2dk4 - Revision history

OCA at 06:39, 1 May 2024

2024-05-01T06:39:37Z

←Older revision		Revision as of 06:39, 1 May 2024
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	==Solution structure of Splicing Factor Motif in Pre-mRNA splicing factor 18 (hPRP18)==		==Solution structure of Splicing Factor Motif in Pre-mRNA splicing factor 18 (hPRP18)==
-	<StructureSection load='2dk4' size='340' side='right'caption='[[2dk4~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='2dk4' size='340' side='right'caption='[[2dk4]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Human Human~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>PRPF18, HPRP18 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~9606 HUMAN])~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dk4 OCA], [https://pdbe.org/2dk4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dk4 RCSB], [https://www.ebi.ac.uk/pdbsum/2dk4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dk4 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dk4 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dk4 OCA], [https://pdbe.org/2dk4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dk4 RCSB], [https://www.ebi.ac.uk/pdbsum/2dk4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dk4 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dk4 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/PRP18_HUMAN PRP18_HUMAN]] Participates in the second step of pre-mRNA splicing.<ref>PMID:9000057</ref>	+	[https://www.uniprot.org/uniprot/PRP18_HUMAN PRP18_HUMAN] Participates in the second step of pre-mRNA splicing.<ref>PMID:9000057</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 26:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Human~~]]	+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: He, F]]	+	[[Category: He F]]
-	[[Category: Inoue, M]]	+	[[Category: Inoue M]]
-	[[Category: Kigawa, T]]	+	[[Category: Kigawa T]]
-	[[Category: Muto, Y]]	+	[[Category: Muto Y]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Shirouzu M]]
-	[[Category: Shirouzu, M]]	+	[[Category: Terada T]]
-	[[Category: Terada, T]]	+	[[Category: Yokoyama S]]
-	[[Category: Yokoyama, S]]	+
-	~~[[Category: Gene regulation]]~~	+
-	~~[[Category: Hprp18]]~~	+
-	~~[[Category: National project on protein structural and functional analyse]]~~	+
-	~~[[Category: Nppsfa]]~~	+
-	~~[[Category: Pre-mrna splicing factor 18]]~~	+
-	~~[[Category: Rsgi]]~~	+
-	~~[[Category: Sfm domain~~]]	+

OCA at 20:38, 20 October 2021

2021-10-20T20:38:03Z

←Older revision		Revision as of 20:38, 20 October 2021
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	<StructureSection load='2dk4' size='340' side='right'caption='[[2dk4]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2dk4' size='340' side='right'caption='[[2dk4]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PRPF18, HPRP18 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PRPF18, HPRP18 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2dk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dk4 OCA], [~~http~~://pdbe.org/2dk4 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2dk4 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2dk4 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2dk4 ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/2dk4 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dk4 OCA], [https://pdbe.org/2dk4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dk4 RCSB], [https://www.ebi.ac.uk/pdbsum/2dk4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dk4 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dk4 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/PRP18_HUMAN PRP18_HUMAN]] Participates in the second step of pre-mRNA splicing.<ref>PMID:9000057</ref>	+	[[https://www.uniprot.org/uniprot/PRP18_HUMAN PRP18_HUMAN]] Participates in the second step of pre-mRNA splicing.<ref>PMID:9000057</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 09:40, 25 December 2019

2019-12-25T09:40:22Z

←Older revision		Revision as of 09:40, 25 December 2019
Line 1:		Line 1:

	==Solution structure of Splicing Factor Motif in Pre-mRNA splicing factor 18 (hPRP18)==		==Solution structure of Splicing Factor Motif in Pre-mRNA splicing factor 18 (hPRP18)==
-	<StructureSection load='2dk4' size='340' side='right' caption='[[2dk4]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='2dk4' size='340' side='right'caption='[[2dk4]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>
Line 21:		Line 21:

	==See Also==		==See Also==
-	*[[Pre-mRNA-splicing ~~factor~~\|Pre-mRNA-splicing ~~factor~~]]	+	*[[Pre-mRNA splicing factors 3D structures\|Pre-mRNA splicing factors 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 27:		Line 27:
	</StructureSection>		</StructureSection>
	[[Category: Human]]		[[Category: Human]]
		+	[[Category: Large Structures]]
	[[Category: He, F]]		[[Category: He, F]]
	[[Category: Inoue, M]]		[[Category: Inoue, M]]

OCA at 06:34, 30 May 2018

2018-05-30T06:34:28Z

←Older revision		Revision as of 06:34, 30 May 2018
Line 1:		Line 1:
		+
	==Solution structure of Splicing Factor Motif in Pre-mRNA splicing factor 18 (hPRP18)==		==Solution structure of Splicing Factor Motif in Pre-mRNA splicing factor 18 (hPRP18)==
	<StructureSection load='2dk4' size='340' side='right' caption='[[2dk4]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2dk4' size='340' side='right' caption='[[2dk4]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PRPF18, HPRP18 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PRPF18, HPRP18 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dk4 OCA], [http://pdbe.org/2dk4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dk4 RCSB], [http://www.ebi.ac.uk/pdbsum/2dk4 PDBsum], [http://www.topsan.org/Proteins/RSGI/2dk4 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dk4 OCA], [http://pdbe.org/2dk4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dk4 RCSB], [http://www.ebi.ac.uk/pdbsum/2dk4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2dk4 ProSAT], [http://www.topsan.org/Proteins/RSGI/2dk4 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dk/2dk4_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dk/2dk4_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 13:32, 9 February 2016

2016-02-09T13:32:24Z

←Older revision		Revision as of 13:32, 9 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dk4 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

OCA at 22:42, 10 September 2015

2015-09-10T22:42:49Z

←Older revision		Revision as of 22:42, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2dk4' size='340' side='right' caption='[[2dk4]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2dk4' size='340' side='right' caption='[[2dk4]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Homo_sapiens Homo sapiens~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PRPF18, HPRP18 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 ~~Homo sapiens~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PRPF18, HPRP18 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dk4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2dk4 RCSB], [http://www.ebi.ac.uk/pdbsum/2dk4 PDBsum], [http://www.topsan.org/Proteins/RSGI/2dk4 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dk4 OCA], [http://pdbe.org/2dk4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dk4 RCSB], [http://www.ebi.ac.uk/pdbsum/2dk4 PDBsum], [http://www.topsan.org/Proteins/RSGI/2dk4 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 25:		Line 25:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Homo sapiens~~]]	+	[[Category: Human]]
	[[Category: He, F]]		[[Category: He, F]]
	[[Category: Inoue, M]]		[[Category: Inoue, M]]

OCA at 07:06, 25 December 2014

2014-12-25T07:06:49Z

←Older revision		Revision as of 07:06, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PRPF18, HPRP18 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PRPF18, HPRP18 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dk4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2dk4 RCSB], [http://www.ebi.ac.uk/pdbsum/2dk4 PDBsum], [http://www.topsan.org/Proteins/RSGI/2dk4 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dk4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2dk4 RCSB], [http://www.ebi.ac.uk/pdbsum/2dk4 PDBsum], [http://www.topsan.org/Proteins/RSGI/2dk4 TOPSAN]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/PRP18_HUMAN PRP18_HUMAN]] Participates in the second step of pre-mRNA splicing.<ref>PMID:9000057</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	==See Also==		==See Also==
	*[[Pre-mRNA-splicing factor\|Pre-mRNA-splicing factor]]		*[[Pre-mRNA-splicing factor\|Pre-mRNA-splicing factor]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
-	[[Category: He, F.]]	+	[[Category: He, F]]
-	[[Category: Inoue, M.]]	+	[[Category: Inoue, M]]
-	[[Category: Kigawa, T.]]	+	[[Category: Kigawa, T]]
-	[[Category: Muto, Y.]]	+	[[Category: Muto, Y]]
-	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Shirouzu, M.]]	+	[[Category: Shirouzu, M]]
-	[[Category: Terada, T.]]	+	[[Category: Terada, T]]
-	[[Category: Yokoyama, S.]]	+	[[Category: Yokoyama, S]]
	[[Category: Gene regulation]]		[[Category: Gene regulation]]
	[[Category: Hprp18]]		[[Category: Hprp18]]
Line 35:		Line 39:
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
	[[Category: Pre-mrna splicing factor 18]]		[[Category: Pre-mrna splicing factor 18]]
-	[[Category: Riken structural genomics/proteomics initiative]]
	[[Category: Rsgi]]		[[Category: Rsgi]]
	[[Category: Sfm domain]]		[[Category: Sfm domain]]
-	[[Category: Structural genomic]]

OCA at 02:27, 29 September 2014

2014-09-29T02:27:23Z

←Older revision		Revision as of 02:27, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:2dk4.png\|left\|200px]]~~	+	==Solution structure of Splicing Factor Motif in Pre-mRNA splicing factor 18 (hPRP18)==
-		+	<StructureSection load='2dk4' size='340' side='right' caption='[[2dk4]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
-	~~{{STRUCTURE_2dk4\| PDB=2dk4 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2dk4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DK4 FirstGlance]. <br>
-	===Solution structure of Splicing Factor Motif in Pre-mRNA splicing factor 18 (hPRP18)===	+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PRPF18, HPRP18 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dk4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2dk4 RCSB], [http://www.ebi.ac.uk/pdbsum/2dk4 PDBsum], [http://www.topsan.org/Proteins/RSGI/2dk4 TOPSAN]</span></td></tr>
-		+	<table>
-	==~~About this Structure~~==	+	== Evolutionary Conservation ==
-	[[2dk4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA].	+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dk/2dk4_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

	==See Also==		==See Also==
	*[[Pre-mRNA-splicing factor\|Pre-mRNA-splicing factor]]		*[[Pre-mRNA-splicing factor\|Pre-mRNA-splicing factor]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: He, F.]]		[[Category: He, F.]]

OCA at 13:59, 20 October 2012

2012-10-20T13:59:54Z

←Older revision		Revision as of 13:59, 20 October 2012
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	==About this Structure==		==About this Structure==
-	[[2dk4]] is a 1 chain structure ~~of [[Pre-mRNA-splicing factor]]~~ with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA].	+	[[2dk4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DK4 OCA].

	==See Also==		==See Also==

OCA at 13:44, 26 July 2012

2012-07-26T13:44:34Z

←Older revision		Revision as of 13:44, 26 July 2012
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	[[Image:2dk4.png\|left\|200px]]		[[Image:2dk4.png\|left\|200px]]

-	<!--
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-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_2dk4\| PDB=2dk4 \| SCENE= }}		{{STRUCTURE_2dk4\| PDB=2dk4 \| SCENE= }}

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	==See Also==		==See Also==
-	*[[Pre-mRNA-splicing factor]]	+	*[[Pre-mRNA-splicing factor\|Pre-mRNA-splicing factor]]
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
	[[Category: He, F.]]		[[Category: He, F.]]