2c7k - Revision history

OCA at 14:07, 13 December 2023

2023-12-13T14:07:53Z

←Older revision		Revision as of 14:07, 13 December 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2c7k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mastigocladus_laminosus Mastigocladus laminosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C7K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2C7K FirstGlance]. <br>		<table><tr><td colspan='2'>[[2c7k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mastigocladus_laminosus Mastigocladus laminosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C7K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2C7K FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>~~, ~~<scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.2Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[2c7j\|2c7j]]~~, ~~[[2c7l\|2c7l]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2c7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c7k OCA], [https://pdbe.org/2c7k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2c7k RCSB], [https://www.ebi.ac.uk/pdbsum/2c7k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2c7k ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2c7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c7k OCA], [https://pdbe.org/2c7k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2c7k RCSB], [https://www.ebi.ac.uk/pdbsum/2c7k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2c7k ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/PHEA_MASLA PHEA_MASLA~~]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. [[https://www.uniprot.org/uniprot/PHEB_MASLA PHEB_MASLA]~~] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.	+	[https://www.uniprot.org/uniprot/PHEA_MASLA PHEA_MASLA] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 35:		Line 35:
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Mastigocladus laminosus]]		[[Category: Mastigocladus laminosus]]
-	[[Category: Krasselt, A]]	+	[[Category: Krasselt A]]
-	[[Category: Reuter, W]]	+	[[Category: Reuter W]]
-	[[Category: Schmidt, M]]	+	[[Category: Schmidt M]]
-	~~[[Category: Antenna protein]]~~	+
-	~~[[Category: Bile pigment]]~~	+
-	~~[[Category: Chromophore]]~~	+
-	~~[[Category: Electron transport]]~~	+
-	~~[[Category: Photosynthesis]]~~	+
-	~~[[Category: Phycobilisome]]~~	+
-	~~[[Category: Phycocyanobilin]]~~	+
-	~~[[Category: Phycoerythrocyanin]]~~	+
-	~~[[Category: Phycoviolobilin~~]]	+

OCA at 10:33, 17 February 2021

2021-02-17T10:33:35Z

←Older revision		Revision as of 10:33, 17 February 2021
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	<StructureSection load='2c7k' size='340' side='right'caption='[[2c7k]], [[Resolution\|resolution]] 3.20Å' scene=''>		<StructureSection load='2c7k' size='340' side='right'caption='[[2c7k]], [[Resolution\|resolution]] 3.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2c7k]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Mastigocladus_laminosus Mastigocladus laminosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C7K OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2C7K FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2c7k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mastigocladus_laminosus Mastigocladus laminosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C7K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2C7K FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2c7j\|2c7j]], [[2c7l\|2c7l]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2c7j\|2c7j]], [[2c7l\|2c7l]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2c7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c7k OCA], [~~http~~://pdbe.org/2c7k PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2c7k RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2c7k PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2c7k ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2c7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c7k OCA], [https://pdbe.org/2c7k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2c7k RCSB], [https://www.ebi.ac.uk/pdbsum/2c7k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2c7k ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/PHEA_MASLA PHEA_MASLA]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. [[~~http~~://www.uniprot.org/uniprot/PHEB_MASLA PHEB_MASLA]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.	+	[[https://www.uniprot.org/uniprot/PHEA_MASLA PHEA_MASLA]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. [[https://www.uniprot.org/uniprot/PHEB_MASLA PHEB_MASLA]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 07:24, 3 April 2019

2019-04-03T07:24:06Z

←Older revision		Revision as of 07:24, 3 April 2019
Line 1:		Line 1:

	==Laue structure of phycoerythrocyanin from Mastigocladus laminosus==		==Laue structure of phycoerythrocyanin from Mastigocladus laminosus==
-	<StructureSection load='2c7k' size='340' side='right' caption='[[2c7k]], [[Resolution\|resolution]] 3.20Å' scene=''>	+	<StructureSection load='2c7k' size='340' side='right'caption='[[2c7k]], [[Resolution\|resolution]] 3.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2c7k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mastigocladus_laminosus Mastigocladus laminosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C7K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2C7K FirstGlance]. <br>		<table><tr><td colspan='2'>[[2c7k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mastigocladus_laminosus Mastigocladus laminosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C7K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2C7K FirstGlance]. <br>
Line 33:		Line 33:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Mastigocladus laminosus]]		[[Category: Mastigocladus laminosus]]
	[[Category: Krasselt, A]]		[[Category: Krasselt, A]]

OCA at 08:14, 12 December 2018

2018-12-12T08:14:00Z

←Older revision		Revision as of 08:14, 12 December 2018
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c7/2c7k_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c7/2c7k_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 16:06, 25 January 2017

2017-01-25T16:06:43Z

←Older revision		Revision as of 16:06, 25 January 2017
Line 1:		Line 1:
-	==~~LAUE STRUCTURE OF PHYCOERYTHROCYANIN FROM MASTIGOCLADUS LAMINOSUS~~==	+
		+	==Laue structure of phycoerythrocyanin from Mastigocladus laminosus==
	<StructureSection load='2c7k' size='340' side='right' caption='[[2c7k]], [[Resolution\|resolution]] 3.20Å' scene=''>		<StructureSection load='2c7k' size='340' side='right' caption='[[2c7k]], [[Resolution\|resolution]] 3.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2c7j\|2c7j]], [[2c7l\|2c7l]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2c7j\|2c7j]], [[2c7l\|2c7l]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c7k OCA], [http://pdbe.org/2c7k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2c7k RCSB], [http://www.ebi.ac.uk/pdbsum/2c7k PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c7k OCA], [http://pdbe.org/2c7k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2c7k RCSB], [http://www.ebi.ac.uk/pdbsum/2c7k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2c7k ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 22:22, 8 February 2016

2016-02-08T22:22:42Z

←Older revision		Revision as of 22:22, 8 February 2016
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2c7k ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 15:55, 10 September 2015

2015-09-10T15:55:36Z

←Older revision		Revision as of 15:55, 10 September 2015
Line 5:		Line 5:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2c7j\|2c7j]], [[2c7l\|2c7l]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2c7j\|2c7j]], [[2c7l\|2c7l]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c7k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2c7k RCSB], [http://www.ebi.ac.uk/pdbsum/2c7k PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c7k OCA], [http://pdbe.org/2c7k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2c7k RCSB], [http://www.ebi.ac.uk/pdbsum/2c7k PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 27:		Line 27:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2c7k" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 02:31, 25 December 2014

2014-12-25T02:31:33Z

←Older revision		Revision as of 02:31, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2c7k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mastigocladus_laminosus Mastigocladus laminosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C7K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2C7K FirstGlance]. <br>		<table><tr><td colspan='2'>[[2c7k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mastigocladus_laminosus Mastigocladus laminosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C7K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2C7K FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2c7j\|2c7j]], [[2c7l\|2c7l]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2c7j\|2c7j]], [[2c7l\|2c7l]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c7k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2c7k RCSB], [http://www.ebi.ac.uk/pdbsum/2c7k PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c7k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2c7k RCSB], [http://www.ebi.ac.uk/pdbsum/2c7k PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/PHEA_MASLA PHEA_MASLA]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. [[http://www.uniprot.org/uniprot/PHEB_MASLA PHEB_MASLA]] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 30:		Line 32:
	</StructureSection>		</StructureSection>
	[[Category: Mastigocladus laminosus]]		[[Category: Mastigocladus laminosus]]
-	[[Category: Krasselt, A.]]	+	[[Category: Krasselt, A]]
-	[[Category: Reuter, W.]]	+	[[Category: Reuter, W]]
-	[[Category: Schmidt, M.]]	+	[[Category: Schmidt, M]]
	[[Category: Antenna protein]]		[[Category: Antenna protein]]
	[[Category: Bile pigment]]		[[Category: Bile pigment]]

OCA at 02:57, 30 September 2014

2014-09-30T02:57:53Z

←Older revision		Revision as of 02:57, 30 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2c7k.~~png~~\|~~left~~\|200px]]	+	==LAUE STRUCTURE OF PHYCOERYTHROCYANIN FROM MASTIGOCLADUS LAMINOSUS==
		+	<StructureSection load='2c7k' size='340' side='right' caption='[[2c7k]], [[Resolution\|resolution]] 3.20Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2c7k]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mastigocladus_laminosus Mastigocladus laminosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C7K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2C7K FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2c7j\|2c7j]], [[2c7l\|2c7l]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c7k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c7k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2c7k RCSB], [http://www.ebi.ac.uk/pdbsum/2c7k PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c7/2c7k_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Phycoerythrocyanin is the only cyanobacterial phycobiliprotein containing phycoviolobilin as a chromophore. The phycoviolobilin chromophore is photo-reactive; upon irradiation, the chromophore undergoes a Z/E-isomerization involving the rotation of pyrrole-ring D. We have determined the structure of trimeric phycoerythrocyanin at three different experimental settings: monochromatically at 110 K and 295 K as well as with the Laue method at 288 K. Based on their chemical structures, the restraints for the phycoviolobilin of the alpha-subunit and for the phycocyanobilin chromophores of the beta-subunit were newly generated, which allows a chemically meaningful refinement of both chromophores. All three phycoerythrocyanin structures are very similar; the subunits match within 0.5 A. The detailed comparison of the data obtained with the different measurements provided information about the protein properties around the phycoviolobilin chromophore. For the first time, crystals of a phycobilisome protein are used successfully with the Laue technique. This paves the way for time-resolved macromolecular crystallography, which is able to elucidate the exact mechanisms of the phycoviolobilin photoactivity including the protein involvement.

-	~~{{STRUCTURE_2c7k\| PDB=2c7k \| SCENE= }}~~	+	Local protein flexibility as a prerequisite for reversible chromophore isomerization in alpha-phycoerythrocyanin.,Schmidt M, Krasselt A, Reuter W Biochim Biophys Acta. 2006 Jan;1764(1):55-62. Epub 2005 Nov 21. PMID:16377266<ref>PMID:16377266</ref>

-	~~===LAUE STRUCTURE OF PHYCOERYTHROCYANIN FROM MASTIGOCLADUS LAMINOSUS===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_16377266}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[2c7k]] is~~ a ~~2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Mastigocladus_laminosus Mastigocladus laminosus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2C7K OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:016377266<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Mastigocladus laminosus]]		[[Category: Mastigocladus laminosus]]
	[[Category: Krasselt, A.]]		[[Category: Krasselt, A.]]

OCA: Protected "2c7k" [edit=sysop:move=sysop]

2013-01-06T12:07:57Z

Protected "2c7k" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:07, 6 January 2013