2bw3 - Revision history

OCA at 11:24, 22 May 2024

2024-05-22T11:24:16Z

←Older revision		Revision as of 11:24, 22 May 2024
Line 3:		Line 3:
	<StructureSection load='2bw3' size='340' side='right'caption='[[2bw3]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2bw3' size='340' side='right'caption='[[2bw3]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~House_fly House fly~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Musca_domestica Musca domestica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non~~-~~Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bw3 OCA], [https://pdbe.org/2bw3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bw3 RCSB], [https://www.ebi.ac.uk/pdbsum/2bw3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bw3 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bw3 OCA], [https://pdbe.org/2bw3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bw3 RCSB], [https://www.ebi.ac.uk/pdbsum/2bw3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bw3 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q25438_MUSDO Q25438_MUSDO]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 33:		Line 36:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: House fly]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Craig~~, N L~~]]	+	[[Category: Musca domestica]]
-	[[Category: Dyda, F]]	+	[[Category: Craig NL]]
-	[[Category: Ghirlando, R]]	+	[[Category: Dyda F]]
-	[[Category: Hickman~~, A B~~]]	+	[[Category: Ghirlando R]]
-	[[Category: Hinshaw~~, J E~~]]	+	[[Category: Hickman AB]]
-	[[Category: Musingarimi, P]]	+	[[Category: Hinshaw JE]]
-	[[Category: Perez~~, Z N~~]]	+	[[Category: Musingarimi P]]
-	[[Category: Zhou, L]]	+	[[Category: Perez ZN]]
-	~~[[Category: Dna recombination]]~~	+	[[Category: Zhou L]]
-	~~[[Category: Transposition~~]]	+

OCA at 13:19, 24 November 2021

2021-11-24T13:19:01Z

←Older revision		Revision as of 13:19, 24 November 2021
Line 3:		Line 3:
	<StructureSection load='2bw3' size='340' side='right'caption='[[2bw3]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2bw3' size='340' side='right'caption='[[2bw3]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/House_fly House fly]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/House_fly House fly]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2bw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bw3 OCA], [~~http~~://pdbe.org/2bw3 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2bw3 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2bw3 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2bw3 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bw3 OCA], [https://pdbe.org/2bw3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bw3 RCSB], [https://www.ebi.ac.uk/pdbsum/2bw3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bw3 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 28:		Line 28:

	==See Also==		==See Also==
-	*[[Transposase\|Transposase]]	+	*[[Transposase 3D structures\|Transposase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 08:08, 19 February 2020

2020-02-19T08:08:37Z

←Older revision		Revision as of 08:08, 19 February 2020
Line 1:		Line 1:

	==Three-dimensional structure of the Hermes DNA transposase==		==Three-dimensional structure of the Hermes DNA transposase==
-	<StructureSection load='2bw3' size='340' side='right' caption='[[2bw3]], [[Resolution\|resolution]] 2.00Å' scene=''>	+	<StructureSection load='2bw3' size='340' side='right'caption='[[2bw3]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/House_fly House fly]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/House_fly House fly]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>
Line 34:		Line 34:
	</StructureSection>		</StructureSection>
	[[Category: House fly]]		[[Category: House fly]]
		+	[[Category: Large Structures]]
	[[Category: Craig, N L]]		[[Category: Craig, N L]]
	[[Category: Dyda, F]]		[[Category: Dyda, F]]

OCA at 06:35, 16 May 2018

2018-05-16T06:35:11Z

←Older revision		Revision as of 06:35, 16 May 2018
Line 1:		Line 1:
-	==~~THREE~~-~~DIMENSIONAL STRUCTURE OF THE HERMES~~ DNA ~~TRANSPOSASE~~==	+
		+	==Three-dimensional structure of the Hermes DNA transposase==
	<StructureSection load='2bw3' size='340' side='right' caption='[[2bw3]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2bw3' size='340' side='right' caption='[[2bw3]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/House_fly House fly]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/House_fly House fly]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bw3 OCA], [http://pdbe.org/2bw3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bw3 RCSB], [http://www.ebi.ac.uk/pdbsum/2bw3 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bw3 OCA], [http://pdbe.org/2bw3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bw3 RCSB], [http://www.ebi.ac.uk/pdbsum/2bw3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2bw3 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 10:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bw/2bw3_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bw/2bw3_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 13:29, 9 February 2016

2016-02-09T13:29:55Z

←Older revision		Revision as of 13:29, 9 February 2016
Line 14:		Line 14:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bw3 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 22:42, 10 September 2015

2015-09-10T22:42:13Z

←Older revision		Revision as of 22:42, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2bw3' size='340' side='right' caption='[[2bw3]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2bw3' size='340' side='right' caption='[[2bw3]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Musca_domestica Musca domestica~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/House_fly House fly]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bw3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bw3 RCSB], [http://www.ebi.ac.uk/pdbsum/2bw3 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bw3 OCA], [http://pdbe.org/2bw3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2bw3 RCSB], [http://www.ebi.ac.uk/pdbsum/2bw3 PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 24:		Line 24:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2bw3" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 31:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Musca domestica~~]]	+	[[Category: House fly]]
	[[Category: Craig, N L]]		[[Category: Craig, N L]]
	[[Category: Dyda, F]]		[[Category: Dyda, F]]

OCA at 16:43, 15 January 2015

2015-01-15T16:43:48Z

←Older revision		Revision as of 16:43, 15 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Musca_domestica Musca domestica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Musca_domestica Musca domestica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bw3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bw3 RCSB], [http://www.ebi.ac.uk/pdbsum/2bw3 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bw3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bw3 RCSB], [http://www.ebi.ac.uk/pdbsum/2bw3 PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 32:
	</StructureSection>		</StructureSection>
	[[Category: Musca domestica]]		[[Category: Musca domestica]]
-	[[Category: Craig, N L.]]	+	[[Category: Craig, N L]]
-	[[Category: Dyda, F.]]	+	[[Category: Dyda, F]]
-	[[Category: Ghirlando, R.]]	+	[[Category: Ghirlando, R]]
-	[[Category: Hickman, A B.]]	+	[[Category: Hickman, A B]]
-	[[Category: Hinshaw, J E.]]	+	[[Category: Hinshaw, J E]]
-	[[Category: Musingarimi, P.]]	+	[[Category: Musingarimi, P]]
-	[[Category: Perez, Z N.]]	+	[[Category: Perez, Z N]]
-	[[Category: Zhou, L.]]	+	[[Category: Zhou, L]]
	[[Category: Dna recombination]]		[[Category: Dna recombination]]
	[[Category: Transposition]]		[[Category: Transposition]]

OCA at 00:14, 30 September 2014

2014-09-30T00:14:35Z

←Older revision		Revision as of 00:14, 30 September 2014
Line 1:		Line 1:
-	[[~~Image~~:2bw3.~~png\|left~~\|200px]]	+	==THREE-DIMENSIONAL STRUCTURE OF THE HERMES DNA TRANSPOSASE==
		+	<StructureSection load='2bw3' size='340' side='right' caption='[[2bw3]], [[Resolution\|resolution]] 2.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2bw3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Musca_domestica Musca domestica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2BW3 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bw3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bw3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2bw3 RCSB], [http://www.ebi.ac.uk/pdbsum/2bw3 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bw/2bw3_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Mobile elements and their inactive remnants account for large proportions of most eukaryotic genomes, where they have had central roles in genome evolution. Over 50 years ago, McClintock reported a form of stress-induced genome instability in maize in which discrete DNA segments move between chromosomal locations. Our current mechanistic understanding of enzymes catalyzing transposition is largely limited to prokaryotic transposases. The Hermes transposon from the housefly is part of the eukaryotic hAT superfamily that includes hobo from Drosophila, McClintock's maize Activator and Tam3 from snapdragon. We report here the three-dimensional structure of a functionally active form of the transposase from Hermes at 2.1-A resolution. The Hermes protein has some structural features of prokaryotic transposases, including a domain with a retroviral integrase fold. However, this domain is disrupted by the insertion of an additional domain. Finally, transposition is observed only when Hermes assembles into a hexamer.

-	~~{{STRUCTURE_2bw3\| PDB=2bw3 \| SCENE= }}~~	+	Molecular architecture of a eukaryotic DNA transposase.,Hickman AB, Perez ZN, Zhou L, Musingarimi P, Ghirlando R, Hinshaw JE, Craig NL, Dyda F Nat Struct Mol Biol. 2005 Aug;12(8):715-21. Epub 2005 Jul 24. PMID:16041385<ref>PMID:16041385</ref>

-	~~===THREE-DIMENSIONAL STRUCTURE OF THE HERMES DNA TRANSPOSASE===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>

-	~~{{ABSTRACT_PUBMED_16041385}}~~	+	==See Also==
-		+	*[[Transposase\|Transposase]]
-	==~~About this Structure~~==	+	== References ==
-	[[~~2bw3~~]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Musca_domestica Musca domestica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA].	+	<references/>
-		+	__TOC__
-	==~~Reference~~==	+	</StructureSection>
-	<~~ref group="xtra">PMID:016041385<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Musca domestica]]		[[Category: Musca domestica]]
	[[Category: Craig, N L.]]		[[Category: Craig, N L.]]

OCA: Protected "2bw3" [edit=sysop:move=sysop]

2013-01-06T09:39:24Z

Protected "2bw3" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:39, 6 January 2013

OCA at 09:39, 6 January 2013

2013-01-06T09:39:22Z

←Older revision		Revision as of 09:39, 6 January 2013
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	[[Image:2bw3.png\|left\|200px]]		[[Image:2bw3.png\|left\|200px]]

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	{{STRUCTURE_2bw3\| PDB=2bw3 \| SCENE= }}		{{STRUCTURE_2bw3\| PDB=2bw3 \| SCENE= }}

	===THREE-DIMENSIONAL STRUCTURE OF THE HERMES DNA TRANSPOSASE===		===THREE-DIMENSIONAL STRUCTURE OF THE HERMES DNA TRANSPOSASE===

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	{{ABSTRACT_PUBMED_16041385}}		{{ABSTRACT_PUBMED_16041385}}

	==About this Structure==		==About this Structure==
-	~~2BW3~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Musca_domestica Musca domestica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA].	+	[[2bw3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Musca_domestica Musca domestica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BW3 OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~16041385~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:016041385</ref><references group="xtra"/>
	[[Category: Musca domestica]]		[[Category: Musca domestica]]
	[[Category: Craig, N L.]]		[[Category: Craig, N L.]]
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	[[Category: Dna recombination]]		[[Category: Dna recombination]]
	[[Category: Transposition]]		[[Category: Transposition]]
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-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 10:08:16 2009''