2cw7 - Revision history

OCA at 13:44, 13 March 2024

2024-03-13T13:44:05Z

←Older revision		Revision as of 13:44, 13 March 2024
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	<StructureSection load='2cw7' size='340' side='right'caption='[[2cw7]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='2cw7' size='340' side='right'caption='[[2cw7]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2cw7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Pyrococcus_kodakaraensis_(strain_kod1) Pyrococcus kodakaraensis (strain kod1)~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CW7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2cw7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_kodakarensis_KOD1 Thermococcus kodakarensis KOD1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CW7 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.7Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[2cw8\|2cw8]]~~</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cw7 OCA], [https://pdbe.org/2cw7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cw7 RCSB], [https://www.ebi.ac.uk/pdbsum/2cw7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cw7 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cw7 OCA], [https://pdbe.org/2cw7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cw7 RCSB], [https://www.ebi.ac.uk/pdbsum/2cw7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cw7 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/~~DPOL_PYRKO DPOL_PYRKO]~~] Intein encoded endonucleases are thought to mediate intein mobility by site-specific recombination initiated by endonuclease cleavage at the "homing site" in gene that lack the intein. PI-PkoI recognizes 5'-GATTTAGATCCCTGTACC-3' and PI-PkoII recognizes 5'-CAGCTACTACGGTTAC-3'.	+	[https://www.uniprot.org/uniprot/DPOL_THEKO DPOL_THEKO] Intein encoded endonucleases are thought to mediate intein mobility by site-specific recombination initiated by endonuclease cleavage at the "homing site" in gene that lack the intein. PI-PkoI recognizes 5'-GATTTAGATCCCTGTACC-3' and PI-PkoII recognizes 5'-CAGCTACTACGGTTAC-3'.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Fujiwara, S]]	+	[[Category: Thermococcus kodakarensis KOD1]]
-	[[Category: Hashimoto, H]]	+	[[Category: Fujiwara S]]
-	[[Category: Imanaka, T]]	+	[[Category: Hashimoto H]]
-	[[Category: Inoue, T]]	+	[[Category: Imanaka T]]
-	[[Category: Kai, Y]]	+	[[Category: Inoue T]]
-	[[Category: Matsumura, H]]	+	[[Category: Kai Y]]
-	[[Category: Nishioka, M]]	+	[[Category: Matsumura H]]
-	[[Category: Takagi, M]]	+	[[Category: Nishioka M]]
-	[[Category: Takahashi, H]]	+	[[Category: Takagi M]]
-	~~[[Category: Hydrolase~~]]	+	[[Category: Takahashi H]]

OCA at 07:01, 1 December 2021

2021-12-01T07:01:55Z

←Older revision		Revision as of 07:01, 1 December 2021
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	<StructureSection load='2cw7' size='340' side='right'caption='[[2cw7]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='2cw7' size='340' side='right'caption='[[2cw7]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2cw7]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Pyrococcus_kodakaraensis_(strain_kod1) Pyrococcus kodakaraensis (strain kod1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2CW7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2cw7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_kodakaraensis_(strain_kod1) Pyrococcus kodakaraensis (strain kod1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CW7 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2cw8\|2cw8]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2cw8\|2cw8]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2cw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cw7 OCA], [~~http~~://pdbe.org/2cw7 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2cw7 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2cw7 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2cw7 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cw7 OCA], [https://pdbe.org/2cw7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cw7 RCSB], [https://www.ebi.ac.uk/pdbsum/2cw7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cw7 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/DPOL_PYRKO DPOL_PYRKO]] Intein encoded endonucleases are thought to mediate intein mobility by site-specific recombination initiated by endonuclease cleavage at the "homing site" in gene that lack the intein. PI-PkoI recognizes 5'-GATTTAGATCCCTGTACC-3' and PI-PkoII recognizes 5'-CAGCTACTACGGTTAC-3'.	+	[[https://www.uniprot.org/uniprot/DPOL_PYRKO DPOL_PYRKO]] Intein encoded endonucleases are thought to mediate intein mobility by site-specific recombination initiated by endonuclease cleavage at the "homing site" in gene that lack the intein. PI-PkoI recognizes 5'-GATTTAGATCCCTGTACC-3' and PI-PkoII recognizes 5'-CAGCTACTACGGTTAC-3'.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 11:06, 26 February 2020

2020-02-26T11:06:09Z

←Older revision		Revision as of 11:06, 26 February 2020
Line 1:		Line 1:

	==Crystal structure of intein homing endonuclease II==		==Crystal structure of intein homing endonuclease II==
-	<StructureSection load='2cw7' size='340' side='right' caption='[[2cw7]], [[Resolution\|resolution]] 2.70Å' scene=''>	+	<StructureSection load='2cw7' size='340' side='right'caption='[[2cw7]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cw7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_kodakaraensis_(strain_kod1) Pyrococcus kodakaraensis (strain kod1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CW7 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cw7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_kodakaraensis_(strain_kod1) Pyrococcus kodakaraensis (strain kod1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CW7 FirstGlance]. <br>
Line 22:		Line 22:

	==See Also==		==See Also==
-	*[[Endonuclease\|Endonuclease]]	+	*[[Endonuclease 3D structures\|Endonuclease 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Fujiwara, S]]		[[Category: Fujiwara, S]]
	[[Category: Hashimoto, H]]		[[Category: Hashimoto, H]]

OCA at 08:34, 23 May 2018

2018-05-23T08:34:23Z

←Older revision		Revision as of 08:34, 23 May 2018
Line 1:		Line 1:
		+
	==Crystal structure of intein homing endonuclease II==		==Crystal structure of intein homing endonuclease II==
	<StructureSection load='2cw7' size='340' side='right' caption='[[2cw7]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='2cw7' size='340' side='right' caption='[[2cw7]], [[Resolution\|resolution]] 2.70Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2cw8\|2cw8]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2cw8\|2cw8]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cw7 OCA], [http://pdbe.org/2cw7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cw7 RCSB], [http://www.ebi.ac.uk/pdbsum/2cw7 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cw7 OCA], [http://pdbe.org/2cw7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cw7 RCSB], [http://www.ebi.ac.uk/pdbsum/2cw7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2cw7 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cw/2cw7_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cw/2cw7_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 18:52, 8 February 2016

2016-02-08T18:52:17Z

←Older revision		Revision as of 18:52, 8 February 2016
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cw7 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 14:25, 10 September 2015

2015-09-10T14:25:46Z

←Older revision		Revision as of 14:25, 10 September 2015
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	<StructureSection load='2cw7' size='340' side='right' caption='[[2cw7]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='2cw7' size='340' side='right' caption='[[2cw7]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2cw7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Thermococcus_kodakarensis_kod1 Thermococcus kodakarensis~~ kod1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CW7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2cw7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_kodakaraensis_(strain_kod1) Pyrococcus kodakaraensis (strain kod1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CW7 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2cw8\|2cw8]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2cw8\|2cw8]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cw7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cw7 RCSB], [http://www.ebi.ac.uk/pdbsum/2cw7 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cw7 OCA], [http://pdbe.org/2cw7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cw7 RCSB], [http://www.ebi.ac.uk/pdbsum/2cw7 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 24:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Thermococcus kodakarensis kod1]]
	[[Category: Fujiwara, S]]		[[Category: Fujiwara, S]]
	[[Category: Hashimoto, H]]		[[Category: Hashimoto, H]]

OCA at 01:26, 25 December 2014

2014-12-25T01:26:32Z

←Older revision		Revision as of 01:26, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cw7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermococcus_kodakarensis_kod1 Thermococcus kodakarensis kod1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CW7 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cw7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermococcus_kodakarensis_kod1 Thermococcus kodakarensis kod1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CW7 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2cw8\|2cw8]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2cw8\|2cw8]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cw7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cw7 RCSB], [http://www.ebi.ac.uk/pdbsum/2cw7 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cw7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cw7 RCSB], [http://www.ebi.ac.uk/pdbsum/2cw7 PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/DPOL_PYRKO DPOL_PYRKO]] Intein encoded endonucleases are thought to mediate intein mobility by site-specific recombination initiated by endonuclease cleavage at the "homing site" in gene that lack the intein. PI-PkoI recognizes 5'-GATTTAGATCCCTGTACC-3' and PI-PkoII recognizes 5'-CAGCTACTACGGTTAC-3'.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 25:
	</StructureSection>		</StructureSection>
	[[Category: Thermococcus kodakarensis kod1]]		[[Category: Thermococcus kodakarensis kod1]]
-	[[Category: Fujiwara, S.]]	+	[[Category: Fujiwara, S]]
-	[[Category: Hashimoto, H.]]	+	[[Category: Hashimoto, H]]
-	[[Category: Imanaka, T.]]	+	[[Category: Imanaka, T]]
-	[[Category: Inoue, T.]]	+	[[Category: Inoue, T]]
-	[[Category: Kai, Y.]]	+	[[Category: Kai, Y]]
-	[[Category: Matsumura, H.]]	+	[[Category: Matsumura, H]]
-	[[Category: Nishioka, M.]]	+	[[Category: Nishioka, M]]
-	[[Category: Takagi, M.]]	+	[[Category: Takagi, M]]
-	[[Category: Takahashi, H.]]	+	[[Category: Takahashi, H]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 05:17, 29 September 2014

2014-09-29T05:17:51Z

←Older revision		Revision as of 05:17, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:2cw7.png\|left\|200px]]~~	+	==Crystal structure of intein homing endonuclease II==
-		+	<StructureSection load='2cw7' size='340' side='right' caption='[[2cw7]], [[Resolution\|resolution]] 2.70Å' scene=''>
-	~~{{STRUCTURE_2cw7\| PDB=2cw7 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2cw7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermococcus_kodakarensis_kod1 Thermococcus kodakarensis kod1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CW7 FirstGlance]. <br>
-	===Crystal structure of intein homing endonuclease II===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2cw8\|2cw8]]</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cw7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cw7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cw7 RCSB], [http://www.ebi.ac.uk/pdbsum/2cw7 PDBsum]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[2cw7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermococcus_kodakarensis_kod1 Thermococcus kodakarensis kod1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cw/2cw7_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

	==See Also==		==See Also==
	*[[Endonuclease\|Endonuclease]]		*[[Endonuclease\|Endonuclease]]
-		+	__TOC__
-	~~==Reference==~~	+	</StructureSection>
-	~~<ref group="xtra">PMID:016493661</ref>~~<~~references group="xtra"~~/>	+
	[[Category: Thermococcus kodakarensis kod1]]		[[Category: Thermococcus kodakarensis kod1]]
	[[Category: Fujiwara, S.]]		[[Category: Fujiwara, S.]]

OCA at 11:07, 20 October 2012

2012-10-20T11:07:52Z

←Older revision		Revision as of 11:07, 20 October 2012
Line 7:		Line 7:

	==About this Structure==		==About this Structure==
-	[[2cw7]] is a 1 chain structure ~~of [[Endonuclease]]~~ with sequence from [http://en.wikipedia.org/wiki/~~Thermococcus_kodakarensis~~ Thermococcus kodakarensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA].	+	[[2cw7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermococcus_kodakarensis_kod1 Thermococcus kodakarensis kod1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CW7 OCA].

	==See Also==		==See Also==
Line 14:		Line 14:
	==Reference==		==Reference==
	<ref group="xtra">PMID:016493661</ref><references group="xtra"/>		<ref group="xtra">PMID:016493661</ref><references group="xtra"/>
-	[[Category: Thermococcus kodakarensis]]	+	[[Category: Thermococcus kodakarensis kod1]]
	[[Category: Fujiwara, S.]]		[[Category: Fujiwara, S.]]
	[[Category: Hashimoto, H.]]		[[Category: Hashimoto, H.]]

OCA: Protected "2cw7" [edit=sysop:move=sysop]

2012-07-26T04:20:11Z

Protected "2cw7" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:20, 26 July 2012