2ps2 - Revision history

OCA at 09:11, 21 February 2024

2024-02-21T09:11:40Z

←Older revision		Revision as of 09:11, 21 February 2024
Line 1:		Line 1:

	==Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Aspergillus oryzae==		==Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Aspergillus oryzae==
-	<StructureSection load='2ps2' size='340' side='right'caption='[[2ps2]]' scene=''>	+	<StructureSection load='2ps2' size='340' side='right'caption='[[2ps2]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PS2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ps2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_oryzae_RIB40 Aspergillus oryzae RIB40]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PS2 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ps2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ps2 OCA], [https://pdbe.org/2ps2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ps2 RCSB], [https://www.ebi.ac.uk/pdbsum/2ps2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ps2 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2ps2 TOPSAN]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.8Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ps2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ps2 OCA], [https://pdbe.org/2ps2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ps2 RCSB], [https://www.ebi.ac.uk/pdbsum/2ps2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ps2 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2ps2 TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q2U1E8_ASPOR Q2U1E8_ASPOR]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 18:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Aspergillus oryzae RIB40]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Almo SC]]		[[Category: Almo SC]]

OCA at 15:31, 17 June 2021

2021-06-17T15:31:34Z

←Older revision		Revision as of 15:31, 17 June 2021
Line 1:		Line 1:

	==Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Aspergillus oryzae==		==Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Aspergillus oryzae==
-	<StructureSection load='2ps2' size='340' side='right' caption='[[2ps2]]~~, [[Resolution\|resolution]] 1.80Å~~' scene=''>	+	<StructureSection load='2ps2' size='340' side='right'caption='[[2ps2]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>~~[[2ps2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspor Aspor].~~ Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2PS2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PS2 FirstGlance]. <br>
-	</td></tr>~~<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ps2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ps2 OCA], [https://pdbe.org/2ps2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ps2 RCSB], [https://www.ebi.ac.uk/pdbsum/2ps2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ps2 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2ps2 TOPSAN]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AO090011000058 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=510516 ASPOR])</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ps2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ps2 OCA], [~~http~~://pdbe.org/2ps2 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2ps2 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2ps2 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2ps2 ProSAT], [~~http~~://www.topsan.org/Proteins/NYSGXRC/2ps2 TOPSAN]</span></td></tr>	+
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 20:		Line 18:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Aspor~~]]	+	[[Category: Large Structures]]
-	[[Category: Almo~~, S C~~]]	+	[[Category: Almo SC]]
-	[[Category: Burley~~, S K~~]]	+	[[Category: Burley SK]]
-	[[Category: Fedorov~~, A A~~]]	+	[[Category: Fedorov AA]]
-	[[Category: Fedorov~~, E V]]~~	+	[[Category: Fedorov EV]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Sauder JM]]
-	[[Category: Sauder~~, J M~~]]	+	[[Category: Toro R]]
-	[[Category: Toro, R]]	+
-	~~[[Category: Enolase superfamily]]~~	+
-	~~[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Target 9440a]]~~	+
-	~~[[Category: Unknown function~~]]	+

OCA at 08:32, 29 August 2018

2018-08-29T08:32:46Z

←Older revision		Revision as of 08:32, 29 August 2018
Line 1:		Line 1:
		+
	==Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Aspergillus oryzae==		==Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Aspergillus oryzae==
	<StructureSection load='2ps2' size='340' side='right' caption='[[2ps2]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='2ps2' size='340' side='right' caption='[[2ps2]], [[Resolution\|resolution]] 1.80Å' scene=''>
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	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AO090011000058 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=510516 ASPOR])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AO090011000058 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=510516 ASPOR])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ps2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ps2 OCA], [http://pdbe.org/2ps2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ps2 RCSB], [http://www.ebi.ac.uk/pdbsum/2ps2 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ps2 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ps2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ps2 OCA], [http://pdbe.org/2ps2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ps2 RCSB], [http://www.ebi.ac.uk/pdbsum/2ps2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ps2 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/2ps2 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ps/2ps2_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ps/2ps2_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ps2 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 07:43, 11 September 2015

2015-09-11T07:43:17Z

←Older revision		Revision as of 07:43, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2ps2' size='340' side='right' caption='[[2ps2]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='2ps2' size='340' side='right' caption='[[2ps2]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ps2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Aspergillus_oryzae_rib40 Aspergillus oryzae rib40~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PS2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ps2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspor Aspor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PS2 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AO090011000058 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=510516 ~~Aspergillus oryzae RIB40~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AO090011000058 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=510516 ASPOR])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ps2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ps2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ps2 RCSB], [http://www.ebi.ac.uk/pdbsum/2ps2 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ps2 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ps2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ps2 OCA], [http://pdbe.org/2ps2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ps2 RCSB], [http://www.ebi.ac.uk/pdbsum/2ps2 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ps2 TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Aspergillus oryzae rib40~~]]	+	[[Category: Aspor]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Burley, S K]]		[[Category: Burley, S K]]

OCA at 12:36, 6 November 2014

2014-11-06T12:36:58Z

←Older revision		Revision as of 12:36, 6 November 2014
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Aspergillus oryzae rib40]]
		+	[[Category: Almo, S C]]
		+	[[Category: Burley, S K]]
		+	[[Category: Fedorov, A A]]
		+	[[Category: Fedorov, E V]]
		+	[[Category: Structural genomic]]
		+	[[Category: Sauder, J M]]
		+	[[Category: Toro, R]]
		+	[[Category: Enolase superfamily]]
		+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
		+	[[Category: PSI, Protein structure initiative]]
	[[Category: Target 9440a]]		[[Category: Target 9440a]]
		+	[[Category: Unknown function]]

OCA at 11:56, 6 November 2014

2014-11-06T11:56:28Z

←Older revision		Revision as of 11:56, 6 November 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2ps2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspergillus_oryzae_rib40 Aspergillus oryzae rib40]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PS2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[2ps2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspergillus_oryzae_rib40 Aspergillus oryzae rib40]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PS2 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AO090011000058 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=510516 Aspergillus oryzae RIB40])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AO090011000058 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=510516 Aspergillus oryzae RIB40])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ps2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ps2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ps2 RCSB], [http://www.ebi.ac.uk/pdbsum/2ps2 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ps2 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ps2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ps2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ps2 RCSB], [http://www.ebi.ac.uk/pdbsum/2ps2 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ps2 TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 19:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Aspergillus oryzae rib40]]
-	[[Category: Almo, S C.]]
-	[[Category: Burley, S K.]]
-	[[Category: Fedorov, A A.]]
-	[[Category: Fedorov, E V.]]
-	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
-	[[Category: Sauder, J M.]]
-	[[Category: Toro, R.]]
-	[[Category: Enolase superfamily]]
-	[[Category: New york sgx research center for structural genomic]]
-	[[Category: Nysgxrc]]
-	[[Category: Protein structure initiative]]
-	[[Category: Psi-2]]
-	[[Category: Structural genomic]]
	[[Category: Target 9440a]]		[[Category: Target 9440a]]
-	[[Category: Unknown function]]

OCA at 06:39, 29 September 2014

2014-09-29T06:39:16Z

←Older revision		Revision as of 06:39, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:2ps2.png\|left\|200px]]~~	+	==Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Aspergillus oryzae==
-		+	<StructureSection load='2ps2' size='340' side='right' caption='[[2ps2]], [[Resolution\|resolution]] 1.80Å' scene=''>
-	~~{{STRUCTURE_2ps2\| PDB=2ps2 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2ps2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspergillus_oryzae_rib40 Aspergillus oryzae rib40]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PS2 FirstGlance]. <br>
-	===Crystal structure of putative mandelate racemase/muconate lactonizing enzyme from Aspergillus oryzae===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AO090011000058 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=510516 Aspergillus oryzae RIB40])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ps2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ps2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ps2 RCSB], [http://www.ebi.ac.uk/pdbsum/2ps2 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2ps2 TOPSAN]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[2ps2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspergillus_oryzae_rib40 Aspergillus oryzae rib40]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ps/2ps2_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Aspergillus oryzae rib40]]		[[Category: Aspergillus oryzae rib40]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]

OCA: Protected "2ps2" [edit=sysop:move=sysop]

2012-10-24T06:35:03Z

Protected "2ps2" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:35, 24 October 2012

OCA at 06:35, 24 October 2012

2012-10-24T06:35:01Z

←Older revision		Revision as of 06:35, 24 October 2012
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-	{{Seed}}
	[[Image:2ps2.png\|left\|200px]]		[[Image:2ps2.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2ps2", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_2ps2\| PDB=2ps2 \| SCENE= }}		{{STRUCTURE_2ps2\| PDB=2ps2 \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2PS2~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/~~Aspergillus_oryzae~~ Aspergillus oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA].	+	[[2ps2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspergillus_oryzae_rib40 Aspergillus oryzae rib40]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA].
-	[[Category: Aspergillus oryzae]]	+	[[Category: Aspergillus oryzae rib40]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]
	[[Category: Burley, S K.]]		[[Category: Burley, S K.]]
	[[Category: Fedorov, A A.]]		[[Category: Fedorov, A A.]]
	[[Category: Fedorov, E V.]]		[[Category: Fedorov, E V.]]
-	[[Category: NYSGXRC, New York ~~Structural GenomiX~~ Research ~~Consortium~~.]]	+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
-	[[Category: Sauder, M J.]]	+	[[Category: Sauder, J M.]]
	[[Category: Toro, R.]]		[[Category: Toro, R.]]
	[[Category: Enolase superfamily]]		[[Category: Enolase superfamily]]
-	[[Category: New york ~~structural genomix~~ research ~~consortium~~]]	+	[[Category: New york sgx research center for structural genomic]]
	[[Category: Nysgxrc]]		[[Category: Nysgxrc]]
	[[Category: Protein structure initiative]]		[[Category: Protein structure initiative]]
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	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Target 9440a]]		[[Category: Target 9440a]]
-		+	[[Category: Unknown function]]
-	~~''Page seeded by~~ [~~http~~:~~//oca.weizmann.ac.il/oca OCA~~ ] ~~on Sun Nov 16 15:09:15 2008''~~	+

OCA at 13:09, 16 November 2008

2008-11-16T13:09:17Z

←Older revision		Revision as of 13:09, 16 November 2008
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	==About this Structure==		==About this Structure==
-	2PS2 is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Aspergillus_oryzae Aspergillus oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA].	+	2PS2 is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Aspergillus_oryzae Aspergillus oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS2 OCA].
	[[Category: Aspergillus oryzae]]		[[Category: Aspergillus oryzae]]
-	[[Category: Single protein]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]
	[[Category: Burley, S K.]]		[[Category: Burley, S K.]]
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	[[Category: Target 9440a]]		[[Category: Target 9440a]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~Sep 28 23~~:39:16 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 15:09:15 2008''