2kct - Revision history

OCA at 06:45, 1 May 2024

2024-05-01T06:45:09Z

←Older revision		Revision as of 06:45, 1 May 2024
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	==Solution nmr structure of the ob-fold domain of heme chaperone ccme from desulfovibrio vulgaris. northeast structural genomics target dvr115g.==		==Solution nmr structure of the ob-fold domain of heme chaperone ccme from desulfovibrio vulgaris. northeast structural genomics target dvr115g.==
-	<StructureSection load='2kct' size='340' side='right'caption='[[2kct~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='2kct' size='340' side='right'caption='[[2kct]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Desvh Desvh~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KCT FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._Hildenborough Desulfovibrio vulgaris str. Hildenborough]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KCT FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>ccmE, DVU_1051 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~882 DESVH])~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kct OCA], [https://pdbe.org/2kct PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kct RCSB], [https://www.ebi.ac.uk/pdbsum/2kct PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kct ProSAT], [https://www.topsan.org/Proteins/NESGC/2kct TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kct OCA], [https://pdbe.org/2kct PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kct RCSB], [https://www.ebi.ac.uk/pdbsum/2kct PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kct ProSAT], [https://www.topsan.org/Proteins/NESGC/2kct TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/Q72D78_DESVH Q72D78_DESVH]] Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (By similarity).[SAAS:SAAS004329_004_022790]	+	[https://www.uniprot.org/uniprot/Q72D78_DESVH Q72D78_DESVH] Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (By similarity).[SAAS:SAAS004329_004_022790]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Desvh~~]]	+	[[Category: Desulfovibrio vulgaris str. Hildenborough]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Acton~~, T B~~]]	+	[[Category: Acton TB]]
-	[[Category: Aramini~~, J M~~]]	+	[[Category: Aramini JM]]
-	[[Category: Everett~~, J K~~]]	+	[[Category: Everett JK]]
-	[[Category: Foote~~, E L~~]]	+	[[Category: Foote EL]]
-	[[Category: Jiang, M]]	+	[[Category: Jiang M]]
-	[[Category: Lee, H]]	+	[[Category: Lee H]]
-	[[Category: Lemak, A]]	+	[[Category: Lemak A]]
-	[[Category: Montelione~~, G T]]~~	+	[[Category: Montelione GT]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Nair R]]
-	[[Category: Nair, R]]	+	[[Category: Rossi P]]
-	[[Category: Rossi, P]]	+	[[Category: Rost B]]
-	[[Category: Rost, B]]	+	[[Category: Swapna GVT]]
-	[[Category: Swapna~~, G V.T~~]]	+	[[Category: Wang H]]
-	[[Category: Wang, H]]	+	[[Category: Xiao R]]
-	[[Category: Xiao, R]]	+
-	~~[[Category: Biosynthetic protein]]~~	+
-	~~[[Category: Chaperone]]~~	+
-	~~[[Category: Cytochrome c biogenesis]]~~	+
-	~~[[Category: Heme chaperone]]~~	+
-	~~[[Category: Nesg]]~~	+
-	~~[[Category: Ob-fold domain]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Solution nmr structure~~]]	+

OCA at 20:47, 20 October 2021

2021-10-20T20:47:05Z

←Older revision		Revision as of 20:47, 20 October 2021
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	<StructureSection load='2kct' size='340' side='right'caption='[[2kct]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2kct' size='340' side='right'caption='[[2kct]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Desvh Desvh]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2KCT FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desvh Desvh]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KCT FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmE, DVU_1051 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=882 DESVH])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmE, DVU_1051 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=882 DESVH])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2kct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kct OCA], [~~http~~://pdbe.org/2kct PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2kct RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2kct PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2kct ProSAT], [~~http~~://www.topsan.org/Proteins/NESGC/2kct TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kct OCA], [https://pdbe.org/2kct PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kct RCSB], [https://www.ebi.ac.uk/pdbsum/2kct PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kct ProSAT], [https://www.topsan.org/Proteins/NESGC/2kct TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/Q72D78_DESVH Q72D78_DESVH]] Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (By similarity).[SAAS:SAAS004329_004_022790]	+	[[https://www.uniprot.org/uniprot/Q72D78_DESVH Q72D78_DESVH]] Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (By similarity).[SAAS:SAAS004329_004_022790]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 07:07, 6 November 2019

2019-11-06T07:07:07Z

←Older revision		Revision as of 07:07, 6 November 2019
Line 1:		Line 1:

	==Solution nmr structure of the ob-fold domain of heme chaperone ccme from desulfovibrio vulgaris. northeast structural genomics target dvr115g.==		==Solution nmr structure of the ob-fold domain of heme chaperone ccme from desulfovibrio vulgaris. northeast structural genomics target dvr115g.==
-	<StructureSection load='2kct' size='340' side='right' caption='[[2kct]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='2kct' size='340' side='right'caption='[[2kct]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desvh Desvh]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KCT FirstGlance]. <br>		<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desvh Desvh]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KCT FirstGlance]. <br>
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Desvh]]		[[Category: Desvh]]
		+	[[Category: Large Structures]]
	[[Category: Acton, T B]]		[[Category: Acton, T B]]
	[[Category: Aramini, J M]]		[[Category: Aramini, J M]]

OCA at 10:23, 18 July 2018

2018-07-18T10:23:40Z

←Older revision		Revision as of 10:23, 18 July 2018
Line 1:		Line 1:
		+
	==Solution nmr structure of the ob-fold domain of heme chaperone ccme from desulfovibrio vulgaris. northeast structural genomics target dvr115g.==		==Solution nmr structure of the ob-fold domain of heme chaperone ccme from desulfovibrio vulgaris. northeast structural genomics target dvr115g.==
	<StructureSection load='2kct' size='340' side='right' caption='[[2kct]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2kct' size='340' side='right' caption='[[2kct]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desvh Desvh]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KCT FirstGlance]. <br>		<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desvh Desvh]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KCT FirstGlance]. <br>
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmE, DVU_1051 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=882 DESVH])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmE, DVU_1051 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=882 DESVH])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kct OCA], [http://pdbe.org/2kct PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kct RCSB], [http://www.ebi.ac.uk/pdbsum/2kct PDBsum], [http://www.topsan.org/Proteins/NESGC/2kct TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kct OCA], [http://pdbe.org/2kct PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kct RCSB], [http://www.ebi.ac.uk/pdbsum/2kct PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2kct ProSAT], [http://www.topsan.org/Proteins/NESGC/2kct TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kc/2kct_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kc/2kct_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 03:57, 8 February 2016

2016-02-08T03:57:43Z

←Older revision		Revision as of 03:57, 8 February 2016
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kct ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 07:38, 10 September 2015

2015-09-10T07:38:03Z

←Older revision		Revision as of 07:38, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2kct' size='340' side='right' caption='[[2kct]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2kct' size='340' side='right' caption='[[2kct]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Desulfovibrio_vulgaris_str._hildenborough Desulfovibrio vulgaris str. hildenborough~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KCT FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desvh Desvh]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KCT FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmE, DVU_1051 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=882 ~~Desulfovibrio vulgaris str. Hildenborough~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmE, DVU_1051 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=882 DESVH])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kct OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kct RCSB], [http://www.ebi.ac.uk/pdbsum/2kct PDBsum], [http://www.topsan.org/Proteins/NESGC/2kct TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kct OCA], [http://pdbe.org/2kct PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kct RCSB], [http://www.ebi.ac.uk/pdbsum/2kct PDBsum], [http://www.topsan.org/Proteins/NESGC/2kct TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 20:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Desulfovibrio vulgaris str. hildenborough~~]]	+	[[Category: Desvh]]
	[[Category: Acton, T B]]		[[Category: Acton, T B]]
	[[Category: Aramini, J M]]		[[Category: Aramini, J M]]

OCA at 20:25, 24 December 2014

2014-12-24T20:25:50Z

←Older revision		Revision as of 20:25, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._hildenborough Desulfovibrio vulgaris str. hildenborough]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KCT FirstGlance]. <br>		<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._hildenborough Desulfovibrio vulgaris str. hildenborough]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KCT FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmE, DVU_1051 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=882 Desulfovibrio vulgaris str. Hildenborough])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmE, DVU_1051 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=882 Desulfovibrio vulgaris str. Hildenborough])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kct OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kct RCSB], [http://www.ebi.ac.uk/pdbsum/2kct PDBsum], [http://www.topsan.org/Proteins/NESGC/2kct TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kct OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kct RCSB], [http://www.ebi.ac.uk/pdbsum/2kct PDBsum], [http://www.topsan.org/Proteins/NESGC/2kct TOPSAN]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/Q72D78_DESVH Q72D78_DESVH]] Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (By similarity).[SAAS:SAAS004329_004_022790]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Desulfovibrio vulgaris str. hildenborough]]		[[Category: Desulfovibrio vulgaris str. hildenborough]]
-	[[Category: Acton, T B.]]	+	[[Category: Acton, T B]]
-	[[Category: Aramini, J M.]]	+	[[Category: Aramini, J M]]
-	[[Category: Everett, J K.]]	+	[[Category: Everett, J K]]
-	[[Category: Foote, E L.]]	+	[[Category: Foote, E L]]
-	[[Category: Jiang, M.]]	+	[[Category: Jiang, M]]
-	[[Category: Lee, H.]]	+	[[Category: Lee, H]]
-	[[Category: Lemak, A.]]	+	[[Category: Lemak, A]]
-	[[Category: Montelione, G T.]]	+	[[Category: Montelione, G T]]
-	[[Category: ~~NESG, Northeast~~ Structural ~~Genomics Consortium.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Nair, R.]]	+	[[Category: Nair, R]]
-	[[Category: Rossi, P.]]	+	[[Category: Rossi, P]]
-	[[Category: Rost, B.]]	+	[[Category: Rost, B]]
-	[[Category: Swapna, G V.T.]]	+	[[Category: Swapna, G V.T]]
-	[[Category: Wang, H.]]	+	[[Category: Wang, H]]
-	[[Category: Xiao, R.]]	+	[[Category: Xiao, R]]
	[[Category: Biosynthetic protein]]		[[Category: Biosynthetic protein]]
	[[Category: Chaperone]]		[[Category: Chaperone]]
Line 39:		Line 41:
	[[Category: Heme chaperone]]		[[Category: Heme chaperone]]
	[[Category: Nesg]]		[[Category: Nesg]]
-	[[Category: Northeast structural genomics consortium]]
	[[Category: Ob-fold domain]]		[[Category: Ob-fold domain]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category: Psi-2~~]]	+
	[[Category: Solution nmr structure]]		[[Category: Solution nmr structure]]
-	[[Category: Structural genomic]]

OCA at 08:34, 30 September 2014

2014-09-30T08:34:49Z

←Older revision		Revision as of 08:34, 30 September 2014
Line 1:		Line 1:
-	~~[[Image:2kct.png\|left\|200px]]~~	+	==Solution nmr structure of the ob-fold domain of heme chaperone ccme from desulfovibrio vulgaris. northeast structural genomics target dvr115g.==
-		+	<StructureSection load='2kct' size='340' side='right' caption='[[2kct]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
-	~~{{STRUCTURE_2kct\| PDB=2kct \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2kct]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._hildenborough Desulfovibrio vulgaris str. hildenborough]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KCT FirstGlance]. <br>
-	===Solution nmr structure of the ob-fold domain of heme chaperone ccme from desulfovibrio vulgaris. northeast structural genomics target dvr115g.===	+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ccmE, DVU_1051 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=882 Desulfovibrio vulgaris str. Hildenborough])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kct FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kct OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kct RCSB], [http://www.ebi.ac.uk/pdbsum/2kct PDBsum], [http://www.topsan.org/Proteins/NESGC/2kct TOPSAN]</span></td></tr>
-		+	<table>
-	==~~About this Structure~~==	+	== Evolutionary Conservation ==
-	[[2kct]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._hildenborough Desulfovibrio vulgaris str. hildenborough]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA].	+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kc/2kct_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Desulfovibrio vulgaris str. hildenborough]]		[[Category: Desulfovibrio vulgaris str. hildenborough]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]

OCA: Protected "2kct" [edit=sysop:move=sysop]

2013-01-07T13:34:16Z

Protected "2kct" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:34, 7 January 2013

OCA at 13:34, 7 January 2013

2013-01-07T13:34:06Z

←Older revision		Revision as of 13:34, 7 January 2013
Line 1:		Line 1:
-	~~{{Seed}}~~	+	[[Image:2kct.png\|left\|200px]]
-	[[Image:2kct.~~jpg~~\|left\|200px]]	+

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2kct", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2kct\| PDB=2kct \| SCENE= }}		{{STRUCTURE_2kct\| PDB=2kct \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~2KCT~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._hildenborough Desulfovibrio vulgaris str. hildenborough]. Full ~~crystallographic~~ information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA].	+	[[2kct]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris_str._hildenborough Desulfovibrio vulgaris str. hildenborough]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KCT OCA].
	[[Category: Desulfovibrio vulgaris str. hildenborough]]		[[Category: Desulfovibrio vulgaris str. hildenborough]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]
Line 32:		Line 25:
	[[Category: Xiao, R.]]		[[Category: Xiao, R.]]
	[[Category: Biosynthetic protein]]		[[Category: Biosynthetic protein]]
		+	[[Category: Chaperone]]
	[[Category: Cytochrome c biogenesis]]		[[Category: Cytochrome c biogenesis]]
	[[Category: Heme chaperone]]		[[Category: Heme chaperone]]
Line 41:		Line 35:
	[[Category: Solution nmr structure]]		[[Category: Solution nmr structure]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 11 12:35:26 2009''