2j37 - Revision history

OCA at 09:34, 9 May 2024

2024-05-09T09:34:04Z

←Older revision		Revision as of 09:34, 9 May 2024
Line 3:		Line 3:
	<SX load='2j37' size='340' side='right' viewer='molstar' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>		<SX load='2j37' size='340' side='right' viewer='molstar' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [https://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens~~], [https://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.~~] and [https://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J37 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [https://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J37 FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style~~=~~'overflow: auto; max-height: 3em;'~~>~~[[1dul\|1dul]]~~, [[~~1hq1~~\|~~1hq1~~]]~~, [[1p85\|1p85]], [[1p86\|1p86]], [[2aw4\|2aw4]], [[2awb\|2awb]], [[2j28\|2j28]]</div>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution\|Resolution]] 8Å</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [https://pdbe.org/2j37 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [https://www.ebi.ac.uk/pdbsum/2j37 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j37 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [https://pdbe.org/2j37 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [https://www.ebi.ac.uk/pdbsum/2j37 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j37 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/~~SRP54_CANFA SRP54_CANFA]~~] Binds to ~~the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein)~~.	+	[https://www.uniprot.org/uniprot/O81229_MAIZE O81229_MAIZE] Binds to 23S rRNA.[ARBA:ARBA00002500]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 33:		Line 33:
	*[[Ribosomal protein L31\|Ribosomal protein L31]]		*[[Ribosomal protein L31\|Ribosomal protein L31]]
	*[[Ribosomal protein L35\|Ribosomal protein L35]]		*[[Ribosomal protein L35\|Ribosomal protein L35]]
-	*[[Signal recognition particle ~~protein~~\|Signal recognition particle ~~protein~~]]	+	*[[Signal recognition particle 3D structures\|Signal recognition particle 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 43:		Line 43:
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Triticum sp]]		[[Category: Triticum sp]]
-	[[Category: Becker, T]]	+	[[Category: Becker T]]
-	[[Category: Beckmann, R]]	+	[[Category: Beckmann R]]
-	[[Category: Blau, M]]	+	[[Category: Blau M]]
-	[[Category: Halic, M]]	+	[[Category: Halic M]]
-	[[Category: Mielke, T]]	+	[[Category: Mielke T]]
-	[[Category: Pool~~, M R~~]]	+	[[Category: Pool MR]]
-	[[Category: Sinning, I]]	+	[[Category: Sinning I]]
-	[[Category: Wild, K]]	+	[[Category: Wild K]]
-	~~[[Category: Ribosome]]~~	+
-	~~[[Category: Srp]]~~	+
-	~~[[Category: Translation/rna~~]]	+

OCA at 10:34, 12 January 2022

2022-01-12T10:34:28Z

←Older revision		Revision as of 10:34, 12 January 2022
Line 3:		Line 3:
	<SX load='2j37' size='340' side='right' viewer='molstar' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>		<SX load='2j37' size='340' side='right' viewer='molstar' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [~~http~~://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [~~http~~://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [~~http~~://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.] and [~~http~~://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2J37 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [https://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [https://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.] and [https://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J37 FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dul\|1dul]], [[1hq1\|1hq1]], [[1p85\|1p85]], [[1p86\|1p86]], [[2aw4\|2aw4]], [[2awb\|2awb]], [[2j28\|2j28]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1dul\|1dul]], [[1hq1\|1hq1]], [[1p85\|1p85]], [[1p86\|1p86]], [[2aw4\|2aw4]], [[2awb\|2awb]], [[2j28\|2j28]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [~~http~~://pdbe.org/2j37 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2j37 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2j37 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [https://pdbe.org/2j37 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [https://www.ebi.ac.uk/pdbsum/2j37 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j37 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/SRP54_CANFA SRP54_CANFA]] Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein).	+	[[https://www.uniprot.org/uniprot/SRP54_CANFA SRP54_CANFA]] Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 16:54, 10 April 2020

2020-04-10T16:54:36Z

←Older revision		Revision as of 16:54, 10 April 2020
Line 3:		Line 3:
	<SX load='2j37' size='340' side='right' viewer='molstar' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>		<SX load='2j37' size='340' side='right' viewer='molstar' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2J37 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2J37 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dul\|1dul]], [[1hq1\|1hq1]], [[1p85\|1p85]], [[1p86\|1p86]], [[2aw4\|2aw4]], [[2awb\|2awb]], [[2j28\|2j28]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dul\|1dul]], [[1hq1\|1hq1]], [[1p85\|1p85]], [[1p86\|1p86]], [[2aw4\|2aw4]], [[2awb\|2awb]], [[2j28\|2j28]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [http://pdbe.org/2j37 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [http://www.ebi.ac.uk/pdbsum/2j37 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2j37 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [http://pdbe.org/2j37 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [http://www.ebi.ac.uk/pdbsum/2j37 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2j37 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 16:55, 6 March 2020

2020-03-06T16:55:17Z

←Older revision		Revision as of 16:55, 6 March 2020
Line 1:		Line 1:

	==MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS==		==MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS==
-	<~~StructureSection~~ load='2j37' size='340' side='right'caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>	+	<SX load='2j37' size='340' side='right' viewer='molstar' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J37 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J37 FirstGlance]. <br>
Line 37:		Line 37:
	<references/>		<references/>
	__TOC__		__TOC__
-	</~~StructureSection~~>	+	</SX>
	[[Category: Canis sp]]		[[Category: Canis sp]]
	[[Category: Haloarcula marismortui]]		[[Category: Haloarcula marismortui]]

OCA at 07:34, 10 April 2019

2019-04-10T07:34:52Z

←Older revision		Revision as of 07:34, 10 April 2019
Line 1:		Line 1:

	==MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS==		==MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS==
-	<StructureSection load='2j37' size='340' side='right' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>	+	<StructureSection load='2j37' size='340' side='right'caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J37 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J37 FirstGlance]. <br>
Line 41:		Line 41:
	[[Category: Haloarcula marismortui]]		[[Category: Haloarcula marismortui]]
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
		+	[[Category: Large Structures]]
	[[Category: Triticum sp]]		[[Category: Triticum sp]]
	[[Category: Becker, T]]		[[Category: Becker, T]]

OCA at 05:34, 8 March 2018

2018-03-08T05:34:18Z

←Older revision		Revision as of 05:34, 8 March 2018
Line 1:		Line 1:
		+
	==MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS==		==MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS==
	<StructureSection load='2j37' size='340' side='right' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>		<StructureSection load='2j37' size='340' side='right' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/~~Canis_sp. Canis sp.~~], [http://en.wikipedia.org/wiki/~~Haloarcula_marismortui Haloarcula marismortui~~], [http://en.wikipedia.org/wiki/~~Homo_sapiens Homo sapiens~~] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J37 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens], [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J37 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dul\|1dul]], [[1hq1\|1hq1]], [[1p85\|1p85]], [[1p86\|1p86]], [[2aw4\|2aw4]], [[2awb\|2awb]], [[2j28\|2j28]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dul\|1dul]], [[1hq1\|1hq1]], [[1p85\|1p85]], [[1p86\|1p86]], [[2aw4\|2aw4]], [[2awb\|2awb]], [[2j28\|2j28]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [http://pdbe.org/2j37 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [http://www.ebi.ac.uk/pdbsum/2j37 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [http://pdbe.org/2j37 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [http://www.ebi.ac.uk/pdbsum/2j37 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2j37 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[http://www.uniprot.org/uniprot/SRP54_CANFA SRP54_CANFA]] Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein)~~. [[http://www.uniprot.org/uniprot/SRP19_HUMAN SRP19_HUMAN]] Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP~~.	+	[[http://www.uniprot.org/uniprot/SRP54_CANFA SRP54_CANFA]] Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j3/2j37_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j3/2j37_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2j37 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 08:35, 11 September 2015

2015-09-11T08:35:39Z

←Older revision		Revision as of 08:35, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2j37' size='340' side='right' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>		<StructureSection load='2j37' size='340' side='right' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J37 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J37 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dul\|1dul]], [[1hq1\|1hq1]], [[1p85\|1p85]], [[1p86\|1p86]], [[2aw4\|2aw4]], [[2awb\|2awb]], [[2j28\|2j28]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dul\|1dul]], [[1hq1\|1hq1]], [[1p85\|1p85]], [[1p86\|1p86]], [[2aw4\|2aw4]], [[2awb\|2awb]], [[2j28\|2j28]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [http://www.ebi.ac.uk/pdbsum/2j37 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [http://pdbe.org/2j37 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [http://www.ebi.ac.uk/pdbsum/2j37 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2j37" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 13:56, 25 December 2014

2014-12-25T13:56:57Z

←Older revision		Revision as of 13:56, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J37 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J37 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dul\|1dul]], [[1hq1\|1hq1]], [[1p85\|1p85]], [[1p86\|1p86]], [[2aw4\|2aw4]], [[2awb\|2awb]], [[2j28\|2j28]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dul\|1dul]], [[1hq1\|1hq1]], [[1p85\|1p85]], [[1p86\|1p86]], [[2aw4\|2aw4]], [[2awb\|2awb]], [[2j28\|2j28]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [http://www.ebi.ac.uk/pdbsum/2j37 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [http://www.ebi.ac.uk/pdbsum/2j37 PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/SRP54_CANFA SRP54_CANFA]] Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). [[http://www.uniprot.org/uniprot/SRP19_HUMAN SRP19_HUMAN]] Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 34:		Line 36:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Canis sp.]]	+	[[Category: Canis sp]]
	[[Category: Haloarcula marismortui]]		[[Category: Haloarcula marismortui]]
	[[Category: Homo sapiens]]		[[Category: Homo sapiens]]
-	[[Category: Triticum sp.]]	+	[[Category: Triticum sp]]
-	[[Category: Becker, T.]]	+	[[Category: Becker, T]]
-	[[Category: Beckmann, R.]]	+	[[Category: Beckmann, R]]
-	[[Category: Blau, M.]]	+	[[Category: Blau, M]]
-	[[Category: Halic, M.]]	+	[[Category: Halic, M]]
-	[[Category: Mielke, T.]]	+	[[Category: Mielke, T]]
-	[[Category: Pool, M R.]]	+	[[Category: Pool, M R]]
-	[[Category: Sinning, I.]]	+	[[Category: Sinning, I]]
-	[[Category: Wild, K.]]	+	[[Category: Wild, K]]
	[[Category: Ribosome]]		[[Category: Ribosome]]
	[[Category: Srp]]		[[Category: Srp]]
	[[Category: Translation/rna]]		[[Category: Translation/rna]]

OCA at 05:13, 29 September 2014

2014-09-29T05:13:48Z

←Older revision		Revision as of 05:13, 29 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2j37.~~png~~\|~~left~~\|200px]]	+	==MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS==
		+	<StructureSection load='2j37' size='340' side='right' caption='[[2j37]], [[Resolution\|resolution]] 8.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2J37 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1dul\|1dul]], [[1hq1\|1hq1]], [[1p85\|1p85]], [[1p86\|1p86]], [[2aw4\|2aw4]], [[2awb\|2awb]], [[2j28\|2j28]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j37 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2j37 RCSB], [http://www.ebi.ac.uk/pdbsum/2j37 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j3/2j37_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Membrane and secretory proteins can be co-translationally inserted into or translocated across the membrane. This process is dependent on signal sequence recognition on the ribosome by the signal recognition particle (SRP), which results in targeting of the ribosome-nascent-chain complex to the protein-conducting channel at the membrane. Here we present an ensemble of structures at subnanometre resolution, revealing the signal sequence both at the ribosomal tunnel exit and in the bacterial and eukaryotic ribosome-SRP complexes. Molecular details of signal sequence interaction in both prokaryotic and eukaryotic complexes were obtained by fitting high-resolution molecular models. The signal sequence is presented at the ribosomal tunnel exit in an exposed position ready for accommodation in the hydrophobic groove of the rearranged SRP54 M domain. Upon ribosome binding, the SRP54 NG domain also undergoes a conformational rearrangement, priming it for the subsequent docking reaction with the NG domain of the SRP receptor. These findings provide the structural basis for improving our understanding of the early steps of co-translational protein sorting.

-	~~{{STRUCTURE_2j37\| PDB=2j37 \| SCENE= }}~~	+	Following the signal sequence from ribosomal tunnel exit to signal recognition particle.,Halic M, Blau M, Becker T, Mielke T, Pool MR, Wild K, Sinning I, Beckmann R Nature. 2006 Nov 23;444(7118):507-11. Epub 2006 Oct 29. PMID:17086193<ref>PMID:17086193</ref>

-	~~===MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_17086193}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[2j37]] is a 8 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Canis_sp. Canis sp.]~~, ~~[http://en~~.~~wikipedia~~.~~org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en~~.~~wikipedia.org~~/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA].	+

	==See Also==		==See Also==
Line 15:		Line 30:
	*[[Ribosomal protein L35\|Ribosomal protein L35]]		*[[Ribosomal protein L35\|Ribosomal protein L35]]
	*[[Signal recognition particle protein\|Signal recognition particle protein]]		*[[Signal recognition particle protein\|Signal recognition particle protein]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:017086193<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Canis sp.]]		[[Category: Canis sp.]]
	[[Category: Haloarcula marismortui]]		[[Category: Haloarcula marismortui]]

OCA at 17:31, 20 October 2012

2012-10-20T17:31:24Z

←Older revision		Revision as of 17:31, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[2j37]] is a 8 chain structure ~~of [[Ribosomal protein L23]], [[Ribosomal protein L31]], [[Ribosomal protein L35]] and [[Signal recognition particle protein]]~~ with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA].	+	[[2j37]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Canis_sp. Canis sp.], [http://en.wikipedia.org/wiki/Haloarcula_marismortui Haloarcula marismortui], [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Triticum_sp. Triticum sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J37 OCA].

	==See Also==		==See Also==