1qva - Revision history

OCA at 08:18, 14 February 2024

2024-02-14T08:18:13Z

←Older revision		Revision as of 08:18, 14 February 2024
Line 3:		Line 3:
	<StructureSection load='1qva' size='340' side='right'caption='[[1qva]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='1qva' size='340' side='right'caption='[[1qva]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Atcc_18824 Atcc 18824~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QVA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QVA FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qva OCA], [https://pdbe.org/1qva PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qva RCSB], [https://www.ebi.ac.uk/pdbsum/1qva PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qva ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.5Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qva OCA], [https://pdbe.org/1qva PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qva RCSB], [https://www.ebi.ac.uk/pdbsum/1qva PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qva ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/IF4A_YEAST IF4A_YEAST]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qva ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qva ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
-	<div style="background-color:#fffaf0;">
-	== Publication Abstract from PubMed ==
-	The eukaryotic translation initiation factor 4A (elF4A) is a representative of the DEAD-box RNA helicase protein family. We have solved the crystallographic structure of the amino-terminal domain (residues 1-223) of yeast elF4A. The domain is built around a core scaffold, a parallel alpha-beta motif with five beta strands, that is found in other RNA and DNA helicases, as well as in the RecA protein. The amino acid sequence motifs that are conserved within the helicase family are localized to the beta strand-->alpha helix junctions within the core. The core of the amino terminal domain of elF4A is amplified with additional structural elements that differ from those of other helicases. The phosphate binding loop (the Walker A motif) is in an unusual closed conformation. The crystallographic structure reveals specific interactions between amino acid residues of the phosphate binding loop, the DEAD motif, and the SAT motif, whose alteration is known to impair coupling between the ATPase cycle and the RNA unwinding activity of elF4A.
-
-	Crystallographic structure of the amino terminal domain of yeast initiation factor 4A, a representative DEAD-box RNA helicase.,Johnson ER, McKay DB RNA. 1999 Dec;5(12):1526-34. PMID:10606264<ref>PMID:10606264</ref>
-
-	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	</div>
-	<div class="pdbe-citations 1qva" style="background-color:#fffaf0;"></div>
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 18824]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Johnson, E R~~]]	+	[[Category: Saccharomyces cerevisiae]]
-	[[Category: ~~McKay, D B~~]]	+	[[Category: Johnson ER]]
-	[[Category: ~~Dead box]]~~	+	[[Category: McKay DB]]
-	~~[[Category: Eif4a]]~~	+
-	~~[[Category: Gene regulation]]~~	+
-	~~[[Category: Rna helicase~~]]	+

OCA at 10:05, 15 September 2021

2021-09-15T10:05:11Z

←Older revision		Revision as of 10:05, 15 September 2021
Line 3:		Line 3:
	<StructureSection load='1qva' size='340' side='right'caption='[[1qva]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='1qva' size='340' side='right'caption='[[1qva]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1QVA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QVA FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1qva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qva OCA], [~~http~~://pdbe.org/1qva PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1qva RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1qva PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1qva ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qva OCA], [https://pdbe.org/1qva PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qva RCSB], [https://www.ebi.ac.uk/pdbsum/1qva PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qva ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 11:39, 4 December 2019

2019-12-04T11:39:58Z

←Older revision		Revision as of 11:39, 4 December 2019
Line 1:		Line 1:

	==YEAST INITIATION FACTOR 4A N-TERMINAL DOMAIN==		==YEAST INITIATION FACTOR 4A N-TERMINAL DOMAIN==
-	<StructureSection load='1qva' size='340' side='right' caption='[[1qva]], [[Resolution\|resolution]] 2.50Å' scene=''>	+	<StructureSection load='1qva' size='340' side='right'caption='[[1qva]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1QVA FirstGlance]. <br>		<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1QVA FirstGlance]. <br>
Line 30:		Line 30:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 18824]]		[[Category: Atcc 18824]]
		+	[[Category: Large Structures]]
	[[Category: Johnson, E R]]		[[Category: Johnson, E R]]
	[[Category: McKay, D B]]		[[Category: McKay, D B]]

OCA at 08:04, 28 February 2018

2018-02-28T08:04:23Z

←Older revision		Revision as of 08:04, 28 February 2018
Line 1:		Line 1:
		+
	==YEAST INITIATION FACTOR 4A N-TERMINAL DOMAIN==		==YEAST INITIATION FACTOR 4A N-TERMINAL DOMAIN==
	<StructureSection load='1qva' size='340' side='right' caption='[[1qva]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='1qva' size='340' side='right' caption='[[1qva]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1QVA FirstGlance]. <br>		<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1QVA FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qva OCA], [http://pdbe.org/1qva PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1qva RCSB], [http://www.ebi.ac.uk/pdbsum/1qva PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qva OCA], [http://pdbe.org/1qva PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1qva RCSB], [http://www.ebi.ac.uk/pdbsum/1qva PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1qva ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 9:		Line 10:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qv/1qva_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qv/1qva_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qva ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 22:29, 11 September 2015

2015-09-11T22:29:00Z

←Older revision		Revision as of 22:29, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1qva' size='340' side='right' caption='[[1qva]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='1qva' size='340' side='right' caption='[[1qva]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Saccharomyces_cerevisiae Saccharomyces cerevisiae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1QVA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1QVA FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qva OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1qva RCSB], [http://www.ebi.ac.uk/pdbsum/1qva PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qva OCA], [http://pdbe.org/1qva PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1qva RCSB], [http://www.ebi.ac.uk/pdbsum/1qva PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 23:		Line 23:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1qva" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Saccharomyces cerevisiae~~]]	+	[[Category: Atcc 18824]]
	[[Category: Johnson, E R]]		[[Category: Johnson, E R]]
	[[Category: McKay, D B]]		[[Category: McKay, D B]]

OCA at 20:17, 25 December 2014

2014-12-25T20:17:55Z

←Older revision		Revision as of 20:17, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1QVA FirstGlance]. <br>		<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1QVA FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qva OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1qva RCSB], [http://www.ebi.ac.uk/pdbsum/1qva PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qva OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1qva RCSB], [http://www.ebi.ac.uk/pdbsum/1qva PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 28:		Line 28:
	</StructureSection>		</StructureSection>
	[[Category: Saccharomyces cerevisiae]]		[[Category: Saccharomyces cerevisiae]]
-	[[Category: Johnson, E R.]]	+	[[Category: Johnson, E R]]
-	[[Category: McKay, D B.]]	+	[[Category: McKay, D B]]
	[[Category: Dead box]]		[[Category: Dead box]]
	[[Category: Eif4a]]		[[Category: Eif4a]]
	[[Category: Gene regulation]]		[[Category: Gene regulation]]
	[[Category: Rna helicase]]		[[Category: Rna helicase]]

OCA at 15:12, 29 September 2014

2014-09-29T15:12:52Z

←Older revision		Revision as of 15:12, 29 September 2014
Line 1:		Line 1:
-	[[~~Image~~:1qva.~~png\|left~~\|200px]]	+	==YEAST INITIATION FACTOR 4A N-TERMINAL DOMAIN==
		+	<StructureSection load='1qva' size='340' side='right' caption='[[1qva]], [[Resolution\|resolution]] 2.50Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1qva]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1QVA FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qva FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qva OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1qva RCSB], [http://www.ebi.ac.uk/pdbsum/1qva PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qv/1qva_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The eukaryotic translation initiation factor 4A (elF4A) is a representative of the DEAD-box RNA helicase protein family. We have solved the crystallographic structure of the amino-terminal domain (residues 1-223) of yeast elF4A. The domain is built around a core scaffold, a parallel alpha-beta motif with five beta strands, that is found in other RNA and DNA helicases, as well as in the RecA protein. The amino acid sequence motifs that are conserved within the helicase family are localized to the beta strand-->alpha helix junctions within the core. The core of the amino terminal domain of elF4A is amplified with additional structural elements that differ from those of other helicases. The phosphate binding loop (the Walker A motif) is in an unusual closed conformation. The crystallographic structure reveals specific interactions between amino acid residues of the phosphate binding loop, the DEAD motif, and the SAT motif, whose alteration is known to impair coupling between the ATPase cycle and the RNA unwinding activity of elF4A.

-	~~{{STRUCTURE_1qva\| PDB=1qva \| SCENE= }}~~	+	Crystallographic structure of the amino terminal domain of yeast initiation factor 4A, a representative DEAD-box RNA helicase.,Johnson ER, McKay DB RNA. 1999 Dec;5(12):1526-34. PMID:10606264<ref>PMID:10606264</ref>

-	~~===YEAST INITIATION FACTOR 4A N-TERMINAL DOMAIN===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_10606264}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1qva]] is~~ a ~~1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:010606264<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Saccharomyces cerevisiae]]		[[Category: Saccharomyces cerevisiae]]
	[[Category: Johnson, E R.]]		[[Category: Johnson, E R.]]

OCA: Protected "1qva" [edit=sysop:move=sysop]

2013-01-02T09:55:28Z

Protected "1qva" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:55, 2 January 2013

OCA at 09:55, 2 January 2013

2013-01-02T09:55:26Z

←Older revision		Revision as of 09:55, 2 January 2013
Line 1:		Line 1:
-	{{Seed}}
	[[Image:1qva.png\|left\|200px]]		[[Image:1qva.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1qva", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_1qva\| PDB=1qva \| SCENE= }}		{{STRUCTURE_1qva\| PDB=1qva \| SCENE= }}

	===YEAST INITIATION FACTOR 4A N-TERMINAL DOMAIN===		===YEAST INITIATION FACTOR 4A N-TERMINAL DOMAIN===

-
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	{{ABSTRACT_PUBMED_10606264}}		{{ABSTRACT_PUBMED_10606264}}

	==About this Structure==		==About this Structure==
-	~~1QVA~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA].	+	[[1qva]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~10606264~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:010606264</ref><references group="xtra"/>
	[[Category: Saccharomyces cerevisiae]]		[[Category: Saccharomyces cerevisiae]]
	[[Category: Johnson, E R.]]		[[Category: Johnson, E R.]]
Line 29:		Line 17:
	[[Category: Dead box]]		[[Category: Dead box]]
	[[Category: Eif4a]]		[[Category: Eif4a]]
		+	[[Category: Gene regulation]]
	[[Category: Rna helicase]]		[[Category: Rna helicase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:56:31 2009''

OCA at 03:56, 18 February 2009

2009-02-18T03:56:34Z

←Older revision		Revision as of 03:56, 18 February 2009
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	==About this Structure==		==About this Structure==
-	1QVA is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA].	+	1QVA is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QVA OCA].

	==Reference==		==Reference==
-	~~Crystallographic structure of the amino terminal domain of yeast initiation factor 4A, a representative DEAD-box RNA helicase., Johnson ER, McKay DB, RNA. 1999 Dec;5(12):1526-34.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/10606264 10606264]~~	+	<ref group="xtra">PMID:10606264</ref><references group="xtra"/>
	[[Category: Saccharomyces cerevisiae]]		[[Category: Saccharomyces cerevisiae]]
-	[[Category: Single protein]]
	[[Category: Johnson, E R.]]		[[Category: Johnson, E R.]]
	[[Category: McKay, D B.]]		[[Category: McKay, D B.]]
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	[[Category: Rna helicase]]		[[Category: Rna helicase]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Tue Jul 29 12~~:40:~~49 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:56:31 2009''