1k77 - Revision history

OCA at 07:58, 3 April 2024

2024-04-03T07:58:20Z

←Older revision		Revision as of 07:58, 3 April 2024
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	<StructureSection load='1k77' size='340' side='right'caption='[[1k77]], [[Resolution\|resolution]] 1.63Å' scene=''>		<StructureSection load='1k77' size='340' side='right'caption='[[1k77]], [[Resolution\|resolution]] 1.63Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1k77]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"bacillus_coli"_migula_1895 "bacillus~~ coli~~" migula 1895~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K77 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1k77]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K77 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.63Å</td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k77 OCA], [https://pdbe.org/1k77 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k77 RCSB], [https://www.ebi.ac.uk/pdbsum/1k77 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k77 ProSAT], [https://www.topsan.org/Proteins/MCSG/1k77 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k77 OCA], [https://pdbe.org/1k77 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k77 RCSB], [https://www.ebi.ac.uk/pdbsum/1k77 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k77 ProSAT], [https://www.topsan.org/Proteins/MCSG/1k77 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/~~YGBM_ECOLI YGBM_ECOLI]~~] Catalyzes the ~~reversible~~ isomerization ~~between hydroxypyruvate and~~ 2-~~hydroxy~~-3-~~oxopropanoate (also termed tartronate semialdehyde) (By similarity)~~.	+	[https://www.uniprot.org/uniprot/OTNI_ECOLI OTNI_ECOLI] Catalyzes the isomerization of 2-oxo-tetronate to 3-oxo-tetronate.[UniProtKB:Q57151]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus~~ coli ~~migula 1895~~]]	+	[[Category: Escherichia coli]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Arrowsmith~~, C H~~]]	+	[[Category: Arrowsmith CH]]
-	[[Category: Beasley, S]]	+	[[Category: Beasley S]]
-	[[Category: Edwards~~, A M~~]]	+	[[Category: Edwards AM]]
-	[[Category: Joachimiak, A]]	+	[[Category: Joachimiak A]]
-	[[Category: Kim, Y]]	+	[[Category: Kim Y]]
-	[[Category: Laskowski, R]]	+	[[Category: Laskowski R]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Savchenko A]]
-	[[Category: Savchenko, A]]	+	[[Category: Skarina T]]
-	[[Category: Skarina, T]]	+
-	~~[[Category: Hypothetical protein]]~~	+
-	~~[[Category: Mcsg]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Tim barrel]]~~	+
-	~~[[Category: Unknown function~~]]	+

OCA at 06:50, 11 August 2021

2021-08-11T06:50:04Z

←Older revision		Revision as of 06:50, 11 August 2021
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	<StructureSection load='1k77' size='340' side='right'caption='[[1k77]], [[Resolution\|resolution]] 1.63Å' scene=''>		<StructureSection load='1k77' size='340' side='right'caption='[[1k77]], [[Resolution\|resolution]] 1.63Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1k77]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1K77 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1k77]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K77 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1k77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k77 OCA], [~~http~~://pdbe.org/1k77 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1k77 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1k77 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1k77 ProSAT], [~~http~~://www.topsan.org/Proteins/MCSG/1k77 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k77 OCA], [https://pdbe.org/1k77 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k77 RCSB], [https://www.ebi.ac.uk/pdbsum/1k77 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k77 ProSAT], [https://www.topsan.org/Proteins/MCSG/1k77 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/YGBM_ECOLI YGBM_ECOLI]] Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) (By similarity).	+	[[https://www.uniprot.org/uniprot/YGBM_ECOLI YGBM_ECOLI]] Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 09:37, 6 November 2019

2019-11-06T09:37:26Z

←Older revision		Revision as of 09:37, 6 November 2019
Line 1:		Line 1:

	==Crystal Structure of EC1530, a Putative Oxygenase from Escherichia coli==		==Crystal Structure of EC1530, a Putative Oxygenase from Escherichia coli==
-	<StructureSection load='1k77' size='340' side='right' caption='[[1k77]], [[Resolution\|resolution]] 1.63Å' scene=''>	+	<StructureSection load='1k77' size='340' side='right'caption='[[1k77]], [[Resolution\|resolution]] 1.63Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1k77]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1K77 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1k77]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1K77 FirstGlance]. <br>
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Bacillus coli migula 1895]]		[[Category: Bacillus coli migula 1895]]
		+	[[Category: Large Structures]]
	[[Category: Arrowsmith, C H]]		[[Category: Arrowsmith, C H]]
	[[Category: Beasley, S]]		[[Category: Beasley, S]]

OCA at 21:43, 24 January 2018

2018-01-24T21:43:30Z

←Older revision		Revision as of 21:43, 24 January 2018
Line 1:		Line 1:
		+
	==Crystal Structure of EC1530, a Putative Oxygenase from Escherichia coli==		==Crystal Structure of EC1530, a Putative Oxygenase from Escherichia coli==
	<StructureSection load='1k77' size='340' side='right' caption='[[1k77]], [[Resolution\|resolution]] 1.63Å' scene=''>		<StructureSection load='1k77' size='340' side='right' caption='[[1k77]], [[Resolution\|resolution]] 1.63Å' scene=''>
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	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1k77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k77 OCA], [http://pdbe.org/1k77 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1k77 RCSB], [http://www.ebi.ac.uk/pdbsum/1k77 PDBsum], [http://www.topsan.org/Proteins/MCSG/1k77 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1k77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k77 OCA], [http://pdbe.org/1k77 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1k77 RCSB], [http://www.ebi.ac.uk/pdbsum/1k77 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1k77 ProSAT], [http://www.topsan.org/Proteins/MCSG/1k77 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k7/1k77_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k7/1k77_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 00:03, 9 February 2016

2016-02-09T00:03:40Z

←Older revision		Revision as of 00:03, 9 February 2016
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k77 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 16:39, 10 September 2015

2015-09-10T16:39:50Z

←Older revision		Revision as of 16:39, 10 September 2015
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	<StructureSection load='1k77' size='340' side='right' caption='[[1k77]], [[Resolution\|resolution]] 1.63Å' scene=''>		<StructureSection load='1k77' size='340' side='right' caption='[[1k77]], [[Resolution\|resolution]] 1.63Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1k77]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia~~ coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1K77 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1k77]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1K77 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1k77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k77 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1k77 RCSB], [http://www.ebi.ac.uk/pdbsum/1k77 PDBsum], [http://www.topsan.org/Proteins/MCSG/1k77 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1k77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k77 OCA], [http://pdbe.org/1k77 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1k77 RCSB], [http://www.ebi.ac.uk/pdbsum/1k77 PDBsum], [http://www.topsan.org/Proteins/MCSG/1k77 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 21:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia~~ coli]]	+	[[Category: Bacillus coli migula 1895]]
	[[Category: Arrowsmith, C H]]		[[Category: Arrowsmith, C H]]
	[[Category: Beasley, S]]		[[Category: Beasley, S]]

OCA at 03:04, 25 December 2014

2014-12-25T03:04:42Z

←Older revision		Revision as of 03:04, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1k77]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1K77 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1k77]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1K77 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1k77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k77 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1k77 RCSB], [http://www.ebi.ac.uk/pdbsum/1k77 PDBsum], [http://www.topsan.org/Proteins/MCSG/1k77 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1k77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k77 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1k77 RCSB], [http://www.ebi.ac.uk/pdbsum/1k77 PDBsum], [http://www.topsan.org/Proteins/MCSG/1k77 TOPSAN]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/YGBM_ECOLI YGBM_ECOLI]] Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Arrowsmith, C H.]]	+	[[Category: Arrowsmith, C H]]
-	[[Category: Beasley, S.]]	+	[[Category: Beasley, S]]
-	[[Category: Edwards, A M.]]	+	[[Category: Edwards, A M]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: Kim, Y.]]	+	[[Category: Kim, Y]]
-	[[Category: Laskowski, R.]]	+	[[Category: Laskowski, R]]
-	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Savchenko, A.]]	+	[[Category: Savchenko, A]]
-	[[Category: Skarina, T.]]	+	[[Category: Skarina, T]]
	[[Category: Hypothetical protein]]		[[Category: Hypothetical protein]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
-	[[Category: ~~Midwest center for structural genomic]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
-	~~[[Category: Psi]]~~	+
-	~~[[Category: Structural genomic~~]]	+
	[[Category: Tim barrel]]		[[Category: Tim barrel]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 08:57, 28 September 2014

2014-09-28T08:57:14Z

←Older revision		Revision as of 08:57, 28 September 2014
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-	~~[[Image:1k77.png\|left\|200px]]~~	+	==Crystal Structure of EC1530, a Putative Oxygenase from Escherichia coli==
-		+	<StructureSection load='1k77' size='340' side='right' caption='[[1k77]], [[Resolution\|resolution]] 1.63Å' scene=''>
-	~~{{STRUCTURE_1k77\| PDB=1k77 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1k77]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1K77 FirstGlance]. <br>
-	===Crystal Structure of EC1530, a Putative Oxygenase from Escherichia coli===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1k77 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k77 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1k77 RCSB], [http://www.ebi.ac.uk/pdbsum/1k77 PDBsum], [http://www.topsan.org/Proteins/MCSG/1k77 TOPSAN]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[1k77]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA].	+	== Evolutionary Conservation ==
-		+	[[Image:Consurf_key_small.gif\|200px\|right]]
-	==~~Reference~~==	+	Check<jmol>
-	<~~ref group~~="~~xtra~~">~~PMID~~:~~012112708~~</~~ref~~><~~references group~~="~~xtra~~"/>	+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k7/1k77_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Arrowsmith, C H.]]		[[Category: Arrowsmith, C H.]]

OCA: Protected "1k77" [edit=sysop:move=sysop]

2012-12-05T20:18:32Z

Protected "1k77" [edit=sysop:move=sysop]

←Older revision

Revision as of 20:18, 5 December 2012

OCA at 20:18, 5 December 2012

2012-12-05T20:18:30Z

←Older revision		Revision as of 20:18, 5 December 2012
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-	{{Seed}}
	[[Image:1k77.png\|left\|200px]]		[[Image:1k77.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1k77", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1k77\| PDB=1k77 \| SCENE= }}		{{STRUCTURE_1k77\| PDB=1k77 \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~1K77~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA].	+	[[1k77]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K77 OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~12112708~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:012112708</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Arrowsmith, C H.]]		[[Category: Arrowsmith, C H.]]
Line 36:		Line 29:
	[[Category: Tim barrel]]		[[Category: Tim barrel]]
	[[Category: Unknown function]]		[[Category: Unknown function]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 29 15:51:02 2009''