2ob5 - Revision history

OCA at 00:16, 28 December 2023

2023-12-28T00:16:31Z

←Older revision		Revision as of 00:16, 28 December 2023
Line 3:		Line 3:
	<StructureSection load='2ob5' size='340' side='right'caption='[[2ob5]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='2ob5' size='340' side='right'caption='[[2ob5]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ob5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Agrfc Agrfc~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OB5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ob5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OB5 FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=MSE:SELENOMETHIONINE'>MSE</scene~~></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.6Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~AGR_C_3656, Atu2016 ([https~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [https://pdbe.org/2ob5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ob5 ProSAT], [https://www.topsan.org/Proteins/MCSG/2ob5 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [https://pdbe.org/2ob5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ob5 ProSAT], [https://www.topsan.org/Proteins/MCSG/2ob5 TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A9CIE0_AGRFC A9CIE0_AGRFC]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Agrfc~~]]	+	[[Category: Agrobacterium fabrum str. C58]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Chang, C]]	+	[[Category: Chang C]]
-	[[Category: Edwards~~, A M~~]]	+	[[Category: Edwards AM]]
-	[[Category: Gu, J]]	+	[[Category: Gu J]]
-	[[Category: Joachimiak, A]]	+	[[Category: Joachimiak A]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Savchenko A]]
-	[[Category: Savchenko, A]]	+	[[Category: Xu X]]
-	[[Category: Xu, X]]	+
-	~~[[Category: Agrobacterium tumefacien]]~~	+
-	~~[[Category: Mcsg]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Putavite sugar binding protein]]~~	+
-	~~[[Category: Sugar binding protein~~]]	+

OCA at 12:51, 9 June 2021

2021-06-09T12:51:39Z

←Older revision		Revision as of 12:51, 9 June 2021
Line 1:		Line 1:

	==Crystal structure of protein Atu2016, putative sugar binding protein==		==Crystal structure of protein Atu2016, putative sugar binding protein==
-	<StructureSection load='2ob5' size='340' side='right' caption='[[2ob5]], [[Resolution\|resolution]] 1.60Å' scene=''>	+	<StructureSection load='2ob5' size='340' side='right'caption='[[2ob5]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ob5]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2OB5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ob5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OB5 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AGR_C_3656, Atu2016 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AGR_C_3656, Atu2016 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [~~http~~://pdbe.org/2ob5 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2ob5 ProSAT], [~~http~~://www.topsan.org/Proteins/MCSG/2ob5 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [https://pdbe.org/2ob5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ob5 ProSAT], [https://www.topsan.org/Proteins/MCSG/2ob5 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 21:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Agrfc]]		[[Category: Agrfc]]
		+	[[Category: Large Structures]]
	[[Category: Chang, C]]		[[Category: Chang, C]]
	[[Category: Edwards, A M]]		[[Category: Edwards, A M]]

OCA at 07:16, 22 August 2018

2018-08-22T07:16:45Z

←Older revision		Revision as of 07:16, 22 August 2018
Line 1:		Line 1:
		+
	==Crystal structure of protein Atu2016, putative sugar binding protein==		==Crystal structure of protein Atu2016, putative sugar binding protein==
	<StructureSection load='2ob5' size='340' side='right' caption='[[2ob5]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='2ob5' size='340' side='right' caption='[[2ob5]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ob5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Agrt5 Agrt5~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OB5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ob5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OB5 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AGR_C_3656, Atu2016 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 ~~AGRT5~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AGR_C_3656, Atu2016 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [http://pdbe.org/2ob5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB], [http://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [http://www.topsan.org/Proteins/MCSG/2ob5 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [http://pdbe.org/2ob5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB], [http://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ob5 ProSAT], [http://www.topsan.org/Proteins/MCSG/2ob5 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ob/2ob5_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ob/2ob5_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 19:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Agrt5~~]]	+	[[Category: Agrfc]]
	[[Category: Chang, C]]		[[Category: Chang, C]]
	[[Category: Edwards, A M]]		[[Category: Edwards, A M]]

OCA at 17:06, 8 February 2016

2016-02-08T17:06:30Z

←Older revision		Revision as of 17:06, 8 February 2016
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ob5 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 13:39, 10 September 2015

2015-09-10T13:39:56Z

←Older revision		Revision as of 13:39, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2ob5' size='340' side='right' caption='[[2ob5]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='2ob5' size='340' side='right' caption='[[2ob5]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ob5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OB5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ob5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OB5 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AGR_C_3656, Atu2016 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 ~~Agrobacterium tumefaciens str. C58~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AGR_C_3656, Atu2016 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRT5])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB], [http://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [http://www.topsan.org/Proteins/MCSG/2ob5 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [http://pdbe.org/2ob5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB], [http://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [http://www.topsan.org/Proteins/MCSG/2ob5 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Agrobacterium tumefaciens str. c58~~]]	+	[[Category: Agrt5]]
	[[Category: Chang, C]]		[[Category: Chang, C]]
	[[Category: Edwards, A M]]		[[Category: Edwards, A M]]

OCA at 13:54, 19 January 2015

2015-01-19T13:54:44Z

←Older revision		Revision as of 13:54, 19 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ob5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OB5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ob5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OB5 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AGR_C_3656, Atu2016 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 Agrobacterium tumefaciens str. C58])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AGR_C_3656, Atu2016 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 Agrobacterium tumefaciens str. C58])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB], [http://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [http://www.topsan.org/Proteins/MCSG/2ob5 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB], [http://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [http://www.topsan.org/Proteins/MCSG/2ob5 TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Agrobacterium tumefaciens str. c58]]		[[Category: Agrobacterium tumefaciens str. c58]]
-	[[Category: Chang, C.]]	+	[[Category: Chang, C]]
-	[[Category: Edwards, A M.]]	+	[[Category: Edwards, A M]]
-	[[Category: Gu, J.]]	+	[[Category: Gu, J]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Savchenko, A.]]	+	[[Category: Savchenko, A]]
-	[[Category: Xu, X.]]	+	[[Category: Xu, X]]
	[[Category: Agrobacterium tumefacien]]		[[Category: Agrobacterium tumefacien]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
-	[[Category: ~~Midwest center for structural genomic]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
-	~~[[Category: Psi-2~~]]	+
	[[Category: Putavite sugar binding protein]]		[[Category: Putavite sugar binding protein]]
-	[[Category: Structural genomic]]
	[[Category: Sugar binding protein]]		[[Category: Sugar binding protein]]

OCA at 18:19, 30 September 2014

2014-09-30T18:19:34Z

←Older revision		Revision as of 18:19, 30 September 2014
Line 1:		Line 1:
-	~~[[Image:2ob5.png\|left\|200px]]~~	+	==Crystal structure of protein Atu2016, putative sugar binding protein==
-		+	<StructureSection load='2ob5' size='340' side='right' caption='[[2ob5]], [[Resolution\|resolution]] 1.60Å' scene=''>
-	~~{{STRUCTURE_2ob5\| PDB=2ob5 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2ob5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OB5 FirstGlance]. <br>
-	===Crystal structure of protein Atu2016, putative sugar binding protein===	+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AGR_C_3656, Atu2016 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 Agrobacterium tumefaciens str. C58])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ob5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ob5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ob5 RCSB], [http://www.ebi.ac.uk/pdbsum/2ob5 PDBsum], [http://www.topsan.org/Proteins/MCSG/2ob5 TOPSAN]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[2ob5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ob/2ob5_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Agrobacterium tumefaciens str. c58]]		[[Category: Agrobacterium tumefaciens str. c58]]
	[[Category: Chang, C.]]		[[Category: Chang, C.]]

OCA: Protected "2ob5" [edit=sysop:move=sysop]

2013-01-07T13:10:52Z

Protected "2ob5" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:10, 7 January 2013

OCA at 13:10, 7 January 2013

2013-01-07T13:10:48Z

←Older revision		Revision as of 13:10, 7 January 2013
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-	{{Seed}}
	[[Image:2ob5.png\|left\|200px]]		[[Image:2ob5.png\|left\|200px]]

-	<!--
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	{{STRUCTURE_2ob5\| PDB=2ob5 \| SCENE= }}		{{STRUCTURE_2ob5\| PDB=2ob5 \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2OB5~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/~~Agrobacterium_tumefaciens~~ Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA].	+	[[2ob5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA].
-	[[Category: Agrobacterium tumefaciens]]	+	[[Category: Agrobacterium tumefaciens str. c58]]
	[[Category: Chang, C.]]		[[Category: Chang, C.]]
	[[Category: Edwards, A M.]]		[[Category: Edwards, A M.]]
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	[[Category: Putavite sugar binding protein]]		[[Category: Putavite sugar binding protein]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-		+	[[Category: Sugar binding protein]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Sun Nov 16 15:28:54 2008''~~	+

OCA at 13:28, 16 November 2008

2008-11-16T13:28:56Z

←Older revision		Revision as of 13:28, 16 November 2008
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	==About this Structure==		==About this Structure==
-	2OB5 is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA].	+	2OB5 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OB5 OCA].
	[[Category: Agrobacterium tumefaciens]]		[[Category: Agrobacterium tumefaciens]]
-	[[Category: Single protein]]
	[[Category: Chang, C.]]		[[Category: Chang, C.]]
	[[Category: Edwards, A M.]]		[[Category: Edwards, A M.]]
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	[[Category: Structural genomic]]		[[Category: Structural genomic]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Mon Sep 29 00~~:24:56 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:28:54 2008''