as of 08:43, 17 January 2018
Line 1:		Line 1:
		+
	==Crystal structure of a mutant of ribosome recycling factor from Escherichia coli, Arg132Gly==		==Crystal structure of a mutant of ribosome recycling factor from Escherichia coli, Arg132Gly==
	<StructureSection load='1ise' size='340' side='right' caption='[[1ise]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='1ise' size='340' side='right' caption='[[1ise]], [[Resolution\|resolution]] 2.20Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ek8\|1ek8]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ek8\|1ek8]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">frr ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">frr ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [http://pdbe.org/1ise PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [http://www.ebi.ac.uk/pdbsum/1ise PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [http://pdbe.org/1ise PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [http://www.ebi.ac.uk/pdbsum/1ise PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ise ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/is/1ise_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/is/1ise_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 19:		Line 20:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ise ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ise ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-
-	==See Also==
-	*[[Ribosome recycling factor\|Ribosome recycling factor]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 20:04, 9 February 2016

2016-02-09T20:04:07Z

←Older revision		Revision as of 20:04, 9 February 2016
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ise ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 01:34, 11 September 2015

2015-09-11T01:34:54Z

←Older revision		Revision as of 01:34, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1ise' size='340' side='right' caption='[[1ise]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='1ise' size='340' side='right' caption='[[1ise]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ise]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia~~ coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ISE FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ise]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ISE FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ek8\|1ek8]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ek8\|1ek8]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">frr ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 ~~Escherichia~~ coli])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">frr ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [http://www.ebi.ac.uk/pdbsum/1ise PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [http://pdbe.org/1ise PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [http://www.ebi.ac.uk/pdbsum/1ise PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 19:		Line 19:
	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+
		+	==See Also==
		+	*[[Ribosome recycling factor\|Ribosome recycling factor]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia~~ coli]]	+	[[Category: Bacillus coli migula 1895]]
	[[Category: Kato, H]]		[[Category: Kato, H]]
	[[Category: Kobayashi, Y]]		[[Category: Kobayashi, Y]]

OCA at 09:12, 25 December 2014

2014-12-25T09:12:23Z

←Older revision		Revision as of 09:12, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1ise]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ISE FirstGlance]. <br>		<table><tr><td colspan='2'>[[1ise]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ISE FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ek8\|1ek8]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ek8\|1ek8]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">frr ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">frr ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [http://www.ebi.ac.uk/pdbsum/1ise PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [http://www.ebi.ac.uk/pdbsum/1ise PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/RRF_ECOLI RRF_ECOLI]] Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another.[HAMAP-Rule:MF_00040]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Kato, H.]]	+	[[Category: Kato, H]]
-	[[Category: Kobayashi, Y.]]	+	[[Category: Kobayashi, Y]]
-	[[Category: Nakano, H.]]	+	[[Category: Nakano, H]]
-	[[Category: Nishina, K.]]	+	[[Category: Nishina, K]]
-	[[Category: Ohkubo, T.]]	+	[[Category: Ohkubo, T]]
-	[[Category: Oka, S.]]	+	[[Category: Oka, S]]
-	[[Category: Uchiyama, S.]]	+	[[Category: Uchiyama, S]]
-	[[Category: Yamagata, Y.]]	+	[[Category: Yamagata, Y]]
-	[[Category: Yoshida, T.]]	+	[[Category: Yoshida, T]]
	[[Category: Translation]]		[[Category: Translation]]

OCA at 11:41, 28 September 2014

2014-09-28T11:41:59Z

←Older revision		Revision as of 11:41, 28 September 2014
Line 1:		Line 1:
-	~~[[Image:1ise.png\|left\|200px]]~~	+	==Crystal structure of a mutant of ribosome recycling factor from Escherichia coli, Arg132Gly==
-		+	<StructureSection load='1ise' size='340' side='right' caption='[[1ise]], [[Resolution\|resolution]] 2.20Å' scene=''>
-	~~{{STRUCTURE_1ise\| PDB=1ise \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1ise]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ISE FirstGlance]. <br>
-	===Crystal structure of a mutant of ribosome recycling factor from Escherichia coli, Arg132Gly===	+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ek8\|1ek8]]</td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">frr ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ise FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ise OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ise RCSB], [http://www.ebi.ac.uk/pdbsum/1ise PDBsum]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[1ise]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/is/1ise_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Kato, H.]]		[[Category: Kato, H.]]

OCA: Protected "1ise" [edit=sysop:move=sysop]

2012-11-28T14:57:02Z

Protected "1ise" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:57, 28 November 2012

OCA at 14:56, 28 November 2012

2012-11-28T14:56:59Z

←Older revision		Revision as of 14:56, 28 November 2012
Line 1:		Line 1:
-	{{Seed}}
	[[Image:1ise.png\|left\|200px]]		[[Image:1ise.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1ise", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1ise\| PDB=1ise \| SCENE= }}		{{STRUCTURE_1ise\| PDB=1ise \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~1ISE~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA].	+	[[1ise]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ISE OCA].
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Kato, H.]]		[[Category: Kato, H.]]
Line 26:		Line 19:
	[[Category: Yoshida, T.]]		[[Category: Yoshida, T.]]
	[[Category: Translation]]		[[Category: Translation]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 12:23:02 2009''