2k4j - Revision history

OCA at 09:44, 9 May 2024

2024-05-09T09:44:33Z

←Older revision		Revision as of 09:44, 9 May 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_J99 Helicobacter pylori J99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K4J FirstGlance]. <br>		<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_J99 Helicobacter pylori J99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K4J FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [https://pdbe.org/2k4j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [https://www.ebi.ac.uk/pdbsum/2k4j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k4j ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [https://pdbe.org/2k4j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [https://www.ebi.ac.uk/pdbsum/2k4j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k4j ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 08:41, 14 June 2023

2023-06-14T08:41:26Z

←Older revision		Revision as of 08:41, 14 June 2023
Line 1:		Line 1:

	==ArsR DNA Binding Domain==		==ArsR DNA Binding Domain==
-	<StructureSection load='2k4j' size='340' side='right'caption='[[2k4j~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='2k4j' size='340' side='right'caption='[[2k4j]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Campylobacter_pylori_j99 Campylobacter~~ pylori ~~j99~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K4J FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_J99 Helicobacter pylori J99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K4J FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">jhp_0152 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=85963 Campylobacter pylori J99])</td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [https://pdbe.org/2k4j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [https://www.ebi.ac.uk/pdbsum/2k4j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k4j ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [https://pdbe.org/2k4j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [https://www.ebi.ac.uk/pdbsum/2k4j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k4j ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q9ZMR6_HELPJ Q9ZMR6_HELPJ]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Campylobacter~~ pylori ~~j99~~]]	+	[[Category: Helicobacter pylori J99]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Cover~~, T L~~]]	+	[[Category: Cover TL]]
-	[[Category: Gupta~~, S S~~]]	+	[[Category: Gupta SS]]
-	[[Category: Krezel~~, A M]]~~	+	[[Category: Krezel AM]]
-	~~[[Category: Acid resistance]]~~	+
-	~~[[Category: Dna-binding]]~~	+
-	~~[[Category: Helicobacter pylori]]~~	+
-	~~[[Category: Phosphoprotein]]~~	+
-	~~[[Category: Response regulator]]~~	+
-	~~[[Category: Transcription]]~~	+
-	~~[[Category: Transcription regulation~~]]	+

OCA at 13:28, 24 November 2021

2021-11-24T13:28:22Z

←Older revision		Revision as of 13:28, 24 November 2021
Line 3:		Line 3:
	<StructureSection load='2k4j' size='340' side='right'caption='[[2k4j]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2k4j' size='340' side='right'caption='[[2k4j]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Campylobacter_pylori_j99 Campylobacter pylori j99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2K4J FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_pylori_j99 Campylobacter pylori j99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K4J FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">jhp_0152 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=85963 Campylobacter pylori J99])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">jhp_0152 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=85963 Campylobacter pylori J99])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [~~http~~://pdbe.org/2k4j PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2k4j PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2k4j ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [https://pdbe.org/2k4j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [https://www.ebi.ac.uk/pdbsum/2k4j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k4j ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 06:54, 19 February 2020

2020-02-19T06:54:38Z

←Older revision		Revision as of 06:54, 19 February 2020
Line 1:		Line 1:

	==ArsR DNA Binding Domain==		==ArsR DNA Binding Domain==
-	<StructureSection load='2k4j' size='340' side='right' caption='[[2k4j]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='2k4j' size='340' side='right'caption='[[2k4j]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_pylori_j99 Campylobacter pylori j99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K4J FirstGlance]. <br>		<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_pylori_j99 Campylobacter pylori j99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K4J FirstGlance]. <br>
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Campylobacter pylori j99]]		[[Category: Campylobacter pylori j99]]
		+	[[Category: Large Structures]]
	[[Category: Cover, T L]]		[[Category: Cover, T L]]
	[[Category: Gupta, S S]]		[[Category: Gupta, S S]]

OCA at 10:08, 18 July 2018

2018-07-18T10:08:37Z

←Older revision		Revision as of 10:08, 18 July 2018
Line 1:		Line 1:
		+
	==ArsR DNA Binding Domain==		==ArsR DNA Binding Domain==
	<StructureSection load='2k4j' size='340' side='right' caption='[[2k4j]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2k4j' size='340' side='right' caption='[[2k4j]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_pylori_j99 Campylobacter pylori j99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K4J FirstGlance]. <br>		<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_pylori_j99 Campylobacter pylori j99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K4J FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">jhp_0152 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=85963 Campylobacter pylori J99])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">jhp_0152 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=85963 Campylobacter pylori J99])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [http://pdbe.org/2k4j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [http://www.ebi.ac.uk/pdbsum/2k4j PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [http://pdbe.org/2k4j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [http://www.ebi.ac.uk/pdbsum/2k4j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2k4j ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 10:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k4/2k4j_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k4/2k4j_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 15:59, 8 February 2016

2016-02-08T15:59:13Z

←Older revision		Revision as of 15:59, 8 February 2016
Line 14:		Line 14:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k4j ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 13:10, 10 September 2015

2015-09-10T13:10:40Z

←Older revision		Revision as of 13:10, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2k4j' size='340' side='right' caption='[[2k4j]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2k4j' size='340' side='right' caption='[[2k4j]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Helicobacter_pylori Helicobacter~~ pylori]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K4J FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_pylori_j99 Campylobacter pylori j99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K4J FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">jhp_0152 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~210 Helicobacter~~ pylori])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">jhp_0152 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=85963 Campylobacter pylori J99])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [http://www.ebi.ac.uk/pdbsum/2k4j PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [http://pdbe.org/2k4j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [http://www.ebi.ac.uk/pdbsum/2k4j PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 18:		Line 18:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Helicobacter~~ pylori]]	+	[[Category: Campylobacter pylori j99]]
	[[Category: Cover, T L]]		[[Category: Cover, T L]]
	[[Category: Gupta, S S]]		[[Category: Gupta, S S]]
Line 24:		Line 24:
	[[Category: Acid resistance]]		[[Category: Acid resistance]]
	[[Category: Dna-binding]]		[[Category: Dna-binding]]
		+	[[Category: Helicobacter pylori]]
	[[Category: Phosphoprotein]]		[[Category: Phosphoprotein]]
	[[Category: Response regulator]]		[[Category: Response regulator]]
	[[Category: Transcription]]		[[Category: Transcription]]
	[[Category: Transcription regulation]]		[[Category: Transcription regulation]]

OCA at 13:12, 19 January 2015

2015-01-19T13:12:56Z

←Older revision		Revision as of 13:12, 19 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K4J FirstGlance]. <br>		<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K4J FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">jhp_0152 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=210 Helicobacter pylori])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">jhp_0152 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=210 Helicobacter pylori])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [http://www.ebi.ac.uk/pdbsum/2k4j PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [http://www.ebi.ac.uk/pdbsum/2k4j PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 19:
	</StructureSection>		</StructureSection>
	[[Category: Helicobacter pylori]]		[[Category: Helicobacter pylori]]
-	[[Category: Cover, T L.]]	+	[[Category: Cover, T L]]
-	[[Category: Gupta, S S.]]	+	[[Category: Gupta, S S]]
-	[[Category: Krezel, A M.]]	+	[[Category: Krezel, A M]]
	[[Category: Acid resistance]]		[[Category: Acid resistance]]
	[[Category: Dna-binding]]		[[Category: Dna-binding]]
-	[[Category: Helicobacter pylori]]
	[[Category: Phosphoprotein]]		[[Category: Phosphoprotein]]
	[[Category: Response regulator]]		[[Category: Response regulator]]
	[[Category: Transcription]]		[[Category: Transcription]]
	[[Category: Transcription regulation]]		[[Category: Transcription regulation]]

OCA at 07:39, 30 September 2014

2014-09-30T07:39:32Z

←Older revision		Revision as of 07:39, 30 September 2014
Line 1:		Line 1:
-	~~[[Image:2k4j.png\|left\|200px]]~~	+	==ArsR DNA Binding Domain==
-		+	<StructureSection load='2k4j' size='340' side='right' caption='[[2k4j]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
-	~~{{STRUCTURE_2k4j\| PDB=2k4j \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2k4j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2K4J FirstGlance]. <br>
-	===ArsR DNA Binding Domain===	+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">jhp_0152 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=210 Helicobacter pylori])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k4j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k4j OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2k4j RCSB], [http://www.ebi.ac.uk/pdbsum/2k4j PDBsum]</span></td></tr>
-	~~{{ABSTRACT_PUBMED_019117956}}~~	+	<table>
-		+	== Evolutionary Conservation ==
-	==~~About this Structure~~==	+	[[Image:Consurf_key_small.gif\|200px\|right]]
-	[[2k4j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K4J OCA].	+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k4/2k4j_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Helicobacter pylori]]		[[Category: Helicobacter pylori]]
	[[Category: Cover, T L.]]		[[Category: Cover, T L.]]

OCA: Protected "2k4j" [edit=sysop:move=sysop]

2013-01-07T12:49:32Z

Protected "2k4j" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:49, 7 January 2013