1ogp - Revision history

OCA at 12:39, 13 December 2023

2023-12-13T12:39:53Z

←Older revision		Revision as of 12:39, 13 December 2023
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	<StructureSection load='1ogp' size='340' side='right'caption='[[1ogp]], [[Resolution\|resolution]] 2.60Å' scene=''>		<StructureSection load='1ogp' size='340' side='right'caption='[[1ogp]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Arath Arath~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OGP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OGP FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.6Å</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Sulfite_oxidase Sulfite oxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.3.1 1.8.3.1] </span></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [https://pdbe.org/1ogp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [https://www.ebi.ac.uk/pdbsum/1ogp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ogp ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [https://pdbe.org/1ogp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [https://www.ebi.ac.uk/pdbsum/1ogp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ogp ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/SUOX_ARATH SUOX_ARATH]] Probably involved in sulfite oxidative detoxification.	+	[https://www.uniprot.org/uniprot/SUOX_ARATH SUOX_ARATH] Probably involved in sulfite oxidative detoxification.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 36:		Line 36:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Arath~~]]	+	[[Category: Arabidopsis thaliana]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Sulfite oxidase]]~~	+	[[Category: Fischer K]]
-	[[Category: Fischer, K]]	+	[[Category: Kisker C]]
-	[[Category: Kisker, C]]	+	[[Category: Mendel RR]]
-	[[Category: Mendel~~, R R~~]]	+	[[Category: Schrader N]]
-	[[Category: Schrader, N]]	+	[[Category: Schwarz G]]
-	[[Category: Schwarz, G]]	+	[[Category: Theis K]]
-	[[Category: Theis, K]]	+
-	~~[[Category: Intramolecular electron transfer]]~~	+
-	~~[[Category: Molybdenum cofactor]]~~	+
-	~~[[Category: Molybdopterin]]~~	+
-	~~[[Category: Oxidoreducta]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Peroxisome]]~~	+
-	~~[[Category: Plant sulfite oxidase~~]]	+

OCA at 07:12, 25 August 2021

2021-08-25T07:12:59Z

←Older revision		Revision as of 07:12, 25 August 2021
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	<StructureSection load='1ogp' size='340' side='right'caption='[[1ogp]], [[Resolution\|resolution]] 2.60Å' scene=''>		<StructureSection load='1ogp' size='340' side='right'caption='[[1ogp]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1OGP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OGP FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Sulfite_oxidase Sulfite oxidase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.3.1 1.8.3.1] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Sulfite_oxidase Sulfite oxidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.3.1 1.8.3.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [~~http~~://pdbe.org/1ogp PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1ogp PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1ogp ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [https://pdbe.org/1ogp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [https://www.ebi.ac.uk/pdbsum/1ogp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ogp ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/SUOX_ARATH SUOX_ARATH]] Probably involved in sulfite oxidative detoxification.	+	[[https://www.uniprot.org/uniprot/SUOX_ARATH SUOX_ARATH]] Probably involved in sulfite oxidative detoxification.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 18:30, 20 November 2019

2019-11-20T18:30:44Z

←Older revision		Revision as of 18:30, 20 November 2019
Line 1:		Line 1:

	==The crystal structure of plant sulfite oxidase provides insight into sulfite oxidation in plants and animals==		==The crystal structure of plant sulfite oxidase provides insight into sulfite oxidation in plants and animals==
-	<StructureSection load='1ogp' size='340' side='right' caption='[[1ogp]], [[Resolution\|resolution]] 2.60Å' scene=''>	+	<StructureSection load='1ogp' size='340' side='right'caption='[[1ogp]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OGP FirstGlance]. <br>		<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OGP FirstGlance]. <br>
Line 29:		Line 29:
	</div>		</div>
	<div class="pdbe-citations 1ogp" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1ogp" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Sulfite Oxidase\|Sulfite Oxidase]]
	== References ==		== References ==
	<references/>		<references/>
Line 34:		Line 37:
	</StructureSection>		</StructureSection>
	[[Category: Arath]]		[[Category: Arath]]
		+	[[Category: Large Structures]]
	[[Category: Sulfite oxidase]]		[[Category: Sulfite oxidase]]
	[[Category: Fischer, K]]		[[Category: Fischer, K]]

OCA at 07:17, 7 February 2018

2018-02-07T07:17:55Z

←Older revision		Revision as of 07:17, 7 February 2018
Line 1:		Line 1:
-	==~~THE CRYSTAL STRUCTURE OF PLANT SULFITE OXIDASE PROVIDES INSIGHT INTO SULFITE OXIDATION IN PLANTS AND ANIMALS~~==	+
		+	==The crystal structure of plant sulfite oxidase provides insight into sulfite oxidation in plants and animals==
	<StructureSection load='1ogp' size='340' side='right' caption='[[1ogp]], [[Resolution\|resolution]] 2.60Å' scene=''>		<StructureSection load='1ogp' size='340' side='right' caption='[[1ogp]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Sulfite_oxidase Sulfite oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.3.1 1.8.3.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Sulfite_oxidase Sulfite oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.3.1 1.8.3.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [http://pdbe.org/1ogp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [http://www.ebi.ac.uk/pdbsum/1ogp PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [http://pdbe.org/1ogp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [http://www.ebi.ac.uk/pdbsum/1ogp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ogp ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/og/1ogp_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/og/1ogp_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 28:		Line 29:
	</div>		</div>
	<div class="pdbe-citations 1ogp" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 1ogp" style="background-color:#fffaf0;"></div>
-
-	==See Also==
-	*[[Sulfite Oxidase\|Sulfite Oxidase]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 04:49, 10 February 2016

2016-02-10T04:49:59Z

←Older revision		Revision as of 04:49, 10 February 2016
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ogp ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 05:32, 11 September 2015

2015-09-11T05:32:41Z

←Older revision		Revision as of 05:32, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1ogp' size='340' side='right' caption='[[1ogp]], [[Resolution\|resolution]] 2.60Å' scene=''>		<StructureSection load='1ogp' size='340' side='right' caption='[[1ogp]], [[Resolution\|resolution]] 2.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Arabidopsis_thaliana Arabidopsis thaliana~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OGP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OGP FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Sulfite_oxidase Sulfite oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.3.1 1.8.3.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Sulfite_oxidase Sulfite oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.3.1 1.8.3.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [http://www.ebi.ac.uk/pdbsum/1ogp PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [http://pdbe.org/1ogp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [http://www.ebi.ac.uk/pdbsum/1ogp PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 27:		Line 27:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1ogp" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 34:		Line 35:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Arabidopsis thaliana~~]]	+	[[Category: Arath]]
	[[Category: Sulfite oxidase]]		[[Category: Sulfite oxidase]]
	[[Category: Fischer, K]]		[[Category: Fischer, K]]

OCA at 11:53, 25 December 2014

2014-12-25T11:53:57Z

←Older revision		Revision as of 11:53, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OGP FirstGlance]. <br>		<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OGP FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Sulfite_oxidase Sulfite oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.3.1 1.8.3.1] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Sulfite_oxidase Sulfite oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.3.1 1.8.3.1] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [http://www.ebi.ac.uk/pdbsum/1ogp PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [http://www.ebi.ac.uk/pdbsum/1ogp PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/SUOX_ARATH SUOX_ARATH]] Probably involved in sulfite oxidative detoxification.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 34:		Line 36:
	[[Category: Arabidopsis thaliana]]		[[Category: Arabidopsis thaliana]]
	[[Category: Sulfite oxidase]]		[[Category: Sulfite oxidase]]
-	[[Category: Fischer, K.]]	+	[[Category: Fischer, K]]
-	[[Category: Kisker, C.]]	+	[[Category: Kisker, C]]
-	[[Category: Mendel, R R.]]	+	[[Category: Mendel, R R]]
-	[[Category: Schrader, N.]]	+	[[Category: Schrader, N]]
-	[[Category: Schwarz, G.]]	+	[[Category: Schwarz, G]]
-	[[Category: Theis, K.]]	+	[[Category: Theis, K]]
	[[Category: Intramolecular electron transfer]]		[[Category: Intramolecular electron transfer]]
	[[Category: Molybdenum cofactor]]		[[Category: Molybdenum cofactor]]

OCA at 14:37, 29 September 2014

2014-09-29T14:37:00Z

←Older revision		Revision as of 14:37, 29 September 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_1ogp\| PDB=1ogp \| SCENE= }}~~	+	==THE CRYSTAL STRUCTURE OF PLANT SULFITE OXIDASE PROVIDES INSIGHT INTO SULFITE OXIDATION IN PLANTS AND ANIMALS==
-	===THE CRYSTAL STRUCTURE OF PLANT SULFITE OXIDASE PROVIDES INSIGHT INTO SULFITE OXIDATION IN PLANTS AND ANIMALS===	+	<StructureSection load='1ogp' size='340' side='right' caption='[[1ogp]], [[Resolution\|resolution]] 2.60Å' scene=''>
-	~~{{ABSTRACT_PUBMED_14527393}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1ogp]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OGP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OGP FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MTQ:(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)'>MTQ</scene><br>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Sulfite_oxidase Sulfite oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.3.1 1.8.3.1] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ogp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ogp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ogp RCSB], [http://www.ebi.ac.uk/pdbsum/1ogp PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/og/1ogp_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The molybdenum cofactor (Moco) containing sulfite oxidase (SO) from Arabidopsis thaliana has recently been identified and biochemically characterized. The enzyme is found in peroxisomes and believed to detoxify excess sulfite that is produced during sulfur assimilation, or due to air pollution. Plant SO (PSO) is homodimeric and homologous to animal SO, but contains only a single Moco domain without an additional redox center. Here, we present the first crystal structure of a plant Moco enzyme, the apo-state of Arabidopsis SO at 2.6 A resolution. The overall fold and coordination of the Moco are similar to chicken SO (CSO). Comparisons of conserved surface residues and the charge distribution in PSO and CSO reveal major differences near the entrance to both active sites reflecting different electron acceptors. Arg374 has been identified as an important substrate binding residue due to its conformational change when compared to the sulfate bound structure of CSO.

-	~~==About this Structure==~~	+	The crystal structure of plant sulfite oxidase provides insights into sulfite oxidation in plants and animals.,Schrader N, Fischer K, Theis K, Mendel RR, Schwarz G, Kisker C Structure. 2003 Oct;11(10):1251-63. PMID:14527393<ref>PMID:14527393</ref>
-	~~[[1ogp]] is a 6 chain~~ structure ~~with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]~~. ~~Full crystallographic information is available from [http~~://~~oca~~.~~weizmann~~.ac.il/~~oca-bin/ocashort?id=1OGP OCA].~~	+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>

	==See Also==		==See Also==
	*[[Sulfite Oxidase\|Sulfite Oxidase]]		*[[Sulfite Oxidase\|Sulfite Oxidase]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:014527393<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Arabidopsis thaliana]]		[[Category: Arabidopsis thaliana]]
	[[Category: Sulfite oxidase]]		[[Category: Sulfite oxidase]]

OCA at 09:55, 11 March 2013

2013-03-11T09:55:14Z

←Older revision		Revision as of 09:55, 11 March 2013
Line 1:		Line 1:
-	[[Image:1ogp.png\|left\|200px]]
-
	{{STRUCTURE_1ogp\| PDB=1ogp \| SCENE= }}		{{STRUCTURE_1ogp\| PDB=1ogp \| SCENE= }}
-
	===THE CRYSTAL STRUCTURE OF PLANT SULFITE OXIDASE PROVIDES INSIGHT INTO SULFITE OXIDATION IN PLANTS AND ANIMALS===		===THE CRYSTAL STRUCTURE OF PLANT SULFITE OXIDASE PROVIDES INSIGHT INTO SULFITE OXIDATION IN PLANTS AND ANIMALS===
-
	{{ABSTRACT_PUBMED_14527393}}		{{ABSTRACT_PUBMED_14527393}}

OCA: Protected "1ogp" [edit=sysop:move=sysop]

2012-12-12T22:18:18Z

Protected "1ogp" [edit=sysop:move=sysop]

←Older revision

Revision as of 22:18, 12 December 2012