2cz8 - Revision history

OCA at 08:21, 25 October 2023

2023-10-25T08:21:18Z

←Older revision		Revision as of 08:21, 25 October 2023
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	<StructureSection load='2cz8' size='340' side='right'caption='[[2cz8]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='2cz8' size='340' side='right'caption='[[2cz8]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Thet8 Thet8~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.5Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz8 OCA], [https://pdbe.org/2cz8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cz8 RCSB], [https://www.ebi.ac.uk/pdbsum/2cz8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cz8 ProSAT], [https://www.topsan.org/Proteins/RSGI/2cz8 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz8 OCA], [https://pdbe.org/2cz8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cz8 RCSB], [https://www.ebi.ac.uk/pdbsum/2cz8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cz8 ProSAT], [https://www.topsan.org/Proteins/RSGI/2cz8 TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/DODEC_THET8 DODEC_THET8] May function as storage protein that sequesters various flavins and other cofactors, thereby protecting the cell against undesirable reactions mediated by the free cofactors. Binds and sequesters FMN, FAD, lumiflavin and lumichrome, and can also bind coenzyme A.<ref>PMID:17855371</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cz8 ConSurf].		</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cz8 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Thet8~~]]	+	[[Category: Thermus thermophilus HB8]]
-	[[Category: Inagaki, E]]	+	[[Category: Inagaki E]]
-	[[Category: Kumei, M]]	+	[[Category: Kumei M]]
-	[[Category: Nakano, N]]	+	[[Category: Nakano N]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Shinkai A]]
-	[[Category: Shinkai, A]]	+	[[Category: Yokoyama S]]
-	[[Category: Yokoyama, S]]	+
-	~~[[Category: Dodecamer]]~~	+
-	~~[[Category: Flavin]]~~	+
-	~~[[Category: Flavin-adenine dinucleotide]]~~	+
-	~~[[Category: National project on protein structural and functional analyse]]~~	+
-	~~[[Category: Nppsfa]]~~	+
-	~~[[Category: Rsgi]]~~	+
-	~~[[Category: Unknown function~~]]	+

OCA at 10:24, 8 December 2021

2021-12-08T10:24:19Z

←Older revision		Revision as of 10:24, 8 December 2021
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	<StructureSection load='2cz8' size='340' side='right'caption='[[2cz8]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='2cz8' size='340' side='right'caption='[[2cz8]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz8 OCA], [~~http~~://pdbe.org/2cz8 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2cz8 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2cz8 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2cz8 ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/2cz8 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz8 OCA], [https://pdbe.org/2cz8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cz8 RCSB], [https://www.ebi.ac.uk/pdbsum/2cz8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cz8 ProSAT], [https://www.topsan.org/Proteins/RSGI/2cz8 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 07:48, 4 March 2020

2020-03-04T07:48:23Z

←Older revision		Revision as of 07:48, 4 March 2020
Line 1:		Line 1:

	==Crystal Structure of tt0972 protein from Thermus thermophilus==		==Crystal Structure of tt0972 protein from Thermus thermophilus==
-	<StructureSection load='2cz8' size='340' side='right' caption='[[2cz8]], [[Resolution\|resolution]] 1.50Å' scene=''>	+	<StructureSection load='2cz8' size='340' side='right'caption='[[2cz8]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Thet8]]		[[Category: Thet8]]
	[[Category: Inagaki, E]]		[[Category: Inagaki, E]]

OCA at 06:36, 30 May 2018

2018-05-30T06:36:20Z

←Older revision		Revision as of 06:36, 30 May 2018
Line 1:		Line 1:
		+
	==Crystal Structure of tt0972 protein from Thermus thermophilus==		==Crystal Structure of tt0972 protein from Thermus thermophilus==
	<StructureSection load='2cz8' size='340' side='right' caption='[[2cz8]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='2cz8' size='340' side='right' caption='[[2cz8]], [[Resolution\|resolution]] 1.50Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz8 OCA], [http://pdbe.org/2cz8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cz8 RCSB], [http://www.ebi.ac.uk/pdbsum/2cz8 PDBsum], [http://www.topsan.org/Proteins/RSGI/2cz8 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz8 OCA], [http://pdbe.org/2cz8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cz8 RCSB], [http://www.ebi.ac.uk/pdbsum/2cz8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2cz8 ProSAT], [http://www.topsan.org/Proteins/RSGI/2cz8 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 10:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/2cz8_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/2cz8_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 09:51, 9 February 2016

2016-02-09T09:51:40Z

←Older revision		Revision as of 09:51, 9 February 2016
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cz8 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 21:03, 10 September 2015

2015-09-10T21:03:28Z

←Older revision		Revision as of 21:03, 10 September 2015
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	<StructureSection load='2cz8' size='340' side='right' caption='[[2cz8]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='2cz8' size='340' side='right' caption='[[2cz8]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Thermus_thermophilus Thermus thermophilus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cz8 RCSB], [http://www.ebi.ac.uk/pdbsum/2cz8 PDBsum], [http://www.topsan.org/Proteins/RSGI/2cz8 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz8 OCA], [http://pdbe.org/2cz8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cz8 RCSB], [http://www.ebi.ac.uk/pdbsum/2cz8 PDBsum], [http://www.topsan.org/Proteins/RSGI/2cz8 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 18:		Line 18:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Thermus thermophilus~~]]	+	[[Category: Thet8]]
	[[Category: Inagaki, E]]		[[Category: Inagaki, E]]
	[[Category: Kumei, M]]		[[Category: Kumei, M]]

OCA at 06:05, 25 December 2014

2014-12-25T06:05:06Z

←Older revision		Revision as of 06:05, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cz8 RCSB], [http://www.ebi.ac.uk/pdbsum/2cz8 PDBsum], [http://www.topsan.org/Proteins/RSGI/2cz8 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cz8 RCSB], [http://www.ebi.ac.uk/pdbsum/2cz8 PDBsum], [http://www.topsan.org/Proteins/RSGI/2cz8 TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
-	[[Category: Inagaki, E.]]	+	[[Category: Inagaki, E]]
-	[[Category: Kumei, M.]]	+	[[Category: Kumei, M]]
-	[[Category: Nakano, N.]]	+	[[Category: Nakano, N]]
-	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Shinkai, A.]]	+	[[Category: Shinkai, A]]
-	[[Category: Yokoyama, S.]]	+	[[Category: Yokoyama, S]]
	[[Category: Dodecamer]]		[[Category: Dodecamer]]
	[[Category: Flavin]]		[[Category: Flavin]]
Line 30:		Line 30:
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
-	[[Category: Riken structural genomics/proteomics initiative]]
	[[Category: Rsgi]]		[[Category: Rsgi]]
-	[[Category: Structural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 01:58, 30 September 2014

2014-09-30T01:58:25Z

←Older revision		Revision as of 01:58, 30 September 2014
Line 1:		Line 1:
-	~~[[Image:2cz8.png\|left\|200px]]~~	+	==Crystal Structure of tt0972 protein from Thermus thermophilus==
-		+	<StructureSection load='2cz8' size='340' side='right' caption='[[2cz8]], [[Resolution\|resolution]] 1.50Å' scene=''>
-	~~{{STRUCTURE_2cz8\| PDB=2cz8 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2cz8]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CZ8 FirstGlance]. <br>
-	===Crystal Structure of tt0972 protein from Thermus thermophilus===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene><br>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cz8 RCSB], [http://www.ebi.ac.uk/pdbsum/2cz8 PDBsum], [http://www.topsan.org/Proteins/RSGI/2cz8 TOPSAN]</span></td></tr>
-		+	<table>
-	==~~About this Structure~~==	+	== Evolutionary Conservation ==
-	[[2cz8]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA].	+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/2cz8_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
	[[Category: Inagaki, E.]]		[[Category: Inagaki, E.]]

OCA: Protected "2cz8" [edit=sysop:move=sysop]

2013-01-06T11:11:57Z

Protected "2cz8" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:11, 6 January 2013

OCA at 11:11, 6 January 2013

2013-01-06T11:11:54Z

←Older revision		Revision as of 11:11, 6 January 2013
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-	{{Seed}}
	[[Image:2cz8.png\|left\|200px]]		[[Image:2cz8.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_2cz8\| PDB=2cz8 \| SCENE= }}		{{STRUCTURE_2cz8\| PDB=2cz8 \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2CZ8~~ is a 8 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA].	+	[[2cz8]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ8 OCA].
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
	[[Category: Inagaki, E.]]		[[Category: Inagaki, E.]]
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	[[Category: Rsgi]]		[[Category: Rsgi]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-		+	[[Category: Unknown function]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Sun Nov 16 17:30:03 2008''~~	+