1ud1 - Revision history

OCA at 23:51, 27 December 2023

2023-12-27T23:51:11Z

←Older revision		Revision as of 23:51, 27 December 2023
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	<StructureSection load='1ud1' size='340' side='right'caption='[[1ud1]], [[Resolution\|resolution]] 3.10Å' scene=''>		<StructureSection load='1ud1' size='340' side='right'caption='[[1ud1]], [[Resolution\|resolution]] 3.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Glycine_hispida~~ Glycine ~~hispida~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat">~~<div style='overflow: auto; max~~-~~height: 3em;'>[[1fxz\|1fxz]]~~, [[~~1ucx~~\|~~1ucx~~]]~~</div>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.1Å</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ud1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud1 OCA], [https://pdbe.org/1ud1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ud1 RCSB], [https://www.ebi.ac.uk/pdbsum/1ud1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ud1 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ud1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud1 OCA], [https://pdbe.org/1ud1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ud1 RCSB], [https://www.ebi.ac.uk/pdbsum/1ud1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ud1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/GLYG1_SOYBN GLYG1_SOYBN]] Glycinin is the major seed storage protein of soybean.	+	[https://www.uniprot.org/uniprot/GLYG1_SOYBN GLYG1_SOYBN] Glycinin is the major seed storage protein of soybean.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Glycine ~~hispida~~]]	+	[[Category: Glycine max]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Adachi, M]]	+	[[Category: Adachi M]]
-	[[Category: Utsumi, S]]	+	[[Category: Utsumi S]]
-	~~[[Category: Glycinin]]~~	+
-	~~[[Category: Plant protein]]~~	+
-	~~[[Category: Soybean]]~~	+
-	~~[[Category: Trimer~~]]	+

OCA at 09:40, 29 September 2021

2021-09-29T09:40:29Z

←Older revision		Revision as of 09:40, 29 September 2021
Line 3:		Line 3:
	<StructureSection load='1ud1' size='340' side='right'caption='[[1ud1]], [[Resolution\|resolution]] 3.10Å' scene=''>		<StructureSection load='1ud1' size='340' side='right'caption='[[1ud1]], [[Resolution\|resolution]] 3.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Glycine_hispida Glycine hispida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_hispida Glycine hispida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fxz\|1fxz]], [[1ucx\|1ucx]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1fxz\|1fxz]], [[1ucx\|1ucx]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1ud1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud1 OCA], [~~http~~://pdbe.org/1ud1 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1ud1 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1ud1 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1ud1 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ud1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud1 OCA], [https://pdbe.org/1ud1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ud1 RCSB], [https://www.ebi.ac.uk/pdbsum/1ud1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ud1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/GLYG1_SOYBN GLYG1_SOYBN]] Glycinin is the major seed storage protein of soybean.	+	[[https://www.uniprot.org/uniprot/GLYG1_SOYBN GLYG1_SOYBN]] Glycinin is the major seed storage protein of soybean.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 14:15, 25 December 2019

2019-12-25T14:15:28Z

←Older revision		Revision as of 14:15, 25 December 2019
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	==Crystal structure of proglycinin mutant C88S==		==Crystal structure of proglycinin mutant C88S==
-	<StructureSection load='1ud1' size='340' side='right' caption='[[1ud1]], [[Resolution\|resolution]] 3.10Å' scene=''>	+	<StructureSection load='1ud1' size='340' side='right'caption='[[1ud1]], [[Resolution\|resolution]] 3.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_hispida Glycine hispida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_hispida Glycine hispida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Glycine hispida]]		[[Category: Glycine hispida]]
		+	[[Category: Large Structures]]
	[[Category: Adachi, M]]		[[Category: Adachi, M]]
	[[Category: Utsumi, S]]		[[Category: Utsumi, S]]

OCA at 09:03, 21 March 2018

2018-03-21T09:03:15Z

←Older revision		Revision as of 09:03, 21 March 2018
Line 1:		Line 1:
		+
	==Crystal structure of proglycinin mutant C88S==		==Crystal structure of proglycinin mutant C88S==
	<StructureSection load='1ud1' size='340' side='right' caption='[[1ud1]], [[Resolution\|resolution]] 3.10Å' scene=''>		<StructureSection load='1ud1' size='340' side='right' caption='[[1ud1]], [[Resolution\|resolution]] 3.10Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_hispida Glycine hispida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_hispida Glycine hispida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fxz\|1fxz]], [[1ucx\|1ucx]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fxz\|1fxz]], [[1ucx\|1ucx]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ud1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud1 OCA], [http://pdbe.org/1ud1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ud1 RCSB], [http://www.ebi.ac.uk/pdbsum/1ud1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ud1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud1 OCA], [http://pdbe.org/1ud1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ud1 RCSB], [http://www.ebi.ac.uk/pdbsum/1ud1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ud1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ud/1ud1_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ud/1ud1_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 10:26, 9 February 2016

2016-02-09T10:26:49Z

←Older revision		Revision as of 10:26, 9 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ud1 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 21:21, 10 September 2015

2015-09-10T21:21:48Z

←Older revision		Revision as of 21:21, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='1ud1' size='340' side='right' caption='[[1ud1]], [[Resolution\|resolution]] 3.10Å' scene=''>		<StructureSection load='1ud1' size='340' side='right' caption='[[1ud1]], [[Resolution\|resolution]] 3.10Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Glycine_max~~ Glycine ~~max~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_hispida Glycine hispida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fxz\|1fxz]], [[1ucx\|1ucx]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fxz\|1fxz]], [[1ucx\|1ucx]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ud1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ud1 RCSB], [http://www.ebi.ac.uk/pdbsum/1ud1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ud1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud1 OCA], [http://pdbe.org/1ud1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ud1 RCSB], [http://www.ebi.ac.uk/pdbsum/1ud1 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1ud1" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Glycine ~~max~~]]	+	[[Category: Glycine hispida]]
	[[Category: Adachi, M]]		[[Category: Adachi, M]]
	[[Category: Utsumi, S]]		[[Category: Utsumi, S]]

OCA at 06:15, 25 December 2014

2014-12-25T06:15:29Z

←Older revision		Revision as of 06:15, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>		<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fxz\|1fxz]], [[1ucx\|1ucx]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fxz\|1fxz]], [[1ucx\|1ucx]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ud1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ud1 RCSB], [http://www.ebi.ac.uk/pdbsum/1ud1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ud1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ud1 RCSB], [http://www.ebi.ac.uk/pdbsum/1ud1 PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/GLYG1_SOYBN GLYG1_SOYBN]] Glycinin is the major seed storage protein of soybean.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 29:		Line 31:
	</StructureSection>		</StructureSection>
	[[Category: Glycine max]]		[[Category: Glycine max]]
-	[[Category: Adachi, M.]]	+	[[Category: Adachi, M]]
-	[[Category: Utsumi, S.]]	+	[[Category: Utsumi, S]]
	[[Category: Glycinin]]		[[Category: Glycinin]]
	[[Category: Plant protein]]		[[Category: Plant protein]]
	[[Category: Soybean]]		[[Category: Soybean]]
	[[Category: Trimer]]		[[Category: Trimer]]

OCA at 21:40, 29 September 2014

2014-09-29T21:40:30Z

←Older revision		Revision as of 21:40, 29 September 2014
Line 1:		Line 1:
-	[[~~Image:~~1ud1.~~png~~\|~~left~~\|200px]]	+	==Crystal structure of proglycinin mutant C88S==
		+	<StructureSection load='1ud1' size='340' side='right' caption='[[1ud1]], [[Resolution\|resolution]] 3.10Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1ud1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UD1 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1fxz\|1fxz]], [[1ucx\|1ucx]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ud1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ud1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ud1 RCSB], [http://www.ebi.ac.uk/pdbsum/1ud1 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ud/1ud1_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The constituent subunits of seed storage protein 11S globulin have two disulfide bonds that are common among 11S globulins from legume and nonlegume seeds. In the case of the A1aB1b subunit of soybean 11S globulin, glycinin, Cys12-Cys45 and Cys88-Cys298 are observed by X-ray crystallography. The significance of these two disulfide bonds for structural stability was investigated by mutagenesis of Cys12 to Gly and of Cys88 to Ser. The disulfide bond-deficient mutants C12G and C88S could form the correct conformations identical to that of the wild-type proglycinin except in the vicinities of the mutation sites C12 and C88 as shown by their crystal structures. Thermal stability monitored by differential scanning calorimetry of the mutants indicated that the contribution of these disulfide bonds to the thermal stability of proglycinin A1aB1b is low, although there is a small difference in the extent of the contribution between the two disulfide bonds (Cys12-Cys45 > Cys88-Cys298). The contribution of Cys88-Cys298 to the resistance of proglycinin A1aB1b to proteinase digestion is higher than that of Cys12-Cys45. Possible effects of structure on the different properties of C12G and C88S are discussed.

-	~~{{STRUCTURE_1ud1\| PDB=1ud1 \| SCENE= }}~~	+	Crystal structures and structural stabilities of the disulfide bond-deficient soybean proglycinin mutants C12G and C88S.,Adachi M, Okuda E, Kaneda Y, Hashimoto A, Shutov AD, Becker C, Muntz K, Utsumi S J Agric Food Chem. 2003 Jul 30;51(16):4633-9. PMID:14705889<ref>PMID:14705889</ref>

-	~~===Crystal structure~~ of ~~proglycinin mutant C88S===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_14705889}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1ud1]] is a 3 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Glycine_max Glycine max]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:014705889<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Glycine max]]		[[Category: Glycine max]]
	[[Category: Adachi, M.]]		[[Category: Adachi, M.]]

OCA: Protected "1ud1" [edit=sysop:move=sysop]

2013-01-05T13:04:05Z

Protected "1ud1" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:04, 5 January 2013

OCA at 13:04, 5 January 2013

2013-01-05T13:04:03Z

←Older revision		Revision as of 13:04, 5 January 2013
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-	{{Seed}}
	[[Image:1ud1.png\|left\|200px]]		[[Image:1ud1.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_1ud1", creates the "Structure Box" on the page.
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	{{STRUCTURE_1ud1\| PDB=1ud1 \| SCENE= }}		{{STRUCTURE_1ud1\| PDB=1ud1 \| SCENE= }}

	===Crystal structure of proglycinin mutant C88S===		===Crystal structure of proglycinin mutant C88S===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_14705889}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 14705889 is the PubMed ID number.
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	{{ABSTRACT_PUBMED_14705889}}		{{ABSTRACT_PUBMED_14705889}}

	==About this Structure==		==About this Structure==
-	~~1UD1~~ is a 3 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA].	+	[[1ud1]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UD1 OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~14705889~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:014705889</ref><references group="xtra"/>
	[[Category: Glycine max]]		[[Category: Glycine max]]
	[[Category: Adachi, M.]]		[[Category: Adachi, M.]]
	[[Category: Utsumi, S.]]		[[Category: Utsumi, S.]]
	[[Category: Glycinin]]		[[Category: Glycinin]]
		+	[[Category: Plant protein]]
	[[Category: Soybean]]		[[Category: Soybean]]
	[[Category: Trimer]]		[[Category: Trimer]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 09:08:02 2009''