2eez - Revision history

OCA at 08:39, 25 October 2023

2023-10-25T08:39:04Z

←Older revision		Revision as of 08:39, 25 October 2023
Line 3:		Line 3:
	<StructureSection load='2eez' size='340' side='right'caption='[[2eez]], [[Resolution\|resolution]] 2.71Å' scene=''>		<StructureSection load='2eez' size='340' side='right'caption='[[2eez]], [[Resolution\|resolution]] 2.71Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2eez]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Thet8 Thet8~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EEZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2eez]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EEZ FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>ttha0216 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id~~=300852 THET8])</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.71Å</td></tr>
-	~~<tr id='activity'><td class~~="~~sblockLbl~~">~~<b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>~~[~~https://en.wikipedia.org/wiki/Alanine_dehydrogenase Alanine dehydrogenase~~]~~, with EC number [https://www~~.~~brenda-enzymes.info/php/result_flat.php4?ecno=1.4.1.1 1.4.1.1] </span>~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [https://pdbe.org/2eez PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [https://www.ebi.ac.uk/pdbsum/2eez PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eez ProSAT], [https://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [https://pdbe.org/2eez PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [https://www.ebi.ac.uk/pdbsum/2eez PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eez ProSAT], [https://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q5SLS7_THET8 Q5SLS7_THET8]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Alanine dehydrogenase]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Thet8~~]]	+	[[Category: Thermus thermophilus HB8]]
-	[[Category: Karthe, P]]	+	[[Category: Karthe P]]
-	[[Category: Kumarevel~~, T S~~]]	+	[[Category: Kumarevel TS]]
-	[[Category: Kuramitsu, S]]	+	[[Category: Kuramitsu S]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Yokoyama S]]
-	[[Category: Yokoyama, S]]	+
-	~~[[Category: National project on protein structural and functional analyse]]~~	+
-	~~[[Category: Nppsfa]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Rsgi]]~~	+
-	~~[[Category: Thermus]]~~	+
-	~~[[Category: Ttha0216~~]]	+

OCA at 12:04, 10 February 2021

2021-02-10T12:04:06Z

←Older revision		Revision as of 12:04, 10 February 2021
Line 1:		Line 1:

	==Crystal structure of alanine dehydrogenase from themus thermophilus==		==Crystal structure of alanine dehydrogenase from themus thermophilus==
-	<StructureSection load='2eez' size='340' side='right' caption='[[2eez]], [[Resolution\|resolution]] 2.71Å' scene=''>	+	<StructureSection load='2eez' size='340' side='right'caption='[[2eez]], [[Resolution\|resolution]] 2.71Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2eez]] is a 6 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2EEZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2eez]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EEZ FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ttha0216 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ttha0216 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Alanine_dehydrogenase Alanine dehydrogenase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.1.1 1.4.1.1] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Alanine_dehydrogenase Alanine dehydrogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.1.1 1.4.1.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [~~http~~://pdbe.org/2eez PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2eez PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2eez ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [https://pdbe.org/2eez PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [https://www.ebi.ac.uk/pdbsum/2eez PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eez ProSAT], [https://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 21:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Alanine dehydrogenase]]		[[Category: Alanine dehydrogenase]]
		+	[[Category: Large Structures]]
	[[Category: Thet8]]		[[Category: Thet8]]
	[[Category: Karthe, P]]		[[Category: Karthe, P]]

OCA at 06:57, 6 June 2018

2018-06-06T06:57:52Z

←Older revision		Revision as of 06:57, 6 June 2018
Line 1:		Line 1:
		+
	==Crystal structure of alanine dehydrogenase from themus thermophilus==		==Crystal structure of alanine dehydrogenase from themus thermophilus==
	<StructureSection load='2eez' size='340' side='right' caption='[[2eez]], [[Resolution\|resolution]] 2.71Å' scene=''>		<StructureSection load='2eez' size='340' side='right' caption='[[2eez]], [[Resolution\|resolution]] 2.71Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ttha0216 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ttha0216 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alanine_dehydrogenase Alanine dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.1.1 1.4.1.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alanine_dehydrogenase Alanine dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.1.1 1.4.1.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [http://pdbe.org/2eez PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [http://www.ebi.ac.uk/pdbsum/2eez PDBsum], [http://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [http://pdbe.org/2eez PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [http://www.ebi.ac.uk/pdbsum/2eez PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2eez ProSAT], [http://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ee/2eez_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ee/2eez_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 18:59, 7 February 2016

2016-02-07T18:59:08Z

←Older revision		Revision as of 18:59, 7 February 2016
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eez ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 04:14, 10 September 2015

2015-09-10T04:14:43Z

←Older revision		Revision as of 04:14, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2eez' size='340' side='right' caption='[[2eez]], [[Resolution\|resolution]] 2.71Å' scene=''>		<StructureSection load='2eez' size='340' side='right' caption='[[2eez]], [[Resolution\|resolution]] 2.71Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2eez]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Thermus_thermophilus_hb8 Thermus thermophilus hb8~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EEZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2eez]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EEZ FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ttha0216 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 ~~Thermus thermophilus HB8~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ttha0216 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alanine_dehydrogenase Alanine dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.1.1 1.4.1.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alanine_dehydrogenase Alanine dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.1.1 1.4.1.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [http://www.ebi.ac.uk/pdbsum/2eez PDBsum], [http://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [http://pdbe.org/2eez PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [http://www.ebi.ac.uk/pdbsum/2eez PDBsum], [http://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Alanine dehydrogenase]]		[[Category: Alanine dehydrogenase]]
-	[[Category: ~~Thermus thermophilus hb8~~]]	+	[[Category: Thet8]]
	[[Category: Karthe, P]]		[[Category: Karthe, P]]
	[[Category: Kumarevel, T S]]		[[Category: Kumarevel, T S]]

OCA at 16:47, 15 January 2015

2015-01-15T16:47:23Z

←Older revision		Revision as of 16:47, 15 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2eez]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EEZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2eez]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EEZ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ttha0216 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 Thermus thermophilus HB8])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ttha0216 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 Thermus thermophilus HB8])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alanine_dehydrogenase Alanine dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.1.1 1.4.1.1] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alanine_dehydrogenase Alanine dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.1.1 1.4.1.1] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [http://www.ebi.ac.uk/pdbsum/2eez PDBsum], [http://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [http://www.ebi.ac.uk/pdbsum/2eez PDBsum], [http://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 21:
	[[Category: Alanine dehydrogenase]]		[[Category: Alanine dehydrogenase]]
	[[Category: Thermus thermophilus hb8]]		[[Category: Thermus thermophilus hb8]]
-	[[Category: Karthe, P.]]	+	[[Category: Karthe, P]]
-	[[Category: Kumarevel, T S.]]	+	[[Category: Kumarevel, T S]]
-	[[Category: Kuramitsu, S.]]	+	[[Category: Kuramitsu, S]]
-	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Yokoyama, S~~.]]~~	+	[[Category: Yokoyama, S]]
-	~~[[Category: Alanine dehydrogenase~~]]	+
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
-	[[Category: Riken structural genomics/proteomics initiative]]
	[[Category: Rsgi]]		[[Category: Rsgi]]
-	[[Category: Structural genomic]]
	[[Category: Thermus]]		[[Category: Thermus]]
	[[Category: Ttha0216]]		[[Category: Ttha0216]]

OCA at 00:17, 30 September 2014

2014-09-30T00:17:19Z

←Older revision		Revision as of 00:17, 30 September 2014
Line 1:		Line 1:
-	~~[[Image:2eez.png\|left\|200px]]~~	+	==Crystal structure of alanine dehydrogenase from themus thermophilus==
-		+	<StructureSection load='2eez' size='340' side='right' caption='[[2eez]], [[Resolution\|resolution]] 2.71Å' scene=''>
-	~~{{STRUCTURE_2eez\| PDB=2eez \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2eez]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EEZ FirstGlance]. <br>
-	===Crystal structure of alanine dehydrogenase from themus thermophilus===	+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ttha0216 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 Thermus thermophilus HB8])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alanine_dehydrogenase Alanine dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.1.1 1.4.1.1] </span></td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eez OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2eez RCSB], [http://www.ebi.ac.uk/pdbsum/2eez PDBsum], [http://www.topsan.org/Proteins/RSGI/2eez TOPSAN]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[2eez]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ee/2eez_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Alanine dehydrogenase]]		[[Category: Alanine dehydrogenase]]
	[[Category: Thermus thermophilus hb8]]		[[Category: Thermus thermophilus hb8]]

OCA: Protected "2eez" [edit=sysop:move=sysop]

2013-01-06T09:41:36Z

Protected "2eez" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:41, 6 January 2013

OCA at 09:41, 6 January 2013

2013-01-06T09:41:34Z

←Older revision		Revision as of 09:41, 6 January 2013
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-	{{Seed}}
	[[Image:2eez.png\|left\|200px]]		[[Image:2eez.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_2eez\| PDB=2eez \| SCENE= }}		{{STRUCTURE_2eez\| PDB=2eez \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2EEZ~~ is a 6 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/~~Thermus_thermophilus~~ Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA].	+	[[2eez]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA].
	[[Category: Alanine dehydrogenase]]		[[Category: Alanine dehydrogenase]]
-	[[Category: Thermus thermophilus]]	+	[[Category: Thermus thermophilus hb8]]
	[[Category: Karthe, P.]]		[[Category: Karthe, P.]]
	[[Category: Kumarevel, T S.]]		[[Category: Kumarevel, T S.]]
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	[[Category: Thermus]]		[[Category: Thermus]]
	[[Category: Ttha0216]]		[[Category: Ttha0216]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 10:11:50 2008''

OCA at 08:11, 16 November 2008

2008-11-16T08:11:52Z

←Older revision		Revision as of 08:11, 16 November 2008
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	==About this Structure==		==About this Structure==
-	2EEZ is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA].	+	2EEZ is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EEZ OCA].
	[[Category: Alanine dehydrogenase]]		[[Category: Alanine dehydrogenase]]
-	[[Category: Single protein]]
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
	[[Category: Karthe, P.]]		[[Category: Karthe, P.]]
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	[[Category: Ttha0216]]		[[Category: Ttha0216]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~Sep 28 15~~:51:58 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 10:11:50 2008''