2htb - Revision history

OCA at 10:01, 30 August 2023

2023-08-30T10:01:33Z

←Older revision		Revision as of 10:01, 30 August 2023
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	<StructureSection load='2htb' size='340' side='right'caption='[[2htb]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2htb' size='340' side='right'caption='[[2htb]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HTB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HTB FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat">~~<div style='overflow: auto; max~~-~~height: 3em;'>[[1jov\|1jov]]~~, [[~~1l7j~~\|~~1l7j~~]]~~, [[1z45\|1z45]], [[1lur\|1lur]], [[1snz\|1snz]]</div>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.5Å</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2htb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2htb OCA], [https://pdbe.org/2htb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2htb RCSB], [https://www.ebi.ac.uk/pdbsum/2htb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2htb ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2htb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2htb OCA], [https://pdbe.org/2htb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2htb RCSB], [https://www.ebi.ac.uk/pdbsum/2htb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2htb ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/YEAD_SALTY YEAD_SALTY] Probably functions as a hexose-6-phosphate 1-epimerase.<ref>PMID:17242513</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Chittori, S]]~~	+	[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
-	~~[[Category: Murthy, M R~~.N]]	+	[[Category: Chittori S]]
-	[[Category: ~~Savithri, H~~ S]]	+	[[Category: Murthy MRN]]
-	[[Category: ~~Simanshu, D K~~]]	+	[[Category: Savithri HS]]
-	[[Category: ~~Aldose 1-epimerase~~]]	+	[[Category: Simanshu DK]]
-	[[Category: ~~Carbohydrate]]~~	+
-	~~[[Category: Galm]]~~	+
-	~~[[Category: Isomerase]]~~	+
-	~~[[Category: Mutarotase]]~~	+
-	~~[[Category: Salmonella typhimurium]]~~	+
-	~~[[Category: Sugar phosphate]]~~	+
-	~~[[Category: Yead~~]]	+

OCA at 11:12, 5 January 2022

2022-01-05T11:12:46Z

←Older revision		Revision as of 11:12, 5 January 2022
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	<StructureSection load='2htb' size='340' side='right'caption='[[2htb]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2htb' size='340' side='right'caption='[[2htb]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2HTB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HTB FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jov\|1jov]], [[1l7j\|1l7j]], [[1z45\|1z45]], [[1lur\|1lur]], [[1snz\|1snz]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1jov\|1jov]], [[1l7j\|1l7j]], [[1z45\|1z45]], [[1lur\|1lur]], [[1snz\|1snz]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2htb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2htb OCA], [~~http~~://pdbe.org/2htb PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2htb RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2htb PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2htb ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2htb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2htb OCA], [https://pdbe.org/2htb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2htb RCSB], [https://www.ebi.ac.uk/pdbsum/2htb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2htb ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 10:15, 1 April 2020

2020-04-01T10:15:03Z

←Older revision		Revision as of 10:15, 1 April 2020
Line 1:		Line 1:

	==Crystal Structure of a putative mutarotase (YeaD) from Salmonella typhimurium in monoclinic form==		==Crystal Structure of a putative mutarotase (YeaD) from Salmonella typhimurium in monoclinic form==
-	<StructureSection load='2htb' size='340' side='right' caption='[[2htb]], [[Resolution\|resolution]] 2.50Å' scene=''>	+	<StructureSection load='2htb' size='340' side='right'caption='[[2htb]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HTB FirstGlance]. <br>		<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HTB FirstGlance]. <br>
Line 30:		Line 30:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Chittori, S]]		[[Category: Chittori, S]]
	[[Category: Murthy, M R.N]]		[[Category: Murthy, M R.N]]

OCA at 06:19, 27 June 2018

2018-06-27T06:19:47Z

←Older revision		Revision as of 06:19, 27 June 2018
Line 1:		Line 1:
		+
	==Crystal Structure of a putative mutarotase (YeaD) from Salmonella typhimurium in monoclinic form==		==Crystal Structure of a putative mutarotase (YeaD) from Salmonella typhimurium in monoclinic form==
	<StructureSection load='2htb' size='340' side='right' caption='[[2htb]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2htb' size='340' side='right' caption='[[2htb]], [[Resolution\|resolution]] 2.50Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HTB FirstGlance]. <br>		<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HTB FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jov\|1jov]], [[1l7j\|1l7j]], [[1z45\|1z45]], [[1lur\|1lur]], [[1snz\|1snz]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jov\|1jov]], [[1l7j\|1l7j]], [[1z45\|1z45]], [[1lur\|1lur]], [[1snz\|1snz]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2htb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2htb OCA], [http://pdbe.org/2htb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2htb RCSB], [http://www.ebi.ac.uk/pdbsum/2htb PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2htb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2htb OCA], [http://pdbe.org/2htb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2htb RCSB], [http://www.ebi.ac.uk/pdbsum/2htb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2htb ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 10:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ht/2htb_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ht/2htb_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2htb ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 09:48, 11 September 2015

2015-09-11T09:48:10Z

←Older revision		Revision as of 09:48, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2htb' size='340' side='right' caption='[[2htb]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='2htb' size='340' side='right' caption='[[2htb]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure ~~with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]~~. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HTB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HTB FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jov\|1jov]], [[1l7j\|1l7j]], [[1z45\|1z45]], [[1lur\|1lur]], [[1snz\|1snz]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jov\|1jov]], [[1l7j\|1l7j]], [[1z45\|1z45]], [[1lur\|1lur]], [[1snz\|1snz]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">yeaD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90371 Salmonella enterica subsp. enterica serovar Typhimurium])</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2htb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2htb OCA], [http://pdbe.org/2htb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2htb RCSB], [http://www.ebi.ac.uk/pdbsum/2htb PDBsum]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2htb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2htb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2htb RCSB], [http://www.ebi.ac.uk/pdbsum/2htb PDBsum]</span></td></tr>	+
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 25:		Line 24:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2htb" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
	[[Category: Chittori, S]]		[[Category: Chittori, S]]
	[[Category: Murthy, M R.N]]		[[Category: Murthy, M R.N]]

OCA at 08:56, 16 January 2015

2015-01-16T08:56:54Z

←Older revision		Revision as of 08:56, 16 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HTB FirstGlance]. <br>		<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HTB FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jov\|1jov]], [[1l7j\|1l7j]], [[1z45\|1z45]], [[1lur\|1lur]], [[1snz\|1snz]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jov\|1jov]], [[1l7j\|1l7j]], [[1z45\|1z45]], [[1lur\|1lur]], [[1snz\|1snz]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">yeaD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90371 Salmonella enterica subsp. enterica serovar Typhimurium])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">yeaD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90371 Salmonella enterica subsp. enterica serovar Typhimurium])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2htb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2htb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2htb RCSB], [http://www.ebi.ac.uk/pdbsum/2htb PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2htb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2htb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2htb RCSB], [http://www.ebi.ac.uk/pdbsum/2htb PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 30:		Line 30:
	</StructureSection>		</StructureSection>
	[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]		[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
-	[[Category: Chittori, S.]]	+	[[Category: Chittori, S]]
-	[[Category: Murthy, M R.N.]]	+	[[Category: Murthy, M R.N]]
-	[[Category: Savithri, H S.]]	+	[[Category: Savithri, H S]]
-	[[Category: Simanshu, D K.]]	+	[[Category: Simanshu, D K]]
	[[Category: Aldose 1-epimerase]]		[[Category: Aldose 1-epimerase]]
	[[Category: Carbohydrate]]		[[Category: Carbohydrate]]

OCA at 10:27, 30 September 2014

2014-09-30T10:27:50Z

←Older revision		Revision as of 10:27, 30 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2htb.~~png~~\|~~left~~\|200px]]	+	==Crystal Structure of a putative mutarotase (YeaD) from Salmonella typhimurium in monoclinic form==
		+	<StructureSection load='2htb' size='340' side='right' caption='[[2htb]], [[Resolution\|resolution]] 2.50Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2htb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HTB FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1jov\|1jov]], [[1l7j\|1l7j]], [[1z45\|1z45]], [[1lur\|1lur]], [[1snz\|1snz]]</td></tr>
		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">yeaD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90371 Salmonella enterica subsp. enterica serovar Typhimurium])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2htb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2htb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2htb RCSB], [http://www.ebi.ac.uk/pdbsum/2htb PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ht/2htb_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Salmonella typhimurium YeaD (stYeaD), annotated as a putative aldose 1-epimerase, has a very low sequence identity to other well characterized mutarotases. Sequence analysis suggested that the catalytic residues and a few of the substrate-binding residues of galactose mutarotases (GalMs) are conserved in stYeaD. Determination of the crystal structure of stYeaD in an orthorhombic form at 1.9 A resolution and in a monoclinic form at 2.5 A resolution revealed this protein to adopt the beta-sandwich fold similar to GalMs. Structural comparison of stYeaD with GalMs has permitted the identification of residues involved in catalysis and substrate binding. In spite of the similar fold and conservation of catalytic residues, minor but significant differences were observed in the substrate-binding pocket. These analyses pointed out the possible role of Arg74 and Arg99, found only in YeaD-like proteins, in ligand anchoring and suggested that the specificity of stYeaD may be distinct from those of GalMs.

-	~~{{STRUCTURE_2htb\| PDB=2htb \| SCENE= }}~~	+	Structure of the putative mutarotase YeaD from Salmonella typhimurium: structural comparison with galactose mutarotases.,Chittori S, Simanshu DK, Savithri HS, Murthy MR Acta Crystallogr D Biol Crystallogr. 2007 Feb;63(Pt 2):197-205. Epub 2007, Jan 16. PMID:17242513<ref>PMID:17242513</ref>

-	~~===Crystal Structure~~ of ~~a putative mutarotase (YeaD) from Salmonella typhimurium in monoclinic form===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_17242513}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[2htb]] is a 4 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Salmonella_enterica_subsp~~.~~_enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:017242513<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]		[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
	[[Category: Chittori, S.]]		[[Category: Chittori, S.]]

OCA: Protected "2htb" [edit=sysop:move=sysop]

2013-01-07T14:55:29Z

Protected "2htb" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:55, 7 January 2013

OCA at 14:55, 7 January 2013

2013-01-07T14:55:26Z

←Older revision		Revision as of 14:55, 7 January 2013
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-	{{Seed}}
	[[Image:2htb.png\|left\|200px]]		[[Image:2htb.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_2htb\| PDB=2htb \| SCENE= }}		{{STRUCTURE_2htb\| PDB=2htb \| SCENE= }}

	===Crystal Structure of a putative mutarotase (YeaD) from Salmonella typhimurium in monoclinic form===		===Crystal Structure of a putative mutarotase (YeaD) from Salmonella typhimurium in monoclinic form===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_17242513}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 17242513 is the PubMed ID number.
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	{{ABSTRACT_PUBMED_17242513}}		{{ABSTRACT_PUBMED_17242513}}

	==About this Structure==		==About this Structure==
-	~~2HTB~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/~~Salmonella_typhimurium~~ Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA].	+	[[2htb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~17242513~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:017242513</ref><references group="xtra"/>
-	[[Category: Salmonella typhimurium]]	+	[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
	[[Category: Chittori, S.]]		[[Category: Chittori, S.]]
	[[Category: Murthy, M R.N.]]		[[Category: Murthy, M R.N.]]
Line 32:		Line 20:
	[[Category: Carbohydrate]]		[[Category: Carbohydrate]]
	[[Category: Galm]]		[[Category: Galm]]
		+	[[Category: Isomerase]]
	[[Category: Mutarotase]]		[[Category: Mutarotase]]
	[[Category: Salmonella typhimurium]]		[[Category: Salmonella typhimurium]]
	[[Category: Sugar phosphate]]		[[Category: Sugar phosphate]]
	[[Category: Yead]]		[[Category: Yead]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 19:00:43 2009''

OCA at 17:00, 17 February 2009

2009-02-17T17:00:45Z

←Older revision		Revision as of 17:00, 17 February 2009
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
-	2HTB is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA].	+	2HTB is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HTB OCA].

	==Reference==		==Reference==
-	Structure of the putative mutarotase YeaD from Salmonella typhimurium: structural comparison with galactose mutarotases., Chittori S, Simanshu DK, Savithri HS, Murthy MR, Acta Crystallogr D Biol Crystallogr. 2007 Feb;63(Pt 2):197-205. Epub 2007, Jan 16. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/17242513 17242513]~~	+	<ref group="xtra">PMID:17242513</ref><references group="xtra"/>
	[[Category: Salmonella typhimurium]]		[[Category: Salmonella typhimurium]]
-	[[Category: Single protein]]
	[[Category: Chittori, S.]]		[[Category: Chittori, S.]]
	[[Category: Murthy, M R.N.]]		[[Category: Murthy, M R.N.]]
Line 38:		Line 37:
	[[Category: Yead]]		[[Category: Yead]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue ~~Jul 29 03~~:06:~~50 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 19:00:43 2009''