2lgz - Revision history

OCA at 05:43, 15 May 2024

2024-05-15T05:43:36Z

←Older revision		Revision as of 05:43, 15 May 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2lgz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LGZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2lgz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LGZ FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [https://pdbe.org/2lgz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [https://www.ebi.ac.uk/pdbsum/2lgz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lgz ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [https://pdbe.org/2lgz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [https://www.ebi.ac.uk/pdbsum/2lgz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lgz ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 08:59, 14 June 2023

2023-06-14T08:59:47Z

←Older revision		Revision as of 08:59, 14 June 2023
Line 17:		Line 17:
	</div>		</div>
	<div class="pdbe-citations 2lgz" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 2lgz" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Glycosyltransferase 3D structures\|Glycosyltransferase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 11:00, 15 February 2023

2023-02-15T11:00:06Z

←Older revision		Revision as of 11:00, 15 February 2023
Line 1:		Line 1:

	==Solution structure of STT3P==		==Solution structure of STT3P==
-	<StructureSection load='2lgz' size='340' side='right'caption='[[2lgz~~]], [[NMR_Ensembles_of_Models \| 10 NMR models~~]]' scene=''>	+	<StructureSection load='2lgz' size='340' side='right'caption='[[2lgz]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2lgz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Baker's_yeast Baker's yeast~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LGZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2lgz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LGZ FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STT3, YGL022W ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [https://pdbe.org/2lgz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [https://www.ebi.ac.uk/pdbsum/2lgz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lgz ProSAT]</span></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Dolichyl-diphosphooligosaccharide--protein_glycotransferase Dolichyl-diphosphooligosaccharide--protein glycotransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.99.18 2.4.99.18] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [https://pdbe.org/2lgz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [https://www.ebi.ac.uk/pdbsum/2lgz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lgz ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/STT3_YEAST STT3_YEAST]] Catalytic subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.<ref>PMID:12359722</ref>	+	[https://www.uniprot.org/uniprot/STT3_YEAST STT3_YEAST] Catalytic subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.<ref>PMID:12359722</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 23:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Baker's yeast]]
-	[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Bhaskaran, R~~]]	+	[[Category: Saccharomyces cerevisiae S288C]]
-	[[Category: ~~Huang, C~~]]	+	[[Category: Bhaskaran R]]
-	[[Category: ~~Mohanty, S~~]]	+	[[Category: Huang C]]
-	[[Category: ~~Catalytic domain]]~~	+	[[Category: Mohanty S]]
-	~~[[Category: Membrane protein]]~~	+
-	~~[[Category: Oligosaccharyl transferase]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 10:10, 12 May 2021

2021-05-12T10:10:46Z

←Older revision		Revision as of 10:10, 12 May 2021
Line 1:		Line 1:

	==Solution structure of STT3P==		==Solution structure of STT3P==
-	<StructureSection load='2lgz' size='340' side='right' caption='[[2lgz]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>	+	<StructureSection load='2lgz' size='340' side='right'caption='[[2lgz]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2lgz]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2LGZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2lgz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LGZ FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STT3, YGL022W ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STT3, YGL022W ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Dolichyl-diphosphooligosaccharide--protein_glycotransferase Dolichyl-diphosphooligosaccharide--protein glycotransferase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.99.18 2.4.99.18] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Dolichyl-diphosphooligosaccharide--protein_glycotransferase Dolichyl-diphosphooligosaccharide--protein glycotransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.99.18 2.4.99.18] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [~~http~~://pdbe.org/2lgz PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2lgz PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2lgz ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [https://pdbe.org/2lgz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [https://www.ebi.ac.uk/pdbsum/2lgz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lgz ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/STT3_YEAST STT3_YEAST]] Catalytic subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.<ref>PMID:12359722</ref>	+	[[https://www.uniprot.org/uniprot/STT3_YEAST STT3_YEAST]] Catalytic subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.<ref>PMID:12359722</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 25:		Line 25:
	[[Category: Baker's yeast]]		[[Category: Baker's yeast]]
	[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]		[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]
		+	[[Category: Large Structures]]
	[[Category: Bhaskaran, R]]		[[Category: Bhaskaran, R]]
	[[Category: Huang, C]]		[[Category: Huang, C]]

OCA at 19:59, 1 August 2018

2018-08-01T19:59:20Z

←Older revision		Revision as of 19:59, 1 August 2018
Line 1:		Line 1:
		+
	==Solution structure of STT3P==		==Solution structure of STT3P==
	<StructureSection load='2lgz' size='340' side='right' caption='[[2lgz]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>		<StructureSection load='2lgz' size='340' side='right' caption='[[2lgz]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STT3, YGL022W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STT3, YGL022W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dolichyl-diphosphooligosaccharide--protein_glycotransferase Dolichyl-diphosphooligosaccharide--protein glycotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.99.18 2.4.99.18] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dolichyl-diphosphooligosaccharide--protein_glycotransferase Dolichyl-diphosphooligosaccharide--protein glycotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.99.18 2.4.99.18] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [http://pdbe.org/2lgz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [http://www.ebi.ac.uk/pdbsum/2lgz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [http://pdbe.org/2lgz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [http://www.ebi.ac.uk/pdbsum/2lgz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2lgz ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 06:27, 11 September 2015

2015-09-11T06:27:15Z

←Older revision		Revision as of 06:27, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2lgz' size='340' side='right' caption='[[2lgz]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>		<StructureSection load='2lgz' size='340' side='right' caption='[[2lgz]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2lgz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LGZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2lgz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LGZ FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STT3, YGL022W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 ~~Saccharomyces cerevisiae S288c~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STT3, YGL022W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dolichyl-diphosphooligosaccharide--protein_glycotransferase Dolichyl-diphosphooligosaccharide--protein glycotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.~~119~~ 2.4.1.~~119~~] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dolichyl-diphosphooligosaccharide--protein_glycotransferase Dolichyl-diphosphooligosaccharide--protein glycotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.99.18 2.4.99.18] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [http://www.ebi.ac.uk/pdbsum/2lgz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [http://pdbe.org/2lgz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [http://www.ebi.ac.uk/pdbsum/2lgz PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2lgz" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Baker's yeast]]
	[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]		[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]
-	[[Category: Saccharomyces cerevisiae s288c]]
	[[Category: Bhaskaran, R]]		[[Category: Bhaskaran, R]]
	[[Category: Huang, C]]		[[Category: Huang, C]]

OCA at 12:34, 25 December 2014

2014-12-25T12:34:05Z

←Older revision		Revision as of 12:34, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2lgz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LGZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[2lgz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LGZ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STT3, YGL022W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Saccharomyces cerevisiae S288c])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STT3, YGL022W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Saccharomyces cerevisiae S288c])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dolichyl-diphosphooligosaccharide--protein_glycotransferase Dolichyl-diphosphooligosaccharide--protein glycotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.119 2.4.1.119] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dolichyl-diphosphooligosaccharide--protein_glycotransferase Dolichyl-diphosphooligosaccharide--protein glycotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.119 2.4.1.119] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [http://www.ebi.ac.uk/pdbsum/2lgz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [http://www.ebi.ac.uk/pdbsum/2lgz PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/STT3_YEAST STT3_YEAST]] Catalytic subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). All subunits are required for a maximal enzyme activity.<ref>PMID:12359722</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 21:		Line 23:
	[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]		[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]
	[[Category: Saccharomyces cerevisiae s288c]]		[[Category: Saccharomyces cerevisiae s288c]]
-	[[Category: Bhaskaran, R.]]	+	[[Category: Bhaskaran, R]]
-	[[Category: Huang, C.]]	+	[[Category: Huang, C]]
-	[[Category: Mohanty, S.]]	+	[[Category: Mohanty, S]]
	[[Category: Catalytic domain]]		[[Category: Catalytic domain]]
	[[Category: Membrane protein]]		[[Category: Membrane protein]]
	[[Category: Oligosaccharyl transferase]]		[[Category: Oligosaccharyl transferase]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 03:42, 29 September 2014

2014-09-29T03:42:22Z

←Older revision		Revision as of 03:42, 29 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2lgz.~~png~~\|~~left\|200px~~]]	+	==Solution structure of STT3P==
		+	<StructureSection load='2lgz' size='340' side='right' caption='[[2lgz]], [[NMR_Ensembles_of_Models \| 10 NMR models]]' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2lgz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LGZ FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STT3, YGL022W ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Saccharomyces cerevisiae S288c])</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dolichyl-diphosphooligosaccharide--protein_glycotransferase Dolichyl-diphosphooligosaccharide--protein glycotransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.119 2.4.1.119] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lgz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2lgz RCSB], [http://www.ebi.ac.uk/pdbsum/2lgz PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	N-Glycosylation is an essential and highly conserved protein modification. In eukaryotes, it is catalyzed by a multisubunit membrane-associated enzyme, oligosaccharyltransferase (OT). We report the high resolution structure of the C-terminal domain of eukaryotic Stt3p. Unlike its soluble beta-sheet-rich prokaryotic counterparts, our model reveals that the C-terminal domain of yeast Stt3p is highly helical and has an overall oblate spheroid-shaped structure containing a membrane-embedded region. Anchoring of this protein segment to the endoplasmic reticulum membrane is likely to bring the membrane-embedded donor substrate closer, thus facilitating glycosylation efficiency. Structural comparison of the region near the WWDYG signature motif revealed that the acceptor substrate-binding site of yeast OT strikingly resembles its prokaryotic counterparts, suggesting a conserved mechanism of N-glycosylation from prokaryotes to eukaryotes. Furthermore, comparison of the NMR and cryo-EM structures of yeast OT revealed that the molecular architecture of this acceptor substrate-recognizing domain has interesting spatial specificity for interactions with other essential OT subunits.

-	~~{{STRUCTURE_2lgz\| PDB=2lgz \| SCENE= }}~~	+	Eukaryotic N-Glycosylation Occurs via the Membrane-anchored C-terminal Domain of the Stt3p Subunit of Oligosaccharyltransferase.,Huang C, Bhaskaran R, Mohanty S J Biol Chem. 2012 Sep 21;287(39):32450-8. Epub 2012 Aug 3. PMID:22865878<ref>PMID:22865878</ref>

-	~~===Solution structure~~ of ~~STT3P===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_22865878}}~~	+	== References ==
-		+	<references/>
-	==~~About this Structure~~==	+	__TOC__
-	~~[[2lgz]] is a 1 chain structure with sequence from [http:~~//~~en.wikipedia.org/wiki/Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA].~~	+	</StructureSection>
	[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]		[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]
	[[Category: Saccharomyces cerevisiae s288c]]		[[Category: Saccharomyces cerevisiae s288c]]

OCA at 16:07, 28 November 2012

2012-11-28T16:07:29Z

←Older revision		Revision as of 16:07, 28 November 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[2lgz]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA].	+	[[2lgz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA].
	[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]		[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]
		+	[[Category: Saccharomyces cerevisiae s288c]]
	[[Category: Bhaskaran, R.]]		[[Category: Bhaskaran, R.]]
	[[Category: Huang, C.]]		[[Category: Huang, C.]]

OCA at 06:17, 10 October 2012

2012-10-10T06:17:02Z

←Older revision		Revision as of 06:17, 10 October 2012
Line 1:		Line 1:
-	[[Image:2lgz.~~jpg~~\|left\|200px]]	+	[[Image:2lgz.png\|left\|200px]]

	{{STRUCTURE_2lgz\| PDB=2lgz \| SCENE= }}		{{STRUCTURE_2lgz\| PDB=2lgz \| SCENE= }}
Line 5:		Line 5:
	===Solution structure of STT3P===		===Solution structure of STT3P===

		+	{{ABSTRACT_PUBMED_22865878}}

	==About this Structure==		==About this Structure==
-	[[2lgz]] is a 1 chain structure ~~with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]~~. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA].	+	[[2lgz]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LGZ OCA].
	[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]		[[Category: Dolichyl-diphosphooligosaccharide--protein glycotransferase]]
-	[[Category: Saccharomyces cerevisiae]]
	[[Category: Bhaskaran, R.]]		[[Category: Bhaskaran, R.]]
	[[Category: Huang, C.]]		[[Category: Huang, C.]]