1op1 - Revision history

OCA at 05:49, 17 April 2024

2024-04-17T05:49:25Z

←Older revision		Revision as of 05:49, 17 April 2024
Line 1:		Line 1:

	==Solution NMR structure of domain 1 of receptor associated protein==		==Solution NMR structure of domain 1 of receptor associated protein==
-	<StructureSection load='1op1' size='340' side='right'caption='[[1op1~~]], [[NMR_Ensembles_of_Models \| 1 NMR models~~]]' scene=''>	+	<StructureSection load='1op1' size='340' side='right'caption='[[1op1]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Human Human~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>LRPAP1 OR A2MRAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~9606 HUMAN])~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [~~http~~://pdbe.org/1op1 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1op1 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1op1 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [https://pdbe.org/1op1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [https://www.ebi.ac.uk/pdbsum/1op1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1op1 ProSAT]</span></td></tr>
	</table>		</table>
	== Disease ==		== Disease ==
-	[~~[http~~://www.uniprot.org/uniprot/AMRP_HUMAN AMRP_HUMAN]] Note=In complex with the alpha-2-MR or gp330, it may have some role in the pathogenesis of membrane glomerular nephritis.	+	[https://www.uniprot.org/uniprot/AMRP_HUMAN AMRP_HUMAN] Note=In complex with the alpha-2-MR or gp330, it may have some role in the pathogenesis of membrane glomerular nephritis.
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/AMRP_HUMAN AMRP_HUMAN]] Interacts with LRP1/alpha-2-macroglobulin receptor and glycoprotein 330.	+	[https://www.uniprot.org/uniprot/AMRP_HUMAN AMRP_HUMAN] Interacts with LRP1/alpha-2-macroglobulin receptor and glycoprotein 330.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1op1 ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1op1 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	The 39 kDa receptor associated protein (RAP) is a modular protein consisting of multiple domains. There has been no x-ray crystal structure of RAP available and the full-length protein does not behave well in a NMR tube. To elucidate the 3D structure of the RAP, we undertook structure determination of individual domains of the RAP. As the first step, here we report the nearly complete assignments of the (1)H, (13)C and (15)N chemical shift signals of domain 1 of the RAP.
-
-	1H, 13C and 15N resonance assignments of domain 1 of receptor associated protein.,Wu Y, Migliorini M, Yu P, Strickland DK, Wang YX J Biomol NMR. 2003 Jun;26(2):187-8. PMID:12766414<ref>PMID:12766414</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 1op1" style="background-color:#fffaf0;"></div>
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Human~~]]	+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Migliorini, M]]	+	[[Category: Migliorini M]]
-	[[Category: Strickland~~, D K~~]]	+	[[Category: Strickland DK]]
-	[[Category: Wang, Y X]]	+	[[Category: Wang Y-X]]
-	[[Category: Wu, Y]]	+	[[Category: Wu Y]]
-	[[Category: Yu, P]]	+	[[Category: Yu P]]
-	~~[[Category: Helical bundle]]~~	+
-	~~[[Category: Receptor associated protein~~]]	+

OCA at 07:12, 9 December 2020

2020-12-09T07:12:54Z

←Older revision		Revision as of 07:12, 9 December 2020
Line 1:		Line 1:

	==Solution NMR structure of domain 1 of receptor associated protein==		==Solution NMR structure of domain 1 of receptor associated protein==
-	<StructureSection load='1op1' size='340' side='right' caption='[[1op1]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>	+	<StructureSection load='1op1' size='340' side='right'caption='[[1op1]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LRPAP1 OR A2MRAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LRPAP1 OR A2MRAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [http://pdbe.org/1op1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [http://www.ebi.ac.uk/pdbsum/1op1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1op1 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [http://pdbe.org/1op1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [http://www.ebi.ac.uk/pdbsum/1op1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1op1 ProSAT]</span></td></tr>
	</table>		</table>
	== Disease ==		== Disease ==
Line 35:		Line 35:
	</StructureSection>		</StructureSection>
	[[Category: Human]]		[[Category: Human]]
		+	[[Category: Large Structures]]
	[[Category: Migliorini, M]]		[[Category: Migliorini, M]]
	[[Category: Strickland, D K]]		[[Category: Strickland, D K]]

OCA at 07:51, 12 December 2018

2018-12-12T07:51:22Z

←Older revision		Revision as of 07:51, 12 December 2018
Line 3:		Line 3:
	<StructureSection load='1op1' size='340' side='right' caption='[[1op1]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>		<StructureSection load='1op1' size='340' side='right' caption='[[1op1]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [http://pdbe.org/1op1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [http://www.ebi.ac.uk/pdbsum/1op1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1op1 ProSAT]</span></td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LRPAP1 OR A2MRAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [http://pdbe.org/1op1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [http://www.ebi.ac.uk/pdbsum/1op1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1op1 ProSAT]</span></td></tr>
	</table>		</table>
	== Disease ==		== Disease ==
Line 14:		Line 15:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/op/1op1_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/op/1op1_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 33:		Line 34:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Human]]
	[[Category: Migliorini, M]]		[[Category: Migliorini, M]]
	[[Category: Strickland, D K]]		[[Category: Strickland, D K]]

OCA at 07:10, 9 March 2017

2017-03-09T07:10:27Z

←Older revision		Revision as of 07:10, 9 March 2017
Line 1:		Line 1:
		+
	==Solution NMR structure of domain 1 of receptor associated protein==		==Solution NMR structure of domain 1 of receptor associated protein==
	<StructureSection load='1op1' size='340' side='right' caption='[[1op1]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>		<StructureSection load='1op1' size='340' side='right' caption='[[1op1]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure ~~with sequence from [http://en.wikipedia.org/wiki/Human Human]~~. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LRPAP1 OR A2MRAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [http://pdbe.org/1op1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [http://www.ebi.ac.uk/pdbsum/1op1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1op1 ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [http://pdbe.org/1op1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [http://www.ebi.ac.uk/pdbsum/1op1 PDBsum]</span></td></tr>	+
	</table>		</table>
	== Disease ==		== Disease ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Human]]
	[[Category: Migliorini, M]]		[[Category: Migliorini, M]]
	[[Category: Strickland, D K]]		[[Category: Strickland, D K]]
-	[[Category: Wang, Y-X]]	+	[[Category: Wang, Y X]]
	[[Category: Wu, Y]]		[[Category: Wu, Y]]
	[[Category: Yu, P]]		[[Category: Yu, P]]
	[[Category: Helical bundle]]		[[Category: Helical bundle]]
	[[Category: Receptor associated protein]]		[[Category: Receptor associated protein]]

OCA at 23:17, 8 February 2016

2016-02-08T23:17:15Z

←Older revision		Revision as of 23:17, 8 February 2016
Line 18:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1op1 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 16:18, 10 September 2015

2015-09-10T16:18:21Z

←Older revision		Revision as of 16:18, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='1op1' size='340' side='right' caption='[[1op1]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>		<StructureSection load='1op1' size='340' side='right' caption='[[1op1]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Homo_sapiens Homo sapiens~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LRPAP1 OR A2MRAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 ~~Homo sapiens~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LRPAP1 OR A2MRAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [http://www.ebi.ac.uk/pdbsum/1op1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [http://pdbe.org/1op1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [http://www.ebi.ac.uk/pdbsum/1op1 PDBsum]</span></td></tr>
	</table>		</table>
	== Disease ==		== Disease ==
Line 28:		Line 28:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1op1" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Homo sapiens~~]]	+	[[Category: Human]]
	[[Category: Migliorini, M]]		[[Category: Migliorini, M]]
	[[Category: Strickland, D K]]		[[Category: Strickland, D K]]

OCA at 06:56, 6 January 2015

2015-01-06T06:56:29Z

←Older revision		Revision as of 06:56, 6 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LRPAP1 OR A2MRAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LRPAP1 OR A2MRAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [http://www.ebi.ac.uk/pdbsum/1op1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [http://www.ebi.ac.uk/pdbsum/1op1 PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Disease ==		== Disease ==
	[[http://www.uniprot.org/uniprot/AMRP_HUMAN AMRP_HUMAN]] Note=In complex with the alpha-2-MR or gp330, it may have some role in the pathogenesis of membrane glomerular nephritis.		[[http://www.uniprot.org/uniprot/AMRP_HUMAN AMRP_HUMAN]] Note=In complex with the alpha-2-MR or gp330, it may have some role in the pathogenesis of membrane glomerular nephritis.
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
-	[[Category: Migliorini, M.]]	+	[[Category: Migliorini, M]]
-	[[Category: Strickland, D K.]]	+	[[Category: Strickland, D K]]
-	[[Category: Wang, Y-X.]]	+	[[Category: Wang, Y-X]]
-	[[Category: Wu, Y.]]	+	[[Category: Wu, Y]]
-	[[Category: Yu, P.]]	+	[[Category: Yu, P]]
	[[Category: Helical bundle]]		[[Category: Helical bundle]]
	[[Category: Receptor associated protein]]		[[Category: Receptor associated protein]]

OCA at 14:00, 29 September 2014

2014-09-29T14:00:37Z

←Older revision		Revision as of 14:00, 29 September 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_1op1\| PDB=1op1 \| SCENE= }}~~	+	==Solution NMR structure of domain 1 of receptor associated protein==
-	===Solution NMR structure of domain 1 of receptor associated protein===	+	<StructureSection load='1op1' size='340' side='right' caption='[[1op1]], [[NMR_Ensembles_of_Models \| 1 NMR models]]' scene=''>
-	~~{{ABSTRACT_PUBMED_12766414}}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[1op1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1OP1 FirstGlance]. <br>
-	==Disease==	+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LRPAP1 OR A2MRAP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1op1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1op1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1op1 RCSB], [http://www.ebi.ac.uk/pdbsum/1op1 PDBsum]</span></td></tr>
		+	<table>
		+	== Disease ==
	[[http://www.uniprot.org/uniprot/AMRP_HUMAN AMRP_HUMAN]] Note=In complex with the alpha-2-MR or gp330, it may have some role in the pathogenesis of membrane glomerular nephritis.		[[http://www.uniprot.org/uniprot/AMRP_HUMAN AMRP_HUMAN]] Note=In complex with the alpha-2-MR or gp330, it may have some role in the pathogenesis of membrane glomerular nephritis.
-		+	== Function ==
-	==Function==	+
	[[http://www.uniprot.org/uniprot/AMRP_HUMAN AMRP_HUMAN]] Interacts with LRP1/alpha-2-macroglobulin receptor and glycoprotein 330.		[[http://www.uniprot.org/uniprot/AMRP_HUMAN AMRP_HUMAN]] Interacts with LRP1/alpha-2-macroglobulin receptor and glycoprotein 330.
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/op/1op1_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The 39 kDa receptor associated protein (RAP) is a modular protein consisting of multiple domains. There has been no x-ray crystal structure of RAP available and the full-length protein does not behave well in a NMR tube. To elucidate the 3D structure of the RAP, we undertook structure determination of individual domains of the RAP. As the first step, here we report the nearly complete assignments of the (1)H, (13)C and (15)N chemical shift signals of domain 1 of the RAP.

-	~~==About this Structure==~~	+	1H, 13C and 15N resonance assignments of domain 1 of receptor associated protein.,Wu Y, Migliorini M, Yu P, Strickland DK, Wang YX J Biomol NMR. 2003 Jun;26(2):187-8. PMID:12766414<ref>PMID:12766414</ref>
-	~~[[1op1]] is a~~ 1 ~~chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Homo_sapiens Homo sapiens]~~. ~~Full experimental information is available from [http~~:/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1OP1 OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:012766414</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Migliorini, M.]]		[[Category: Migliorini, M.]]

OCA at 23:02, 24 March 2013

2013-03-24T23:02:44Z

←Older revision		Revision as of 23:02, 24 March 2013
Line 1:		Line 1:
-	[[Image:1op1.png\|left\|200px]]
-
	{{STRUCTURE_1op1\| PDB=1op1 \| SCENE= }}		{{STRUCTURE_1op1\| PDB=1op1 \| SCENE= }}
-
	===Solution NMR structure of domain 1 of receptor associated protein===		===Solution NMR structure of domain 1 of receptor associated protein===
		+	{{ABSTRACT_PUBMED_12766414}}

-	~~{{ABSTRACT_PUBMED_12766414}}~~	+	==Disease==
		+	[[http://www.uniprot.org/uniprot/AMRP_HUMAN AMRP_HUMAN]] Note=In complex with the alpha-2-MR or gp330, it may have some role in the pathogenesis of membrane glomerular nephritis.
		+
		+	==Function==
		+	[[http://www.uniprot.org/uniprot/AMRP_HUMAN AMRP_HUMAN]] Interacts with LRP1/alpha-2-macroglobulin receptor and glycoprotein 330.

	==About this Structure==		==About this Structure==
Line 11:		Line 13:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:012766414</ref><references group="xtra"/>	+	<ref group="xtra">PMID:012766414</ref><references group="xtra"/><references/>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: Migliorini, M.]]		[[Category: Migliorini, M.]]

OCA: Protected "1op1" [edit=sysop:move=sysop]

2012-12-12T21:59:15Z

Protected "1op1" [edit=sysop:move=sysop]

←Older revision

Revision as of 21:59, 12 December 2012