2p0g - Revision history

OCA at 10:51, 30 August 2023

2023-08-30T10:51:44Z

←Older revision		Revision as of 10:51, 30 August 2023
Line 3:		Line 3:
	<StructureSection load='2p0g' size='340' side='right'caption='[[2p0g]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='2p0g' size='340' side='right'caption='[[2p0g]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2p0g]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P0G FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2p0g]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P0G FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=MSE:SELENOMETHIONINE'>MSE</scene~~></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.3Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>VC0982 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~666~~ "~~Bacillo virgola del Koch~~" ~~Trevisan 1884])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [https://pdbe.org/2p0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [https://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p0g ProSAT], [https://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [https://pdbe.org/2p0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [https://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p0g ProSAT], [https://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q9KTC1_VIBCH Q9KTC1_VIBCH]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Bacillo virgola del koch trevisan 1884]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Acton~~, T B~~]]	+	[[Category: Vibrio cholerae]]
-	[[Category: Baran~~, M C~~]]	+	[[Category: Acton TB]]
-	[[Category: Benach, J]]	+	[[Category: Baran MC]]
-	[[Category: Cunningham, K]]	+	[[Category: Benach J]]
-	[[Category: Ho~~, C K~~]]	+	[[Category: Cunningham K]]
-	[[Category: Hunt~~, J F~~]]	+	[[Category: Ho CK]]
-	[[Category: Janjua, H]]	+	[[Category: Hunt JF]]
-	[[Category: Liu, J]]	+	[[Category: Janjua H]]
-	[[Category: Ma, L]]	+	[[Category: Liu J]]
-	[[Category: Montelione~~, G T]]~~	+	[[Category: Ma L]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Montelione GT]]
-	[[Category: Neely, H]]	+	[[Category: Neely H]]
-	[[Category: Rost, B]]	+	[[Category: Rost B]]
-	[[Category: Seetharaman, J]]	+	[[Category: Seetharaman J]]
-	[[Category: Tong, L]]	+	[[Category: Tong L]]
-	[[Category: Xiao, R]]	+	[[Category: Xiao R]]
-	~~[[Category: Nesg]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Unknown function]]~~	+
-	~~[[Category: Vcr75~~]]	+

OCA at 13:10, 9 June 2021

2021-06-09T13:10:55Z

←Older revision		Revision as of 13:10, 9 June 2021
Line 1:		Line 1:

	==Crystal structure of Selenoprotein W-related protein from Vibrio cholerae. Northeast Structural Genomics target VcR75==		==Crystal structure of Selenoprotein W-related protein from Vibrio cholerae. Northeast Structural Genomics target VcR75==
-	<StructureSection load='2p0g' size='340' side='right' caption='[[2p0g]], [[Resolution\|resolution]] 2.30Å' scene=''>	+	<StructureSection load='2p0g' size='340' side='right'caption='[[2p0g]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2p0g]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2P0G FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2p0g]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P0G FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">VC0982 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">VC0982 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [~~http~~://pdbe.org/2p0g PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2p0g ProSAT], [~~http~~://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [https://pdbe.org/2p0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [https://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p0g ProSAT], [https://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p0/2p0g_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p0/2p0g_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 21:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Bacillo virgola del koch trevisan 1884]]		[[Category: Bacillo virgola del koch trevisan 1884]]
		+	[[Category: Large Structures]]
	[[Category: Acton, T B]]		[[Category: Acton, T B]]
	[[Category: Baran, M C]]		[[Category: Baran, M C]]

OCA at 09:15, 18 October 2017

2017-10-18T09:15:33Z

←Older revision		Revision as of 09:15, 18 October 2017
Line 1:		Line 1:
		+
	==Crystal structure of Selenoprotein W-related protein from Vibrio cholerae. Northeast Structural Genomics target VcR75==		==Crystal structure of Selenoprotein W-related protein from Vibrio cholerae. Northeast Structural Genomics target VcR75==
	<StructureSection load='2p0g' size='340' side='right' caption='[[2p0g]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='2p0g' size='340' side='right' caption='[[2p0g]], [[Resolution\|resolution]] 2.30Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">VC0982 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">VC0982 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [http://pdbe.org/2p0g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [http://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [http://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [http://pdbe.org/2p0g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [http://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2p0g ProSAT], [http://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 03:40, 9 February 2016

2016-02-09T03:40:48Z

←Older revision		Revision as of 03:40, 9 February 2016
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p0g ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 18:15, 10 September 2015

2015-09-10T18:15:54Z

←Older revision		Revision as of 18:15, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2p0g' size='340' side='right' caption='[[2p0g]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='2p0g' size='340' side='right' caption='[[2p0g]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2p0g]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Vibrio_cholerae Vibrio cholerae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P0G FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2p0g]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P0G FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">VC0982 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 ~~Vibrio cholerae~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">VC0982 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [http://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [http://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [http://pdbe.org/2p0g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [http://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [http://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Vibrio cholerae~~]]	+	[[Category: Bacillo virgola del koch trevisan 1884]]
	[[Category: Acton, T B]]		[[Category: Acton, T B]]
	[[Category: Baran, M C]]		[[Category: Baran, M C]]

OCA at 04:09, 25 December 2014

2014-12-25T04:09:35Z

←Older revision		Revision as of 04:09, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2p0g]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P0G FirstGlance]. <br>		<table><tr><td colspan='2'>[[2p0g]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P0G FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">VC0982 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 Vibrio cholerae])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">VC0982 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 Vibrio cholerae])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [http://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [http://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [http://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [http://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Vibrio cholerae]]		[[Category: Vibrio cholerae]]
-	[[Category: Acton, T B.]]	+	[[Category: Acton, T B]]
-	[[Category: Baran, M C.]]	+	[[Category: Baran, M C]]
-	[[Category: Benach, J.]]	+	[[Category: Benach, J]]
-	[[Category: Cunningham, K.]]	+	[[Category: Cunningham, K]]
-	[[Category: Ho, C K.]]	+	[[Category: Ho, C K]]
-	[[Category: Hunt, J F.]]	+	[[Category: Hunt, J F]]
-	[[Category: Janjua, H.]]	+	[[Category: Janjua, H]]
-	[[Category: Liu, J.]]	+	[[Category: Liu, J]]
-	[[Category: Ma, L.]]	+	[[Category: Ma, L]]
-	[[Category: Montelione, G T~~.]]~~	+	[[Category: Montelione, G T]]
-	~~[[Category: NESG, Northeast Structural Genomics Consortium.]]~~	+
-	~~[[Category: Neely, H.]]~~	+
-	~~[[Category: Rost, B.]]~~	+
-	~~[[Category: Seetharaman, J.]]~~	+
-	~~[[Category: Tong, L.]]~~	+
-	~~[[Category: Xiao, R.]]~~	+
-	~~[[Category: Nesg]]~~	+
-	~~[[Category: Northeast structural genomics consortium]]~~	+
-	~~[[Category: Protein structure initiative]]~~	+
-	~~[[Category: Psi-2~~]]	+
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
		+	[[Category: Neely, H]]
		+	[[Category: Rost, B]]
		+	[[Category: Seetharaman, J]]
		+	[[Category: Tong, L]]
		+	[[Category: Xiao, R]]
		+	[[Category: Nesg]]
		+	[[Category: PSI, Protein structure initiative]]
	[[Category: Unknown function]]		[[Category: Unknown function]]
	[[Category: Vcr75]]		[[Category: Vcr75]]

OCA at 19:45, 30 September 2014

2014-09-30T19:45:25Z

←Older revision		Revision as of 19:45, 30 September 2014
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-	~~[[Image:2p0g.png\|left\|200px]]~~	+	==Crystal structure of Selenoprotein W-related protein from Vibrio cholerae. Northeast Structural Genomics target VcR75==
-		+	<StructureSection load='2p0g' size='340' side='right' caption='[[2p0g]], [[Resolution\|resolution]] 2.30Å' scene=''>
-	~~{{STRUCTURE_2p0g\| PDB=2p0g \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2p0g]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2P0G FirstGlance]. <br>
-	===Crystal structure of Selenoprotein W-related protein from Vibrio cholerae. Northeast Structural Genomics target VcR75===	+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">VC0982 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 Vibrio cholerae])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p0g OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2p0g RCSB], [http://www.ebi.ac.uk/pdbsum/2p0g PDBsum], [http://www.topsan.org/Proteins/NESGC/2p0g TOPSAN]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[2p0g]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p0/2p0g_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Vibrio cholerae]]		[[Category: Vibrio cholerae]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]

OCA: Protected "2p0g" [edit=sysop:move=sysop]

2013-01-07T12:08:39Z

Protected "2p0g" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:08, 7 January 2013

OCA at 12:08, 7 January 2013

2013-01-07T12:08:36Z

←Older revision		Revision as of 12:08, 7 January 2013
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-	{{Seed}}
	[[Image:2p0g.png\|left\|200px]]		[[Image:2p0g.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2p0g", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_2p0g\| PDB=2p0g \| SCENE= }}		{{STRUCTURE_2p0g\| PDB=2p0g \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2P0G~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA].	+	[[2p0g]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA].
	[[Category: Vibrio cholerae]]		[[Category: Vibrio cholerae]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]
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	[[Category: Psi-2]]		[[Category: Psi-2]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
		+	[[Category: Unknown function]]
	[[Category: Vcr75]]		[[Category: Vcr75]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 13:08:39 2008''

OCA at 11:08, 16 November 2008

2008-11-16T11:08:41Z

←Older revision		Revision as of 11:08, 16 November 2008
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	==About this Structure==		==About this Structure==
-	2P0G is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA].	+	2P0G is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P0G OCA].
-	~~[[Category: Single protein]]~~	+
	[[Category: Vibrio cholerae]]		[[Category: Vibrio cholerae]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]
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	[[Category: Vcr75]]		[[Category: Vcr75]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~Sep 28 20~~:07:35 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 13:08:39 2008''