2kei - Revision history

OCA at 08:19, 7 April 2021

2021-04-07T08:19:19Z

←Older revision		Revision as of 08:19, 7 April 2021
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	==Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1==		==Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1==
-	<StructureSection load='2kei' size='340' side='right' caption='[[2kei]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='2kei' size='340' side='right'caption='[[2kei]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2kei]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2KEI FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2kei]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KEI FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1l1m\|1l1m]], [[2kek\|2kek]], [[2kej\|2kej]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1l1m\|1l1m]], [[2kek\|2kek]], [[2kej\|2kej]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lacI, b0345, JW0336 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lacI, b0345, JW0336 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2kei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kei OCA], [~~http~~://pdbe.org/2kei PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2kei RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2kei PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2kei ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kei OCA], [https://pdbe.org/2kei PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kei RCSB], [https://www.ebi.ac.uk/pdbsum/2kei PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kei ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/LACI_ECOLI LACI_ECOLI]] Repressor of the lactose operon. Binds allolactose as an inducer.	+	[[https://www.uniprot.org/uniprot/LACI_ECOLI LACI_ECOLI]] Repressor of the lactose operon. Binds allolactose as an inducer.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Ecoli]]		[[Category: Ecoli]]
		+	[[Category: Large Structures]]
	[[Category: Biris, N]]		[[Category: Biris, N]]
	[[Category: Boelens, R]]		[[Category: Boelens, R]]

OCA at 11:21, 18 July 2018

2018-07-18T11:21:08Z

←Older revision		Revision as of 11:21, 18 July 2018
Line 1:		Line 1:
		+
	==Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1==		==Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1==
	<StructureSection load='2kei' size='340' side='right' caption='[[2kei]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2kei' size='340' side='right' caption='[[2kei]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1l1m\|1l1m]], [[2kek\|2kek]], [[2kej\|2kej]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1l1m\|1l1m]], [[2kek\|2kek]], [[2kej\|2kej]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lacI, b0345, JW0336 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lacI, b0345, JW0336 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kei OCA], [http://pdbe.org/2kei PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kei RCSB], [http://www.ebi.ac.uk/pdbsum/2kei PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kei OCA], [http://pdbe.org/2kei PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kei RCSB], [http://www.ebi.ac.uk/pdbsum/2kei PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2kei ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ke/2kei_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ke/2kei_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 30:		Line 31:

	==See Also==		==See Also==
-	*[[Lac repressor ~~3D structures~~\|Lac repressor ~~3D structures~~]]	+	*[[Lac repressor\|Lac repressor]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 09:55, 7 February 2016

2016-02-07T09:55:48Z

←Older revision		Revision as of 09:55, 7 February 2016
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kei ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 00:20, 10 September 2015

2015-09-10T00:20:20Z

←Older revision		Revision as of 00:20, 10 September 2015
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	<StructureSection load='2kei' size='340' side='right' caption='[[2kei]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2kei' size='340' side='right' caption='[[2kei]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2kei]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia coli~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KEI FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2kei]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KEI FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1l1m\|1l1m]], [[2kek\|2kek]], [[2kej\|2kej]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1l1m\|1l1m]], [[2kek\|2kek]], [[2kej\|2kej]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lacI, b0345, JW0336 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~562 Escherichia coli~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lacI, b0345, JW0336 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kei OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kei RCSB], [http://www.ebi.ac.uk/pdbsum/2kei PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kei OCA], [http://pdbe.org/2kei PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kei RCSB], [http://www.ebi.ac.uk/pdbsum/2kei PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 27:		Line 27:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2kei" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 34:		Line 35:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia coli~~]]	+	[[Category: Ecoli]]
	[[Category: Biris, N]]		[[Category: Biris, N]]
	[[Category: Boelens, R]]		[[Category: Boelens, R]]

OCA at 14:14, 24 December 2014

2014-12-24T14:14:11Z

←Older revision		Revision as of 14:14, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2kei]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KEI FirstGlance]. <br>		<table><tr><td colspan='2'>[[2kei]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KEI FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1l1m\|1l1m]], [[2kek\|2kek]], [[2kej\|2kej]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1l1m\|1l1m]], [[2kek\|2kek]], [[2kej\|2kej]]</td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lacI, b0345, JW0336 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lacI, b0345, JW0336 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kei OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kei RCSB], [http://www.ebi.ac.uk/pdbsum/2kei PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kei OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kei RCSB], [http://www.ebi.ac.uk/pdbsum/2kei PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/LACI_ECOLI LACI_ECOLI]] Repressor of the lactose operon. Binds allolactose as an inducer.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Biris, N.]]	+	[[Category: Biris, N]]
-	[[Category: Boelens, R.]]	+	[[Category: Boelens, R]]
-	[[Category: Folkers, G.]]	+	[[Category: Folkers, G]]
-	[[Category: Kaptein, R.]]	+	[[Category: Kaptein, R]]
-	[[Category: Romanuka, J.]]	+	[[Category: Romanuka, J]]
-	[[Category: Tishchenko, E.]]	+	[[Category: Tishchenko, E]]
-	[[Category: Wienk, H.]]	+	[[Category: Wienk, H]]
	[[Category: Dna-binding]]		[[Category: Dna-binding]]
	[[Category: Lac operator]]		[[Category: Lac operator]]

OCA at 04:20, 29 September 2014

2014-09-29T04:20:37Z

←Older revision		Revision as of 04:20, 29 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2kei.~~png~~\|~~left~~\|200px]]	+	==Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1==
		+	<StructureSection load='2kei' size='340' side='right' caption='[[2kei]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2kei]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KEI FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1l1m\|1l1m]], [[2kek\|2kek]], [[2kej\|2kej]]</td></tr>
		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">lacI, b0345, JW0336 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kei FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kei OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2kei RCSB], [http://www.ebi.ac.uk/pdbsum/2kei PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ke/2kei_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The structures of a dimeric mutant of the Lac repressor DNA-binding domain complexed with the auxiliary operators O2 and O3 have been determined using NMR spectroscopy and compared to the structures of the previously determined Lac-O1 and Lac-nonoperator complexes. Structural analysis of the Lac-O1 and Lac-O2 complexes shows highly similar structures with very similar numbers of specific and nonspecific contacts, in agreement with similar affinities for these two operators. The left monomer of the Lac repressor in the Lac-O3 complex retains most of these specific contacts. However, in the right half-site of the O3 operator, there is a significant loss of protein-DNA contacts, explaining the low affinity of the Lac repressor for the O3 operator. The binding mode in the right half-site resembles that of the nonspecific complex. In contrast to the Lac-nonoperator DNA complex where no hinge helices are formed, the stability of the hinge helices in the weak Lac-O3 complex is the same as in the Lac-O1 and Lac-O2 complexes, as judged from the results of hydrogen/deuterium experiments.

-	~~{{STRUCTURE_2kei\| PDB=2kei \| SCENE= }}~~	+	Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.,Romanuka J, Folkers GE, Biris N, Tishchenko E, Wienk H, Bonvin AM, Kaptein R, Boelens R J Mol Biol. 2009 Jul 17;390(3):478-89. Epub 2009 May 18. PMID:19450607<ref>PMID:19450607</ref>

-	~~===Refined Solution Structure of~~ a ~~Dimer~~ of ~~LAC repressor DNA-Binding domain complexed to its natural operator O1===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_19450607}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[2kei]] is a 4 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Escherichia_coli Escherichia coli]~~. ~~Full experimental information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA].~~	+

	==See Also==		==See Also==
-	*[[Lac repressor\|Lac repressor]]	+	*[[Lac repressor 3D structures\|Lac repressor 3D structures]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:019450607<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Biris, N.]]		[[Category: Biris, N.]]

OCA at 06:18, 20 October 2012

2012-10-20T06:18:08Z

←Older revision		Revision as of 06:18, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[2kei]] is a 4 chain structure ~~of [[Lac repressor]]~~ with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA].	+	[[2kei]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA].

	==See Also==		==See Also==

OCA: Protected "2kei" [edit=sysop:move=sysop]

2012-07-25T12:45:24Z

Protected "2kei" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:45, 25 July 2012

OCA at 12:45, 25 July 2012

2012-07-25T12:45:23Z

←Older revision		Revision as of 12:45, 25 July 2012
Line 1:		Line 1:
-	{{Seed}}
	[[Image:2kei.png\|left\|200px]]		[[Image:2kei.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2kei", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2kei\| PDB=2kei \| SCENE= }}		{{STRUCTURE_2kei\| PDB=2kei \| SCENE= }}

	===Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1===		===Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1===

		+	{{ABSTRACT_PUBMED_19450607}}

	==About this Structure==		==About this Structure==
-	~~2KEI~~ is a 4 ~~chains~~ structure of ~~sequences~~ from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA].	+	[[2kei]] is a 4 chain structure of [[Lac repressor]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA].
		+
		+	==See Also==
		+	*[[Lac repressor\|Lac repressor]]
		+
		+	==Reference==
		+	<ref group="xtra">PMID:019450607</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Biris, N.]]		[[Category: Biris, N.]]
Line 26:		Line 26:
	[[Category: Lac operator]]		[[Category: Lac operator]]
	[[Category: Lac repressor]]		[[Category: Lac repressor]]
-	[[Category: Nmr]]
	[[Category: Protein-dna complex]]		[[Category: Protein-dna complex]]
	[[Category: Repressor]]		[[Category: Repressor]]
	[[Category: Transcription]]		[[Category: Transcription]]
	[[Category: Transcription regulation]]		[[Category: Transcription regulation]]
-	[[Category: Transcription/dna complex]]	+	[[Category: Transcription-dna complex]]
-		+
-	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 8 20:13:20 2009''~~	+

OCA at 17:08, 8 July 2009

2009-07-08T17:08:15Z

←Older revision		Revision as of 17:08, 8 July 2009
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	===Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1===		===Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_19450607}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 19450607 is the PubMed ID number.
-	-->
-	{{ABSTRACT_PUBMED_19450607}}

	==About this Structure==		==About this Structure==
	2KEI is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA].		2KEI is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KEI OCA].
-
-	==Reference==
-	<ref group="xtra">PMID:19450607</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Biris, N.]]		[[Category: Biris, N.]]
Line 42:		Line 33:
	[[Category: Transcription/dna complex]]		[[Category: Transcription/dna complex]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 8 09:33:52 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 8 20:13:20 2009''