2g55 - Revision history

OCA at 14:40, 29 December 2021

2021-12-29T14:40:40Z

←Older revision		Revision as of 14:40, 29 December 2021
Line 3:		Line 3:
	<StructureSection load='2g55' size='340' side='right'caption='[[2g55]], [[Resolution\|resolution]] 1.82Å' scene=''>		<StructureSection load='2g55' size='340' side='right'caption='[[2g55]], [[Resolution\|resolution]] 1.82Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2g55]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G55 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2G55 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2g55]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G55 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G55 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2g4h\|2g4h]], [[2g4i\|2g4i]], [[2g4j\|2g4j]], [[2g4k\|2g4k]], [[2g4l\|2g4l]], [[2g4m\|2g4m]], [[2g4n\|2g4n]], [[2g4o\|2g4o]], [[2g4p\|2g4p]], [[2g4q\|2g4q]], [[2g4r\|2g4r]], [[2g4s\|2g4s]], [[2g4t\|2g4t]], [[2g4u\|2g4u]], [[2g4v\|2g4v]], [[2g4w\|2g4w]], [[2g4x\|2g4x]], [[2g4y\|2g4y]], [[2g4z\|2g4z]], [[2g51\|2g51]], [[2g52\|2g52]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2g4h\|2g4h]], [[2g4i\|2g4i]], [[2g4j\|2g4j]], [[2g4k\|2g4k]], [[2g4l\|2g4l]], [[2g4m\|2g4m]], [[2g4n\|2g4n]], [[2g4o\|2g4o]], [[2g4p\|2g4p]], [[2g4q\|2g4q]], [[2g4r\|2g4r]], [[2g4s\|2g4s]], [[2g4t\|2g4t]], [[2g4u\|2g4u]], [[2g4v\|2g4v]], [[2g4w\|2g4w]], [[2g4x\|2g4x]], [[2g4y\|2g4y]], [[2g4z\|2g4z]], [[2g51\|2g51]], [[2g52\|2g52]]</div></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2g55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g55 OCA], [~~http~~://pdbe.org/2g55 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2g55 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2g55 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2g55 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g55 OCA], [https://pdbe.org/2g55 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g55 RCSB], [https://www.ebi.ac.uk/pdbsum/2g55 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g55 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 11:09, 27 March 2020

2020-03-27T11:09:39Z

←Older revision		Revision as of 11:09, 27 March 2020
Line 1:		Line 1:

	==Anomalous substructure of trypsin (P3121)==		==Anomalous substructure of trypsin (P3121)==
-	<StructureSection load='2g55' size='340' side='right' caption='[[2g55]], [[Resolution\|resolution]] 1.82Å' scene=''>	+	<StructureSection load='2g55' size='340' side='right'caption='[[2g55]], [[Resolution\|resolution]] 1.82Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2g55]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G55 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2G55 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2g55]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G55 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2G55 FirstGlance]. <br>
Line 30:		Line 30:

	==See Also==		==See Also==
-	*[[Trypsin\|Trypsin]]	+	*[[Trypsin 3D structures\|Trypsin 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 36:		Line 36:
	</StructureSection>		</StructureSection>
	[[Category: Bos taurus]]		[[Category: Bos taurus]]
		+	[[Category: Large Structures]]
	[[Category: Trypsin]]		[[Category: Trypsin]]
	[[Category: Mueller-Dieckmann, C]]		[[Category: Mueller-Dieckmann, C]]
	[[Category: Weiss, M S]]		[[Category: Weiss, M S]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 06:45, 20 June 2018

2018-06-20T06:45:20Z

←Older revision		Revision as of 06:45, 20 June 2018
Line 1:		Line 1:
		+
	==Anomalous substructure of trypsin (P3121)==		==Anomalous substructure of trypsin (P3121)==
	<StructureSection load='2g55' size='340' side='right' caption='[[2g55]], [[Resolution\|resolution]] 1.82Å' scene=''>		<StructureSection load='2g55' size='340' side='right' caption='[[2g55]], [[Resolution\|resolution]] 1.82Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2g4h\|2g4h]], [[2g4i\|2g4i]], [[2g4j\|2g4j]], [[2g4k\|2g4k]], [[2g4l\|2g4l]], [[2g4m\|2g4m]], [[2g4n\|2g4n]], [[2g4o\|2g4o]], [[2g4p\|2g4p]], [[2g4q\|2g4q]], [[2g4r\|2g4r]], [[2g4s\|2g4s]], [[2g4t\|2g4t]], [[2g4u\|2g4u]], [[2g4v\|2g4v]], [[2g4w\|2g4w]], [[2g4x\|2g4x]], [[2g4y\|2g4y]], [[2g4z\|2g4z]], [[2g51\|2g51]], [[2g52\|2g52]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2g4h\|2g4h]], [[2g4i\|2g4i]], [[2g4j\|2g4j]], [[2g4k\|2g4k]], [[2g4l\|2g4l]], [[2g4m\|2g4m]], [[2g4n\|2g4n]], [[2g4o\|2g4o]], [[2g4p\|2g4p]], [[2g4q\|2g4q]], [[2g4r\|2g4r]], [[2g4s\|2g4s]], [[2g4t\|2g4t]], [[2g4u\|2g4u]], [[2g4v\|2g4v]], [[2g4w\|2g4w]], [[2g4x\|2g4x]], [[2g4y\|2g4y]], [[2g4z\|2g4z]], [[2g51\|2g51]], [[2g52\|2g52]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g55 OCA], [http://pdbe.org/2g55 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2g55 RCSB], [http://www.ebi.ac.uk/pdbsum/2g55 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g55 OCA], [http://pdbe.org/2g55 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2g55 RCSB], [http://www.ebi.ac.uk/pdbsum/2g55 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2g55 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g5/2g55_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g5/2g55_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 18:03, 7 February 2016

2016-02-07T18:03:38Z

←Older revision		Revision as of 18:03, 7 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g55 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 03:52, 10 September 2015

2015-09-10T03:52:36Z

←Older revision		Revision as of 03:52, 10 September 2015
Line 6:		Line 6:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2g4h\|2g4h]], [[2g4i\|2g4i]], [[2g4j\|2g4j]], [[2g4k\|2g4k]], [[2g4l\|2g4l]], [[2g4m\|2g4m]], [[2g4n\|2g4n]], [[2g4o\|2g4o]], [[2g4p\|2g4p]], [[2g4q\|2g4q]], [[2g4r\|2g4r]], [[2g4s\|2g4s]], [[2g4t\|2g4t]], [[2g4u\|2g4u]], [[2g4v\|2g4v]], [[2g4w\|2g4w]], [[2g4x\|2g4x]], [[2g4y\|2g4y]], [[2g4z\|2g4z]], [[2g51\|2g51]], [[2g52\|2g52]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2g4h\|2g4h]], [[2g4i\|2g4i]], [[2g4j\|2g4j]], [[2g4k\|2g4k]], [[2g4l\|2g4l]], [[2g4m\|2g4m]], [[2g4n\|2g4n]], [[2g4o\|2g4o]], [[2g4p\|2g4p]], [[2g4q\|2g4q]], [[2g4r\|2g4r]], [[2g4s\|2g4s]], [[2g4t\|2g4t]], [[2g4u\|2g4u]], [[2g4v\|2g4v]], [[2g4w\|2g4w]], [[2g4x\|2g4x]], [[2g4y\|2g4y]], [[2g4z\|2g4z]], [[2g51\|2g51]], [[2g52\|2g52]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g55 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2g55 RCSB], [http://www.ebi.ac.uk/pdbsum/2g55 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g55 OCA], [http://pdbe.org/2g55 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2g55 RCSB], [http://www.ebi.ac.uk/pdbsum/2g55 PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2g55" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 07:59, 16 January 2015

2015-01-16T07:59:25Z

←Older revision		Revision as of 07:59, 16 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2g55]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G55 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2G55 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2g55]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G55 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2G55 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2g4h\|2g4h]], [[2g4i\|2g4i]], [[2g4j\|2g4j]], [[2g4k\|2g4k]], [[2g4l\|2g4l]], [[2g4m\|2g4m]], [[2g4n\|2g4n]], [[2g4o\|2g4o]], [[2g4p\|2g4p]], [[2g4q\|2g4q]], [[2g4r\|2g4r]], [[2g4s\|2g4s]], [[2g4t\|2g4t]], [[2g4u\|2g4u]], [[2g4v\|2g4v]], [[2g4w\|2g4w]], [[2g4x\|2g4x]], [[2g4y\|2g4y]], [[2g4z\|2g4z]], [[2g51\|2g51]], [[2g52\|2g52]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2g4h\|2g4h]], [[2g4i\|2g4i]], [[2g4j\|2g4j]], [[2g4k\|2g4k]], [[2g4l\|2g4l]], [[2g4m\|2g4m]], [[2g4n\|2g4n]], [[2g4o\|2g4o]], [[2g4p\|2g4p]], [[2g4q\|2g4q]], [[2g4r\|2g4r]], [[2g4s\|2g4s]], [[2g4t\|2g4t]], [[2g4u\|2g4u]], [[2g4v\|2g4v]], [[2g4w\|2g4w]], [[2g4x\|2g4x]], [[2g4y\|2g4y]], [[2g4z\|2g4z]], [[2g51\|2g51]], [[2g52\|2g52]]</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g55 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2g55 RCSB], [http://www.ebi.ac.uk/pdbsum/2g55 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g55 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2g55 RCSB], [http://www.ebi.ac.uk/pdbsum/2g55 PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 35:		Line 35:
	[[Category: Bos taurus]]		[[Category: Bos taurus]]
	[[Category: Trypsin]]		[[Category: Trypsin]]
-	[[Category: Mueller-Dieckmann, C.]]	+	[[Category: Mueller-Dieckmann, C]]
-	[[Category: Weiss, M S.]]	+	[[Category: Weiss, M S]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 02:09, 29 September 2014

2014-09-29T02:09:40Z

←Older revision		Revision as of 02:09, 29 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2g55.~~png~~\|~~left~~\|200px]]	+	==Anomalous substructure of trypsin (P3121)==
		+	<StructureSection load='2g55' size='340' side='right' caption='[[2g55]], [[Resolution\|resolution]] 1.82Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2g55]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G55 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2G55 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2g4h\|2g4h]], [[2g4i\|2g4i]], [[2g4j\|2g4j]], [[2g4k\|2g4k]], [[2g4l\|2g4l]], [[2g4m\|2g4m]], [[2g4n\|2g4n]], [[2g4o\|2g4o]], [[2g4p\|2g4p]], [[2g4q\|2g4q]], [[2g4r\|2g4r]], [[2g4s\|2g4s]], [[2g4t\|2g4t]], [[2g4u\|2g4u]], [[2g4v\|2g4v]], [[2g4w\|2g4w]], [[2g4x\|2g4x]], [[2g4y\|2g4y]], [[2g4z\|2g4z]], [[2g51\|2g51]], [[2g52\|2g52]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2g55 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g55 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2g55 RCSB], [http://www.ebi.ac.uk/pdbsum/2g55 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g5/2g55_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	23 different crystal forms of 19 different biological macromolecules were examined with respect to their anomalously scattering substructures using diffraction data collected at a wavelength of 2.0 A (6.2 keV). In more than 90% of the cases the substructure was found to contain more than just the protein S atoms. The data presented suggest that chloride, sulfate, phosphate or metal ions from the buffer or even from the purification protocol are frequently bound to the protein molecule and that these ions are often overlooked, especially if they are not bound at full occupancy. Thus, in order to fully describe the macromolecule under study, it seems desirable that any structure determination be complemented with a long-wavelength data set.

-	~~{{STRUCTURE_2g55\| PDB=2g55 \| SCENE= }}~~	+	On the routine use of soft X-rays in macromolecular crystallography. Part IV. Efficient determination of anomalous substructures in biomacromolecules using longer X-ray wavelengths.,Mueller-Dieckmann C, Panjikar S, Schmidt A, Mueller S, Kuper J, Geerlof A, Wilmanns M, Singh RK, Tucker PA, Weiss MS Acta Crystallogr D Biol Crystallogr. 2007 Mar;63(Pt 3):366-80. Epub 2007, Feb 21. PMID:17327674<ref>PMID:17327674</ref>

-	~~===Anomalous substructure~~ of ~~trypsin (P3121)===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_17327674}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[2g55]] is a 1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Bos_taurus Bos taurus]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2G55 OCA].~~	+

	==See Also==		==See Also==
	*[[Trypsin\|Trypsin]]		*[[Trypsin\|Trypsin]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:017327674<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Bos taurus]]		[[Category: Bos taurus]]
	[[Category: Trypsin]]		[[Category: Trypsin]]

OCA at 07:27, 20 October 2012

2012-10-20T07:27:59Z

←Older revision		Revision as of 07:27, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[2g55]] is a 1 chain structure ~~of [[Trypsin]]~~ with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G55 OCA].	+	[[2g55]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G55 OCA].

	==See Also==		==See Also==

OCA: Protected "2g55" [edit=sysop:move=sysop]

2012-07-25T16:24:57Z

Protected "2g55" [edit=sysop:move=sysop]

←Older revision

Revision as of 16:24, 25 July 2012

OCA at 16:24, 25 July 2012

2012-07-25T16:24:55Z

←Older revision		Revision as of 16:24, 25 July 2012
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-	{{Seed}}
	[[Image:2g55.png\|left\|200px]]		[[Image:2g55.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_2g55\| PDB=2g55 \| SCENE= }}		{{STRUCTURE_2g55\| PDB=2g55 \| SCENE= }}

	===Anomalous substructure of trypsin (P3121)===		===Anomalous substructure of trypsin (P3121)===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_17327674}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 17327674 is the PubMed ID number.
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	{{ABSTRACT_PUBMED_17327674}}		{{ABSTRACT_PUBMED_17327674}}

	==About this Structure==		==About this Structure==
-	~~2G55~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G55 OCA].	+	[[2g55]] is a 1 chain structure of [[Trypsin]] with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G55 OCA].
		+
		+	==See Also==
		+	*[[Trypsin\|Trypsin]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~17327674~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:017327674</ref><references group="xtra"/>
	[[Category: Bos taurus]]		[[Category: Bos taurus]]
	[[Category: Trypsin]]		[[Category: Trypsin]]
	[[Category: Mueller-Dieckmann, C.]]		[[Category: Mueller-Dieckmann, C.]]
	[[Category: Weiss, M S.]]		[[Category: Weiss, M S.]]
-		+	[[Category: Hydrolase]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Mon Feb 16 15:36:59 2009''~~	+