2pcn - Revision history

OCA at 09:00, 25 October 2023

2023-10-25T09:00:20Z

←Older revision		Revision as of 09:00, 25 October 2023
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	<StructureSection load='2pcn' size='340' side='right'caption='[[2pcn]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2pcn' size='340' side='right'caption='[[2pcn]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Geoka Geoka~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PCN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PCN FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.9Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcn OCA], [https://pdbe.org/2pcn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pcn RCSB], [https://www.ebi.ac.uk/pdbsum/2pcn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcn ProSAT], [https://www.topsan.org/Proteins/RSGI/2pcn TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcn OCA], [https://pdbe.org/2pcn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pcn RCSB], [https://www.ebi.ac.uk/pdbsum/2pcn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcn ProSAT], [https://www.topsan.org/Proteins/RSGI/2pcn TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q5KYY8_GEOKA Q5KYY8_GEOKA]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Geoka~~]]	+	[[Category: Geobacillus kaustophilus HTA426]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Agari, Y]]	+	[[Category: Agari Y]]
-	[[Category: Ebihara, A]]	+	[[Category: Ebihara A]]
-	[[Category: Jeyakanthan, J]]	+	[[Category: Jeyakanthan J]]
-	[[Category: Kanaujia~~, S P~~]]	+	[[Category: Kanaujia SP]]
-	[[Category: Kuramitsu, S]]	+	[[Category: Kuramitsu S]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Rafi ZA]]
-	[[Category: Rafi~~, Z A~~]]	+	[[Category: Sekar K]]
-	[[Category: Sekar, K]]	+	[[Category: Shinkai A]]
-	[[Category: Shinkai, A]]	+	[[Category: Shiro Y]]
-	[[Category: Shiro, Y]]	+	[[Category: Yokoyama S]]
-	[[Category: Yokoyama, S]]	+
-	~~[[Category: 2-dimethylmenaquinone methyltransferase]]~~	+
-	~~[[Category: Beta]]~~	+
-	~~[[Category: Beta alpha domain]]~~	+
-	~~[[Category: National project on protein structural and functional analyse]]~~	+
-	~~[[Category: Nppsfa]]~~	+
-	~~[[Category: Rsgi]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 15:21, 17 June 2021

2021-06-17T15:21:07Z

←Older revision		Revision as of 15:21, 17 June 2021
Line 3:		Line 3:
	<StructureSection load='2pcn' size='340' side='right'caption='[[2pcn]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2pcn' size='340' side='right'caption='[[2pcn]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Geoka Geoka]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2PCN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geoka Geoka]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PCN FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2pcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcn OCA], [~~http~~://pdbe.org/2pcn PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2pcn RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2pcn PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcn ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/2pcn TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcn OCA], [https://pdbe.org/2pcn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pcn RCSB], [https://www.ebi.ac.uk/pdbsum/2pcn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcn ProSAT], [https://www.topsan.org/Proteins/RSGI/2pcn TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 08:05, 31 July 2019

2019-07-31T08:05:07Z

←Older revision		Revision as of 08:05, 31 July 2019
Line 1:		Line 1:

	==Crystal structure of S-adenosylmethionine: 2-dimethylmenaquinone methyltransferase (gk_1813) from geobacillus kaustophilus HTA426==		==Crystal structure of S-adenosylmethionine: 2-dimethylmenaquinone methyltransferase (gk_1813) from geobacillus kaustophilus HTA426==
-	<StructureSection load='2pcn' size='340' side='right' caption='[[2pcn]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='2pcn' size='340' side='right'caption='[[2pcn]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geoka Geoka]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCN FirstGlance]. <br>		<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geoka Geoka]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCN FirstGlance]. <br>
Line 11:		Line 11:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pc/2pcn_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pc/2pcn_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Geoka]]		[[Category: Geoka]]
		+	[[Category: Large Structures]]
	[[Category: Agari, Y]]		[[Category: Agari, Y]]
	[[Category: Ebihara, A]]		[[Category: Ebihara, A]]

OCA at 09:23, 18 October 2017

2017-10-18T09:23:20Z

←Older revision		Revision as of 09:23, 18 October 2017
Line 1:		Line 1:
		+
	==Crystal structure of S-adenosylmethionine: 2-dimethylmenaquinone methyltransferase (gk_1813) from geobacillus kaustophilus HTA426==		==Crystal structure of S-adenosylmethionine: 2-dimethylmenaquinone methyltransferase (gk_1813) from geobacillus kaustophilus HTA426==
	<StructureSection load='2pcn' size='340' side='right' caption='[[2pcn]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2pcn' size='340' side='right' caption='[[2pcn]], [[Resolution\|resolution]] 1.90Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geoka Geoka]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCN FirstGlance]. <br>		<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geoka Geoka]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCN FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcn OCA], [http://pdbe.org/2pcn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pcn RCSB], [http://www.ebi.ac.uk/pdbsum/2pcn PDBsum], [http://www.topsan.org/Proteins/RSGI/2pcn TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcn OCA], [http://pdbe.org/2pcn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pcn RCSB], [http://www.ebi.ac.uk/pdbsum/2pcn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcn ProSAT], [http://www.topsan.org/Proteins/RSGI/2pcn TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 14:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pcn ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 23:33, 11 September 2015

2015-09-11T23:33:20Z

←Older revision		Revision as of 23:33, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2pcn' size='340' side='right' caption='[[2pcn]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2pcn' size='340' side='right' caption='[[2pcn]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Geobacillus_kaustophilus Geobacillus kaustophilus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geoka Geoka]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCN FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2pcn RCSB], [http://www.ebi.ac.uk/pdbsum/2pcn PDBsum], [http://www.topsan.org/Proteins/RSGI/2pcn TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcn OCA], [http://pdbe.org/2pcn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pcn RCSB], [http://www.ebi.ac.uk/pdbsum/2pcn PDBsum], [http://www.topsan.org/Proteins/RSGI/2pcn TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 18:		Line 18:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Geobacillus kaustophilus~~]]	+	[[Category: Geoka]]
	[[Category: Agari, Y]]		[[Category: Agari, Y]]
	[[Category: Ebihara, A]]		[[Category: Ebihara, A]]

OCA at 18:44, 19 January 2015

2015-01-19T18:44:04Z

←Older revision		Revision as of 18:44, 19 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCN FirstGlance]. <br>		<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCN FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2pcn RCSB], [http://www.ebi.ac.uk/pdbsum/2pcn PDBsum], [http://www.topsan.org/Proteins/RSGI/2pcn TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2pcn RCSB], [http://www.ebi.ac.uk/pdbsum/2pcn PDBsum], [http://www.topsan.org/Proteins/RSGI/2pcn TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 19:
	</StructureSection>		</StructureSection>
	[[Category: Geobacillus kaustophilus]]		[[Category: Geobacillus kaustophilus]]
-	[[Category: Agari, Y.]]	+	[[Category: Agari, Y]]
-	[[Category: Ebihara, A.]]	+	[[Category: Ebihara, A]]
-	[[Category: Jeyakanthan, J.]]	+	[[Category: Jeyakanthan, J]]
-	[[Category: Kanaujia, S P.]]	+	[[Category: Kanaujia, S P]]
-	[[Category: Kuramitsu, S.]]	+	[[Category: Kuramitsu, S]]
-	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Rafi, Z A.]]	+	[[Category: Rafi, Z A]]
-	[[Category: Sekar, K.]]	+	[[Category: Sekar, K]]
-	[[Category: Shinkai, A.]]	+	[[Category: Shinkai, A]]
-	[[Category: Shiro, Y.]]	+	[[Category: Shiro, Y]]
-	[[Category: Yokoyama, S.]]	+	[[Category: Yokoyama, S]]
	[[Category: 2-dimethylmenaquinone methyltransferase]]		[[Category: 2-dimethylmenaquinone methyltransferase]]
	[[Category: Beta]]		[[Category: Beta]]
Line 35:		Line 35:
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
-	[[Category: Riken structural genomics/proteomics initiative]]
	[[Category: Rsgi]]		[[Category: Rsgi]]
-	[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 20:23, 30 September 2014

2014-09-30T20:23:49Z

←Older revision		Revision as of 20:23, 30 September 2014
Line 1:		Line 1:
-	~~[[Image:2pcn.png\|left\|200px]]~~	+	==Crystal structure of S-adenosylmethionine: 2-dimethylmenaquinone methyltransferase (gk_1813) from geobacillus kaustophilus HTA426==
-		+	<StructureSection load='2pcn' size='340' side='right' caption='[[2pcn]], [[Resolution\|resolution]] 1.90Å' scene=''>
-	~~{{STRUCTURE_2pcn\| PDB=2pcn \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PCN FirstGlance]. <br>
-	===Crystal structure of S-adenosylmethionine: 2-dimethylmenaquinone methyltransferase (gk_1813) from geobacillus kaustophilus HTA426===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene><br>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2pcn RCSB], [http://www.ebi.ac.uk/pdbsum/2pcn PDBsum], [http://www.topsan.org/Proteins/RSGI/2pcn TOPSAN]</span></td></tr>
-		+	<table>
-	==~~About this Structure~~==	+	== Evolutionary Conservation ==
-	[[2pcn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA].	+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pc/2pcn_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Geobacillus kaustophilus]]		[[Category: Geobacillus kaustophilus]]
	[[Category: Agari, Y.]]		[[Category: Agari, Y.]]

OCA: Protected "2pcn" [edit=sysop:move=sysop]

2013-01-07T12:47:30Z

Protected "2pcn" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:47, 7 January 2013

OCA at 12:47, 7 January 2013

2013-01-07T12:47:27Z

←Older revision		Revision as of 12:47, 7 January 2013
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-	{{Seed}}
	[[Image:2pcn.png\|left\|200px]]		[[Image:2pcn.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2pcn", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2pcn\| PDB=2pcn \| SCENE= }}		{{STRUCTURE_2pcn\| PDB=2pcn \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2PCN~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA].	+	[[2pcn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA].
	[[Category: Geobacillus kaustophilus]]		[[Category: Geobacillus kaustophilus]]
	[[Category: Agari, Y.]]		[[Category: Agari, Y.]]
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	[[Category: Rsgi]]		[[Category: Rsgi]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-		+	[[Category: Transferase]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Sun Nov 16 14:46:22 2008''~~	+

OCA at 12:46, 16 November 2008

2008-11-16T12:46:24Z

←Older revision		Revision as of 12:46, 16 November 2008
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	==About this Structure==		==About this Structure==
-	2PCN is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA].	+	2PCN is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA].
	[[Category: Geobacillus kaustophilus]]		[[Category: Geobacillus kaustophilus]]
-	[[Category: Single protein]]
	[[Category: Agari, Y.]]		[[Category: Agari, Y.]]
	[[Category: Ebihara, A.]]		[[Category: Ebihara, A.]]
Line 37:		Line 36:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~Sep 28 22~~:05:38 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:46:22 2008''