2cjf - Revision history

OCA at 14:19, 13 December 2023

2023-12-13T14:19:10Z

←Older revision		Revision as of 14:19, 13 December 2023
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	<StructureSection load='2cjf' size='340' side='right'caption='[[2cjf]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='2cjf' size='340' side='right'caption='[[2cjf]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2cjf]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"actinomyces_coelicolor"_(muller_1908)_lieske_1921 "actinomyces~~ coelicolor~~" (muller 1908) lieske 1921~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CJF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2cjf]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CJF FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RP4:(1S,4S,5S)-1,4,5-TRIHYDROXY-3-[3-(PHENYLTHIO)PHENYL]CYCLOHEX-2-ENE-1-CARBOXYLIC+ACID'>RP4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.95Å</td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1d0i\|1d0i]], [[1gtz\|1gtz]], [[1gu0\|1gu0]], [[1gu1\|1gu1]], [[1v1j\|1v1j]], [[2bt4\|2bt4]]</div></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RP4:(1S,4S,5S)-1,4,5-TRIHYDROXY-3-[3-(PHENYLTHIO)PHENYL]CYCLOHEX-2-ENE-1-CARBOXYLIC+ACID'>RP4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cjf OCA], [https://pdbe.org/2cjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cjf RCSB], [https://www.ebi.ac.uk/pdbsum/2cjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cjf ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cjf OCA], [https://pdbe.org/2cjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cjf RCSB], [https://www.ebi.ac.uk/pdbsum/2cjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cjf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/AROQ_STRCO AROQ_STRCO]] Catalyzes a trans-dehydration via an enolate intermediate (By similarity).[HAMAP-Rule:MF_00169]	+	[https://www.uniprot.org/uniprot/AROQ_STRCO AROQ_STRCO] Catalyzes a trans-dehydration via an enolate intermediate (By similarity).[HAMAP-Rule:MF_00169]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: 3-dehydroquinate dehydratase]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Abell~~, A D~~]]	+	[[Category: Streptomyces coelicolor]]
-	[[Category: Abell, C]]	+	[[Category: Abell AD]]
-	[[Category: Lapthorn~~, A J~~]]	+	[[Category: Abell C]]
-	[[Category: Payne~~, R J~~]]	+	[[Category: Lapthorn AJ]]
-	[[Category: Riboldi-Tunnicliffe, A]]	+	[[Category: Payne RJ]]
-	~~[[Category: Amino-acid biosynthesis]]~~	+	[[Category: Riboldi-Tunnicliffe A]]
-	~~[[Category: Aromatic amino acid biosynthesis]]~~	+
-	~~[[Category: Dehydroquinase]]~~	+
-	~~[[Category: Dehydroquinate]]~~	+
-	~~[[Category: Drug design]]~~	+
-	~~[[Category: Lyase]]~~	+
-	~~[[Category: Shikimate pathway~~]]	+

OCA at 10:34, 17 February 2021

2021-02-17T10:34:46Z

←Older revision		Revision as of 10:34, 17 February 2021
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	<StructureSection load='2cjf' size='340' side='right'caption='[[2cjf]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='2cjf' size='340' side='right'caption='[[2cjf]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2cjf]] is a 12 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"actinomyces_coelicolor"_(muller_1908)_lieske_1921 "actinomyces coelicolor" (muller 1908) lieske 1921]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2CJF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2cjf]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/"actinomyces_coelicolor"_(muller_1908)_lieske_1921 "actinomyces coelicolor" (muller 1908) lieske 1921]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CJF FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RP4:(1S,4S,5S)-1,4,5-TRIHYDROXY-3-[3-(PHENYLTHIO)PHENYL]CYCLOHEX-2-ENE-1-CARBOXYLIC+ACID'>RP4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RP4:(1S,4S,5S)-1,4,5-TRIHYDROXY-3-[3-(PHENYLTHIO)PHENYL]CYCLOHEX-2-ENE-1-CARBOXYLIC+ACID'>RP4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1d0i\|1d0i]], [[1gtz\|1gtz]], [[1gu0\|1gu0]], [[1gu1\|1gu1]], [[1v1j\|1v1j]], [[2bt4\|2bt4]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1d0i\|1d0i]], [[1gtz\|1gtz]], [[1gu0\|1gu0]], [[1gu1\|1gu1]], [[1v1j\|1v1j]], [[2bt4\|2bt4]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2cjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cjf OCA], [~~http~~://pdbe.org/2cjf PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2cjf RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2cjf PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2cjf ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cjf OCA], [https://pdbe.org/2cjf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cjf RCSB], [https://www.ebi.ac.uk/pdbsum/2cjf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cjf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/AROQ_STRCO AROQ_STRCO]] Catalyzes a trans-dehydration via an enolate intermediate (By similarity).[HAMAP-Rule:MF_00169]	+	[[https://www.uniprot.org/uniprot/AROQ_STRCO AROQ_STRCO]] Catalyzes a trans-dehydration via an enolate intermediate (By similarity).[HAMAP-Rule:MF_00169]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 23:

	==See Also==		==See Also==
-	*[[Dehydroquinase\|Dehydroquinase]]	+	*[[Dehydroquinase 3D structures\|Dehydroquinase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 12:00, 10 May 2019

2019-05-10T12:00:16Z

←Older revision		Revision as of 12:00, 10 May 2019
Line 1:		Line 1:

	==TYPE II DEHYDROQUINASE INHIBITOR COMPLEX==		==TYPE II DEHYDROQUINASE INHIBITOR COMPLEX==
-	<StructureSection load='2cjf' size='340' side='right' caption='[[2cjf]], [[Resolution\|resolution]] 1.95Å' scene=''>	+	<StructureSection load='2cjf' size='340' side='right'caption='[[2cjf]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cjf]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/"actinomyces_coelicolor"_(muller_1908)_lieske_1921 "actinomyces coelicolor" (muller 1908) lieske 1921]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CJF FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cjf]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/"actinomyces_coelicolor"_(muller_1908)_lieske_1921 "actinomyces coelicolor" (muller 1908) lieske 1921]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CJF FirstGlance]. <br>
Line 27:		Line 27:
	</StructureSection>		</StructureSection>
	[[Category: 3-dehydroquinate dehydratase]]		[[Category: 3-dehydroquinate dehydratase]]
		+	[[Category: Large Structures]]
	[[Category: Abell, A D]]		[[Category: Abell, A D]]
	[[Category: Abell, C]]		[[Category: Abell, C]]

OCA at 08:20, 23 May 2018

2018-05-23T08:20:05Z

←Older revision		Revision as of 08:20, 23 May 2018
Line 1:		Line 1:
		+
	==TYPE II DEHYDROQUINASE INHIBITOR COMPLEX==		==TYPE II DEHYDROQUINASE INHIBITOR COMPLEX==
	<StructureSection load='2cjf' size='340' side='right' caption='[[2cjf]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='2cjf' size='340' side='right' caption='[[2cjf]], [[Resolution\|resolution]] 1.95Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1d0i\|1d0i]], [[1gtz\|1gtz]], [[1gu0\|1gu0]], [[1gu1\|1gu1]], [[1v1j\|1v1j]], [[2bt4\|2bt4]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1d0i\|1d0i]], [[1gtz\|1gtz]], [[1gu0\|1gu0]], [[1gu1\|1gu1]], [[1v1j\|1v1j]], [[2bt4\|2bt4]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cjf OCA], [http://pdbe.org/2cjf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cjf RCSB], [http://www.ebi.ac.uk/pdbsum/2cjf PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cjf OCA], [http://pdbe.org/2cjf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cjf RCSB], [http://www.ebi.ac.uk/pdbsum/2cjf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2cjf ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 14:		Line 15:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cj/2cjf_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cj/2cjf_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cjf ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 16:48, 11 September 2015

2015-09-11T16:48:43Z

←Older revision		Revision as of 16:48, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2cjf' size='340' side='right' caption='[[2cjf]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='2cjf' size='340' side='right' caption='[[2cjf]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2cjf]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Streptomyces_coelicolor Streptomyces~~ coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CJF FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2cjf]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/"actinomyces_coelicolor"_(muller_1908)_lieske_1921 "actinomyces coelicolor" (muller 1908) lieske 1921]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CJF FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RP4:(1S,4S,5S)-1,4,5-TRIHYDROXY-3-[3-(PHENYLTHIO)PHENYL]CYCLOHEX-2-ENE-1-CARBOXYLIC+ACID'>RP4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RP4:(1S,4S,5S)-1,4,5-TRIHYDROXY-3-[3-(PHENYLTHIO)PHENYL]CYCLOHEX-2-ENE-1-CARBOXYLIC+ACID'>RP4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1d0i\|1d0i]], [[1gtz\|1gtz]], [[1gu0\|1gu0]], [[1gu1\|1gu1]], [[1v1j\|1v1j]], [[2bt4\|2bt4]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1d0i\|1d0i]], [[1gtz\|1gtz]], [[1gu0\|1gu0]], [[1gu1\|1gu1]], [[1v1j\|1v1j]], [[2bt4\|2bt4]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cjf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cjf RCSB], [http://www.ebi.ac.uk/pdbsum/2cjf PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cjf OCA], [http://pdbe.org/2cjf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cjf RCSB], [http://www.ebi.ac.uk/pdbsum/2cjf PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 26:		Line 26:
	</StructureSection>		</StructureSection>
	[[Category: 3-dehydroquinate dehydratase]]		[[Category: 3-dehydroquinate dehydratase]]
-	[[Category: Streptomyces coelicolor]]
	[[Category: Abell, A D]]		[[Category: Abell, A D]]
	[[Category: Abell, C]]		[[Category: Abell, C]]

OCA at 19:13, 25 December 2014

2014-12-25T19:13:27Z

←Older revision		Revision as of 19:13, 25 December 2014
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cjf]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CJF FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cjf]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CJF FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RP4:(1S,4S,5S)-1,4,5-TRIHYDROXY-3-[3-(PHENYLTHIO)PHENYL]CYCLOHEX-2-ENE-1-CARBOXYLIC+ACID'>RP4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RP4:(1S,4S,5S)-1,4,5-TRIHYDROXY-3-[3-(PHENYLTHIO)PHENYL]CYCLOHEX-2-ENE-1-CARBOXYLIC+ACID'>RP4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1d0i\|1d0i]], [[1gtz\|1gtz]], [[1gu0\|1gu0]], [[1gu1\|1gu1]], [[1v1j\|1v1j]], [[2bt4\|2bt4]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1d0i\|1d0i]], [[1gtz\|1gtz]], [[1gu0\|1gu0]], [[1gu1\|1gu1]], [[1v1j\|1v1j]], [[2bt4\|2bt4]]</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cjf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cjf RCSB], [http://www.ebi.ac.uk/pdbsum/2cjf PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cjf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cjf RCSB], [http://www.ebi.ac.uk/pdbsum/2cjf PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/AROQ_STRCO AROQ_STRCO]] Catalyzes a trans-dehydration via an enolate intermediate (By similarity).[HAMAP-Rule:MF_00169]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	[[Category: 3-dehydroquinate dehydratase]]		[[Category: 3-dehydroquinate dehydratase]]
	[[Category: Streptomyces coelicolor]]		[[Category: Streptomyces coelicolor]]
-	[[Category: Abell, A D.]]	+	[[Category: Abell, A D]]
-	[[Category: Abell, C.]]	+	[[Category: Abell, C]]
-	[[Category: Lapthorn, A J.]]	+	[[Category: Lapthorn, A J]]
-	[[Category: Payne, R J.]]	+	[[Category: Payne, R J]]
-	[[Category: Riboldi-Tunnicliffe, A.]]	+	[[Category: Riboldi-Tunnicliffe, A]]
	[[Category: Amino-acid biosynthesis]]		[[Category: Amino-acid biosynthesis]]
	[[Category: Aromatic amino acid biosynthesis]]		[[Category: Aromatic amino acid biosynthesis]]

OCA at 00:09, 30 September 2014

2014-09-30T00:09:27Z

←Older revision		Revision as of 00:09, 30 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2cjf.~~png~~\|~~left~~\|200px]]	+	==TYPE II DEHYDROQUINASE INHIBITOR COMPLEX==
		+	<StructureSection load='2cjf' size='340' side='right' caption='[[2cjf]], [[Resolution\|resolution]] 1.95Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2cjf]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CJF FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RP4:(1S,4S,5S)-1,4,5-TRIHYDROXY-3-[3-(PHENYLTHIO)PHENYL]CYCLOHEX-2-ENE-1-CARBOXYLIC+ACID'>RP4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1d0i\|1d0i]], [[1gtz\|1gtz]], [[1gu0\|1gu0]], [[1gu1\|1gu1]], [[1v1j\|1v1j]], [[2bt4\|2bt4]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-dehydroquinate_dehydratase 3-dehydroquinate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.10 4.2.1.10] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cjf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cjf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cjf RCSB], [http://www.ebi.ac.uk/pdbsum/2cjf PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cj/2cjf_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

-	~~{{STRUCTURE_2cjf\| PDB~~=~~2cjf \| SCENE= }}~~	+	==See Also==
-		+	*[[Dehydroquinase\|Dehydroquinase]]
-	~~===TYPE II DEHYDROQUINASE INHIBITOR COMPLEX~~===	+	__TOC__
-		+	</StructureSection>
-		+
-	~~==About this Structure==~~	+
-	[[~~2cjf~~]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA].	+
-		+
-	~~==Reference==~~	+
-	<~~ref group="xtra">PMID:017487901</ref><references group="xtra"~~/>	+
	[[Category: 3-dehydroquinate dehydratase]]		[[Category: 3-dehydroquinate dehydratase]]
	[[Category: Streptomyces coelicolor]]		[[Category: Streptomyces coelicolor]]

OCA: Protected "2cjf" [edit=sysop:move=sysop]

2013-01-06T09:35:24Z

Protected "2cjf" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:35, 6 January 2013

OCA at 09:35, 6 January 2013

2013-01-06T09:35:22Z

←Older revision		Revision as of 09:35, 6 January 2013
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-	{{Seed}}
	[[Image:2cjf.png\|left\|200px]]		[[Image:2cjf.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2cjf", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2cjf\| PDB=2cjf \| SCENE= }}		{{STRUCTURE_2cjf\| PDB=2cjf \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2CJF~~ is a 12 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA].	+	[[2cjf]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~17487901~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:017487901</ref><references group="xtra"/>
	[[Category: 3-dehydroquinate dehydratase]]		[[Category: 3-dehydroquinate dehydratase]]
	[[Category: Streptomyces coelicolor]]		[[Category: Streptomyces coelicolor]]
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	[[Category: Lyase]]		[[Category: Lyase]]
	[[Category: Shikimate pathway]]		[[Category: Shikimate pathway]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 22 11:03:53 2009''

OCA at 09:03, 22 March 2009

2009-03-22T09:03:54Z

←Older revision		Revision as of 09:03, 22 March 2009
Line 15:		Line 15:
	==About this Structure==		==About this Structure==
	2CJF is a 12 chains structure of sequences from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA].		2CJF is a 12 chains structure of sequences from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CJF OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:17487901</ref><references group="xtra"/>
	[[Category: 3-dehydroquinate dehydratase]]		[[Category: 3-dehydroquinate dehydratase]]
	[[Category: Streptomyces coelicolor]]		[[Category: Streptomyces coelicolor]]
Line 30:		Line 33:
	[[Category: Shikimate pathway]]		[[Category: Shikimate pathway]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Feb 18 04~~:09:01 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 22 11:03:53 2009''