2jqv - Revision history

OCA at 10:11, 20 December 2023

2023-12-20T10:11:30Z

←Older revision		Revision as of 10:11, 20 December 2023
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	==Solution structure At3g28950.1 from Arabidopsis thaliana==		==Solution structure At3g28950.1 from Arabidopsis thaliana==
-	<StructureSection load='2jqv' size='340' side='right'caption='[[2jqv~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='2jqv' size='340' side='right'caption='[[2jqv]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2jqv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Arath Arath~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JQV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2jqv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JQV FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>At3g28950.1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~3702 ARATH])~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jqv OCA], [https://pdbe.org/2jqv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jqv RCSB], [https://www.ebi.ac.uk/pdbsum/2jqv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jqv ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jqv OCA], [https://pdbe.org/2jqv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jqv RCSB], [https://www.ebi.ac.uk/pdbsum/2jqv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jqv ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/AIG2C_ARATH AIG2C_ARATH] Putative gamma-glutamylcyclotransferase.[UniProtKB:O75223]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 30:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Arath~~]]	+	[[Category: Arabidopsis thaliana]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Structural genomic]]~~	+	[[Category: Peterson FC]]
-	~~[[Category: Cruz, N B.de la]]~~	+	[[Category: Volkman BF]]
-	[[Category: Peterson~~, F C~~]]	+	[[Category: De la Cruz NB]]
-	[[Category: Volkman~~, B F~~]]	+
-	[[Category: ~~At3g28950 1]]~~	+
-	~~[[Category: Cesg]]~~	+
-	~~[[Category: PSI, Protein structure initiative~~]]	+

OCA at 07:53, 7 April 2021

2021-04-07T07:53:55Z

←Older revision		Revision as of 07:53, 7 April 2021
Line 1:		Line 1:

	==Solution structure At3g28950.1 from Arabidopsis thaliana==		==Solution structure At3g28950.1 from Arabidopsis thaliana==
-	<StructureSection load='2jqv' size='340' side='right' caption='[[2jqv]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='2jqv' size='340' side='right'caption='[[2jqv]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2jqv]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Arath Arath]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2JQV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2jqv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arath Arath]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JQV FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">At3g28950.1 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">At3g28950.1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2jqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jqv OCA], [~~http~~://pdbe.org/2jqv PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2jqv RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2jqv PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2jqv ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jqv OCA], [https://pdbe.org/2jqv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jqv RCSB], [https://www.ebi.ac.uk/pdbsum/2jqv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jqv ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 31:		Line 31:
	</StructureSection>		</StructureSection>
	[[Category: Arath]]		[[Category: Arath]]
		+	[[Category: Large Structures]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Cruz, N B.de la]]		[[Category: Cruz, N B.de la]]

OCA at 06:27, 11 July 2018

2018-07-11T06:27:58Z

←Older revision		Revision as of 06:27, 11 July 2018
Line 1:		Line 1:
		+
	==Solution structure At3g28950.1 from Arabidopsis thaliana==		==Solution structure At3g28950.1 from Arabidopsis thaliana==
	<StructureSection load='2jqv' size='340' side='right' caption='[[2jqv]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2jqv' size='340' side='right' caption='[[2jqv]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[2jqv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JQV FirstGlance]. <br>		<table><tr><td colspan='2'>[[2jqv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JQV FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">At3g28950.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">At3g28950.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jqv OCA], [http://pdbe.org/2jqv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2jqv RCSB], [http://www.ebi.ac.uk/pdbsum/2jqv PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jqv OCA], [http://pdbe.org/2jqv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2jqv RCSB], [http://www.ebi.ac.uk/pdbsum/2jqv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2jqv ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 10:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jq/2jqv_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jq/2jqv_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jqv ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 14:15, 11 September 2015

2015-09-11T14:15:53Z

←Older revision		Revision as of 14:15, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2jqv' size='340' side='right' caption='[[2jqv]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2jqv' size='340' side='right' caption='[[2jqv]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2jqv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Arabidopsis_thaliana Arabidopsis thaliana~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JQV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2jqv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JQV FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">At3g28950.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ~~Arabidopsis thaliana~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">At3g28950.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jqv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2jqv RCSB], [http://www.ebi.ac.uk/pdbsum/2jqv PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jqv OCA], [http://pdbe.org/2jqv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2jqv RCSB], [http://www.ebi.ac.uk/pdbsum/2jqv PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 24:		Line 24:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2jqv" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Arabidopsis thaliana~~]]	+	[[Category: Arath]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Cruz, N B.de la]]		[[Category: Cruz, N B.de la]]

OCA at 14:44, 19 January 2015

2015-01-19T14:44:43Z

←Older revision		Revision as of 14:44, 19 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2jqv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JQV FirstGlance]. <br>		<table><tr><td colspan='2'>[[2jqv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JQV FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">At3g28950.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">At3g28950.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jqv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2jqv RCSB], [http://www.ebi.ac.uk/pdbsum/2jqv PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jqv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2jqv RCSB], [http://www.ebi.ac.uk/pdbsum/2jqv PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 29:		Line 29:
	</StructureSection>		</StructureSection>
	[[Category: Arabidopsis thaliana]]		[[Category: Arabidopsis thaliana]]
-	[[Category: ~~CESG, Center for Eukaryotic~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Cruz, N B.de la.]]	+	[[Category: Cruz, N B.de la]]
-	[[Category: Peterson, F C.]]	+	[[Category: Peterson, F C]]
-	[[Category: Volkman, B F.]]	+	[[Category: Volkman, B F]]
	[[Category: At3g28950 1]]		[[Category: At3g28950 1]]
-	[[Category: Center for eukaryotic structural genomic]]
	[[Category: Cesg]]		[[Category: Cesg]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category: Psi]]~~	+
-	~~[[Category: Structural genomic~~]]	+

OCA at 08:25, 30 September 2014

2014-09-30T08:25:45Z

←Older revision		Revision as of 08:25, 30 September 2014
Line 1:		Line 1:
-	[[~~Image~~:2jqv.~~png\|left~~\|200px]]	+	==Solution structure At3g28950.1 from Arabidopsis thaliana==
		+	<StructureSection load='2jqv' size='340' side='right' caption='[[2jqv]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2jqv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JQV FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">At3g28950.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jqv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2jqv RCSB], [http://www.ebi.ac.uk/pdbsum/2jqv PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jq/2jqv_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	We determined the solution structure of At3g28950 from A. thaliana, a homolog of At5g39720, whose structure we solved earlier. The secondary structure of the 165-aa protein consists of a 5-strand antiparallel beta-barrel domain flanked by two alpha-helices and a 2-strand beta-sheet; an additional free C-terminal alpha-helix extends into solution. Bioinformatic searches and analyses suggest that members of this growing set of structurally related proteins have been recruited to serve a wide variety of functions ranging from gamma-glutamyl cyclotransferase activity to participation in plant responses to chemical and biotic stimuli. Expression of a human homolog is elevated in bladder cancer tissues. Expression patterns for At3g28950 and its Arabidopsis paralogs suggest that each one evolved a different physiological role. The At3g28950 structure was solved as part of a structural genomics effort, and the results demonstrate how such a project can further understanding of genome evolution in addition to sequence-structure and structure-function relationships. Proteins 2008. (c) 2008 Wiley-Liss, Inc.

-	~~{{STRUCTURE_2jqv\| PDB=2jqv \| SCENE= }}~~	+	Solution structure of At3g28950 from Arabidopsis thaliana.,de la Cruz NB, Peterson FC, Volkman BF Proteins. 2008 May 1;71(2):546-51. PMID:18214976<ref>PMID:18214976</ref>

-	~~===Solution structure At3g28950.1 from Arabidopsis thaliana===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_18214976}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[2jqv]] is~~ a ~~1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]~~. ~~Full experimental information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:018214976<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Arabidopsis thaliana]]		[[Category: Arabidopsis thaliana]]
	[[Category: CESG, Center for Eukaryotic Structural Genomics.]]		[[Category: CESG, Center for Eukaryotic Structural Genomics.]]

OCA: Protected "2jqv" [edit=sysop:move=sysop]

2013-01-07T13:27:10Z

Protected "2jqv" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:27, 7 January 2013

OCA at 13:27, 7 January 2013

2013-01-07T13:27:07Z

←Older revision		Revision as of 13:27, 7 January 2013
Line 1:		Line 1:
-	{{Seed}}
	[[Image:2jqv.png\|left\|200px]]		[[Image:2jqv.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2jqv", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2jqv\| PDB=2jqv \| SCENE= }}		{{STRUCTURE_2jqv\| PDB=2jqv \| SCENE= }}

	===Solution structure At3g28950.1 from Arabidopsis thaliana===		===Solution structure At3g28950.1 from Arabidopsis thaliana===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_18214976}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 18214976 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_18214976}}		{{ABSTRACT_PUBMED_18214976}}

	==About this Structure==		==About this Structure==
-	~~2JQV~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA].	+	[[2jqv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~18214976~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:018214976</ref><references group="xtra"/>
	[[Category: Arabidopsis thaliana]]		[[Category: Arabidopsis thaliana]]
	[[Category: CESG, Center for Eukaryotic Structural Genomics.]]		[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
Line 35:		Line 23:
	[[Category: Psi]]		[[Category: Psi]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 00:21:53 2009''

OCA at 22:21, 17 February 2009

2009-02-17T22:21:55Z

←Older revision		Revision as of 22:21, 17 February 2009
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
-	2JQV is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA].	+	2JQV is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA].

	==Reference==		==Reference==
-	~~Solution structure of At3g28950 from Arabidopsis thaliana., de la Cruz NB, Peterson FC, Volkman BF, Proteins. 2008 May 1;71(2):546-51.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/18214976 18214976]~~	+	<ref group="xtra">PMID:18214976</ref><references group="xtra"/>
	[[Category: Arabidopsis thaliana]]		[[Category: Arabidopsis thaliana]]
-	[[Category: Single protein]]
	[[Category: CESG, Center for Eukaryotic Structural Genomics.]]		[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
	[[Category: Cruz, N B.de la.]]		[[Category: Cruz, N B.de la.]]
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	[[Category: Structural genomic]]		[[Category: Structural genomic]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Jul 9 10~~:05:~~44 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 00:21:53 2009''

OCA at 07:05, 9 July 2008

2008-07-09T07:05:45Z

←Older revision		Revision as of 07:05, 9 July 2008
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-	[[Image:2jqv.~~jpg~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:2jqv.png\|left\|200px]]

	<!--		<!--
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	{{STRUCTURE_2jqv\| PDB=2jqv \| SCENE= }}		{{STRUCTURE_2jqv\| PDB=2jqv \| SCENE= }}

-	~~'''~~Solution structure At3g28950.1 from Arabidopsis thaliana~~'''~~	+	===Solution structure At3g28950.1 from Arabidopsis thaliana===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_18214976}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 18214976 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_18214976}}

	==About this Structure==		==About this Structure==
-	2JQV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full ~~crystallographic~~ information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA].	+	2JQV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQV OCA].
		+
		+	==Reference==
		+	Solution structure of At3g28950 from Arabidopsis thaliana., de la Cruz NB, Peterson FC, Volkman BF, Proteins. 2008 May 1;71(2):546-51. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18214976 18214976]
	[[Category: Arabidopsis thaliana]]		[[Category: Arabidopsis thaliana]]
	[[Category: Single protein]]		[[Category: Single protein]]
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	[[Category: Psi]]		[[Category: Psi]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sun May~~ ~~4 09~~:11:53 2008''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 9 10:05:44 2008''