1wtv - Revision history

OCA at 10:29, 16 August 2023

2023-08-16T10:29:57Z

←Older revision		Revision as of 10:29, 16 August 2023
Line 3:		Line 3:
	<StructureSection load='1wtv' size='340' side='right'caption='[[1wtv]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='1wtv' size='340' side='right'caption='[[1wtv]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Atcc_33909 Atcc 33909~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WTV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfolobus_acidocaldarius Sulfolobus acidocaldarius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WTV FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat">~~<div style='overflow: auto; max~~-~~height: 3em;'>[[1azq\|1azq]]~~, [[~~1wto~~\|~~1wto~~]]~~, [[1wtp\|1wtp]], [[1wtq\|1wtq]], [[1wtr\|1wtr]], [[1wtw\|1wtw]], [[1wtx\|1wtx]]</div>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.6Å</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [https://pdbe.org/1wtv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [https://www.ebi.ac.uk/pdbsum/1wtv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wtv ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [https://pdbe.org/1wtv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [https://www.ebi.ac.uk/pdbsum/1wtv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wtv ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/~~DN71_SULAC DN71_SULAC~~]~~] Constrain~~ negative DNA supercoils~~; may~~ be involved in maintaining the integrity of ~~their~~ genome at high temperature.	+	[https://www.uniprot.org/uniprot/DN7D_SULAC DN7D_SULAC] Can constrain negative DNA supercoils. May be involved in maintaining the integrity of the genome at high temperature.[UniProtKB:P61990]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 33909]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Chen, C J]]	+	[[Category: Sulfolobus acidocaldarius]]
-	[[Category: Chen, C Y]]	+	[[Category: Chen C-J]]
-	[[Category: Chou, C C]]	+	[[Category: Chen C-Y]]
-	[[Category: Ko, T P]]	+	[[Category: Chou C-C]]
-	[[Category: Lin, T W]]	+	[[Category: Ko T-P]]
-	[[Category: Wang~~, A H.~~J]]	+	[[Category: Lin T-W]]
-	~~[[Category: Archea]]~~	+	[[Category: Wang AH-J]]
-	~~[[Category: Complex chromatin protein-dna]]~~	+
-	~~[[Category: Dna binding protein-dna complex]]~~	+
-	~~[[Category: Intercalation]]~~	+
-	~~[[Category: Kinked-dna]]~~	+
-	~~[[Category: Minor-groove dna binding]]~~	+
-	~~[[Category: Sac7d mutant~~]]	+

OCA at 16:27, 27 October 2021

2021-10-27T16:27:18Z

←Older revision		Revision as of 16:27, 27 October 2021
Line 3:		Line 3:
	<StructureSection load='1wtv' size='340' side='right'caption='[[1wtv]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='1wtv' size='340' side='right'caption='[[1wtv]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_33909 Atcc 33909]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1WTV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_33909 Atcc 33909]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WTV FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1azq\|1azq]], [[1wto\|1wto]], [[1wtp\|1wtp]], [[1wtq\|1wtq]], [[1wtr\|1wtr]], [[1wtw\|1wtw]], [[1wtx\|1wtx]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1azq\|1azq]], [[1wto\|1wto]], [[1wtp\|1wtp]], [[1wtq\|1wtq]], [[1wtr\|1wtr]], [[1wtw\|1wtw]], [[1wtx\|1wtx]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [~~http~~://pdbe.org/1wtv PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/1wtv PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=1wtv ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [https://pdbe.org/1wtv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [https://www.ebi.ac.uk/pdbsum/1wtv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wtv ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/DN71_SULAC DN71_SULAC]] Constrain negative DNA supercoils; may be involved in maintaining the integrity of their genome at high temperature.	+	[[https://www.uniprot.org/uniprot/DN71_SULAC DN71_SULAC]] Constrain negative DNA supercoils; may be involved in maintaining the integrity of their genome at high temperature.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 17:51, 22 January 2020

2020-01-22T17:51:32Z

←Older revision		Revision as of 17:51, 22 January 2020
Line 1:		Line 1:

	==Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC==		==Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC==
-	<StructureSection load='1wtv' size='340' side='right' caption='[[1wtv]], [[Resolution\|resolution]] 1.60Å' scene=''>	+	<StructureSection load='1wtv' size='340' side='right'caption='[[1wtv]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33909 Atcc 33909]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WTV FirstGlance]. <br>		<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33909 Atcc 33909]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WTV FirstGlance]. <br>
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 33909]]		[[Category: Atcc 33909]]
		+	[[Category: Large Structures]]
	[[Category: Chen, C J]]		[[Category: Chen, C J]]
	[[Category: Chen, C Y]]		[[Category: Chen, C Y]]

OCA at 16:34, 11 April 2018

2018-04-11T16:34:20Z

←Older revision		Revision as of 16:34, 11 April 2018
Line 1:		Line 1:
		+
	==Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC==		==Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC==
	<StructureSection load='1wtv' size='340' side='right' caption='[[1wtv]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='1wtv' size='340' side='right' caption='[[1wtv]], [[Resolution\|resolution]] 1.60Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33909 Atcc 33909]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WTV FirstGlance]. <br>		<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33909 Atcc 33909]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WTV FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1azq\|1azq]], [[1wto\|1wto]], [[1wtp\|1wtp]], [[1wtq\|1wtq]], [[1wtr\|1wtr]], [[1wtw\|1wtw]], [[1wtx\|1wtx]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1azq\|1azq]], [[1wto\|1wto]], [[1wtp\|1wtp]], [[1wtq\|1wtq]], [[1wtr\|1wtr]], [[1wtw\|1wtw]], [[1wtx\|1wtx]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [http://pdbe.org/1wtv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [http://www.ebi.ac.uk/pdbsum/1wtv PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [http://pdbe.org/1wtv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [http://www.ebi.ac.uk/pdbsum/1wtv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1wtv ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 02:00, 11 September 2015

2015-09-11T02:00:42Z

←Older revision		Revision as of 02:00, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='1wtv' size='340' side='right' caption='[[1wtv]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='1wtv' size='340' side='right' caption='[[1wtv]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Sulfolobus_acidocaldarius Sulfolobus acidocaldarius~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WTV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_33909 Atcc 33909]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WTV FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1azq\|1azq]], [[1wto\|1wto]], [[1wtp\|1wtp]], [[1wtq\|1wtq]], [[1wtr\|1wtr]], [[1wtw\|1wtw]], [[1wtx\|1wtx]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1azq\|1azq]], [[1wto\|1wto]], [[1wtp\|1wtp]], [[1wtq\|1wtq]], [[1wtr\|1wtr]], [[1wtw\|1wtw]], [[1wtx\|1wtx]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [http://www.ebi.ac.uk/pdbsum/1wtv PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [http://pdbe.org/1wtv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [http://www.ebi.ac.uk/pdbsum/1wtv PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 16:		Line 16:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 1wtv" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Sulfolobus acidocaldarius~~]]	+	[[Category: Atcc 33909]]
	[[Category: Chen, C J]]		[[Category: Chen, C J]]
	[[Category: Chen, C Y]]		[[Category: Chen, C Y]]

OCA at 09:31, 25 December 2014

2014-12-25T09:31:42Z

←Older revision		Revision as of 09:31, 25 December 2014
Line 6:		Line 6:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [http://www.ebi.ac.uk/pdbsum/1wtv PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [http://www.ebi.ac.uk/pdbsum/1wtv PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/DN71_SULAC DN71_SULAC]] Constrain negative DNA supercoils; may be involved in maintaining the integrity of their genome at high temperature.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 05:55, 22 December 2014

2014-12-22T05:55:38Z

←Older revision		Revision as of 05:55, 22 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_acidocaldarius Sulfolobus acidocaldarius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WTV FirstGlance]. <br>		<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_acidocaldarius Sulfolobus acidocaldarius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WTV FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1azq\|1azq]], [[1wto\|1wto]], [[1wtp\|1wtp]], [[1wtq\|1wtq]], [[1wtr\|1wtr]], [[1wtw\|1wtw]], [[1wtx\|1wtx]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1azq\|1azq]], [[1wto\|1wto]], [[1wtp\|1wtp]], [[1wtq\|1wtq]], [[1wtr\|1wtr]], [[1wtw\|1wtw]], [[1wtx\|1wtx]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [http://www.ebi.ac.uk/pdbsum/1wtv PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [http://www.ebi.ac.uk/pdbsum/1wtv PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 19:		Line 19:
	</StructureSection>		</StructureSection>
	[[Category: Sulfolobus acidocaldarius]]		[[Category: Sulfolobus acidocaldarius]]
-	[[Category: Chen, C J.]]	+	[[Category: Chen, C J]]
-	[[Category: Chen, C Y.]]	+	[[Category: Chen, C Y]]
-	[[Category: Chou, C C.]]	+	[[Category: Chou, C C]]
-	[[Category: Ko, T P.]]	+	[[Category: Ko, T P]]
-	[[Category: Lin, T W.]]	+	[[Category: Lin, T W]]
-	[[Category: Wang, A H.J.]]	+	[[Category: Wang, A H.J]]
	[[Category: Archea]]		[[Category: Archea]]
	[[Category: Complex chromatin protein-dna]]		[[Category: Complex chromatin protein-dna]]

OCA at 07:07, 9 June 2014

2014-06-09T07:07:51Z

←Older revision		Revision as of 07:07, 9 June 2014
Line 1:		Line 1:
-	[[~~Image:~~1wtv.~~png~~\|~~left~~\|~~200px~~]]	+	==Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC==
		+	<StructureSection load='1wtv' size='340' side='right' caption='[[1wtv]], [[Resolution\|resolution]] 1.60Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[1wtv]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_acidocaldarius Sulfolobus acidocaldarius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WTV FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1azq\|1azq]], [[1wto\|1wto]], [[1wtp\|1wtp]], [[1wtq\|1wtq]], [[1wtr\|1wtr]], [[1wtw\|1wtw]], [[1wtx\|1wtx]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wtv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1wtv RCSB], [http://www.ebi.ac.uk/pdbsum/1wtv PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Sac7d, a small, abundant, sequence-general DNA-binding protein from the hyperthermophilic archaeon Sulfolobus acidocaldarius, causes a single-step sharp kink in DNA (approximately 60 degrees) via the intercalation of both Val26 and Met29. These two amino acids were systematically changed in size to probe their effects on DNA kinking. Eight crystal structures of five Sac7d mutant-DNA complexes have been analyzed. The DNA-binding pattern of the V26A and M29A single mutants is similar to that of the wild-type, whereas the V26A/M29A protein binds DNA without side chain intercalation, resulting in a smaller overall bending (approximately 50 degrees). The M29F mutant inserts the Phe29 side chain orthogonally to the C2pG3 step without stacking with base pairs, inducing a sharp kink (approximately 80 degrees). In the V26F/M29F-GCGATCGC complex, Phe26 intercalates deeply into DNA bases by stacking with the G3 base, whereas Phe29 is stacked on the G15 deoxyribose, in a way similar to those used by the TATA box-binding proteins. All mutants have reduced DNA-stabilizing ability, as indicated by their lower T m values. The DNA kink patterns caused by different combinations of hydrophobic side chains may be relevant in understanding the manner by which other minor groove-binding proteins interact with DNA.

-	~~{{STRUCTURE_1wtv\| PDB=1wtv \| SCENE= }}~~	+	Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d.,Chen CY, Ko TP, Lin TW, Chou CC, Chen CJ, Wang AH Nucleic Acids Res. 2005 Jan 14;33(1):430-8. Print 2005. PMID:15653643<ref>PMID:15653643</ref>

-	~~===Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_15653643}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[1wtv]] is~~ a ~~3 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Sulfolobus_acidocaldarius Sulfolobus acidocaldarius]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:015653643<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Sulfolobus acidocaldarius]]		[[Category: Sulfolobus acidocaldarius]]
	[[Category: Chen, C J.]]		[[Category: Chen, C J.]]

OCA: Protected "1wtv" [edit=sysop:move=sysop]

2012-08-14T16:23:59Z

Protected "1wtv" [edit=sysop:move=sysop]

←Older revision

Revision as of 16:23, 14 August 2012

OCA at 16:23, 14 August 2012

2012-08-14T16:23:58Z

←Older revision		Revision as of 16:23, 14 August 2012
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-	{{Seed}}
	[[Image:1wtv.png\|left\|200px]]		[[Image:1wtv.png\|left\|200px]]

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	{{STRUCTURE_1wtv\| PDB=1wtv \| SCENE= }}		{{STRUCTURE_1wtv\| PDB=1wtv \| SCENE= }}

	===Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC===		===Hyperthermophile chromosomal protein SAC7D single mutant M29A in complex with DNA GTAATTAC===

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	{{ABSTRACT_PUBMED_15653643}}		{{ABSTRACT_PUBMED_15653643}}

	==About this Structure==		==About this Structure==
-	~~1WTV is a~~ [[~~Single protein~~]] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_acidocaldarius Sulfolobus acidocaldarius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA].	+	[[1wtv]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_acidocaldarius Sulfolobus acidocaldarius]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WTV OCA].

	==Reference==		==Reference==
-	~~Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d., Chen CY, Ko TP, Lin TW, Chou CC, Chen CJ, Wang AH, Nucleic Acids Res. 2005 Jan 14;33(1):430-8. Print 2005.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/15653643 15653643]~~	+	<ref group="xtra">PMID:015653643</ref><references group="xtra"/>
-	~~[[Category: Single protein]]~~	+
	[[Category: Sulfolobus acidocaldarius]]		[[Category: Sulfolobus acidocaldarius]]
	[[Category: Chen, C J.]]		[[Category: Chen, C J.]]
Line 33:		Line 20:
	[[Category: Wang, A H.J.]]		[[Category: Wang, A H.J.]]
	[[Category: Archea]]		[[Category: Archea]]
-	[[Category: Complex chromatin protein/dna]]	+	[[Category: Complex chromatin protein-dna]]
		+	[[Category: Dna binding protein-dna complex]]
	[[Category: Intercalation]]		[[Category: Intercalation]]
	[[Category: Kinked-dna]]		[[Category: Kinked-dna]]
	[[Category: Minor-groove dna binding]]		[[Category: Minor-groove dna binding]]
	[[Category: Sac7d mutant]]		[[Category: Sac7d mutant]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 17:07:56 2008''