2q1k - Revision history

OCA at 08:05, 25 June 2021

2021-06-25T08:05:07Z

←Older revision		Revision as of 08:05, 25 June 2021
Line 1:		Line 1:

	==Cyrstal Structure of AscE from Aeromonas hydrophilla==		==Cyrstal Structure of AscE from Aeromonas hydrophilla==
-	<StructureSection load='2q1k' size='340' side='right' caption='[[2q1k]], [[Resolution\|resolution]] 2.70Å' scene=''>	+	<StructureSection load='2q1k' size='340' side='right'caption='[[2q1k]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2q1k]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"aeromonas_liquefaciens"_kluyver_and_van_niel_1936 "aeromonas liquefaciens" kluyver and van niel 1936]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2Q1K FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2q1k]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"aeromonas_liquefaciens"_kluyver_and_van_niel_1936 "aeromonas liquefaciens" kluyver and van niel 1936]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Q1K FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ascE ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=644 "Aeromonas liquefaciens" Kluyver and van Niel 1936])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ascE ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=644 "Aeromonas liquefaciens" Kluyver and van Niel 1936])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2q1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q1k OCA], [~~http~~://pdbe.org/2q1k PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2q1k RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2q1k PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2q1k ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2q1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q1k OCA], [https://pdbe.org/2q1k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2q1k RCSB], [https://www.ebi.ac.uk/pdbsum/2q1k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2q1k ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q1/2q1k_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q1/2q1k_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 32:		Line 32:
	</StructureSection>		</StructureSection>
	[[Category: Aeromonas liquefaciens kluyver and van niel 1936]]		[[Category: Aeromonas liquefaciens kluyver and van niel 1936]]
		+	[[Category: Large Structures]]
	[[Category: Leung, K Y]]		[[Category: Leung, K Y]]
	[[Category: Mok, Y K]]		[[Category: Mok, Y K]]

OCA at 09:37, 18 October 2017

2017-10-18T09:37:22Z

←Older revision		Revision as of 09:37, 18 October 2017
Line 1:		Line 1:
		+
	==Cyrstal Structure of AscE from Aeromonas hydrophilla==		==Cyrstal Structure of AscE from Aeromonas hydrophilla==
	<StructureSection load='2q1k' size='340' side='right' caption='[[2q1k]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='2q1k' size='340' side='right' caption='[[2q1k]], [[Resolution\|resolution]] 2.70Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ascE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=644 "Aeromonas liquefaciens" Kluyver and van Niel 1936])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ascE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=644 "Aeromonas liquefaciens" Kluyver and van Niel 1936])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q1k OCA], [http://pdbe.org/2q1k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2q1k RCSB], [http://www.ebi.ac.uk/pdbsum/2q1k PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q1k OCA], [http://pdbe.org/2q1k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2q1k RCSB], [http://www.ebi.ac.uk/pdbsum/2q1k PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2q1k ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 03:54, 10 February 2016

2016-02-10T03:54:45Z

←Older revision		Revision as of 03:54, 10 February 2016
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2q1k ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 05:07, 11 September 2015

2015-09-11T05:07:53Z

←Older revision		Revision as of 05:07, 11 September 2015
Line 2:		Line 2:
	<StructureSection load='2q1k' size='340' side='right' caption='[[2q1k]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='2q1k' size='340' side='right' caption='[[2q1k]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2q1k]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Aeromonas_hydrophila Aeromonas hydrophila~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q1K FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2q1k]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"aeromonas_liquefaciens"_kluyver_and_van_niel_1936 "aeromonas liquefaciens" kluyver and van niel 1936]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q1K FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ascE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=644 Aeromonas ~~hydrophila~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ascE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=644 "Aeromonas liquefaciens" Kluyver and van Niel 1936])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q1k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2q1k RCSB], [http://www.ebi.ac.uk/pdbsum/2q1k PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q1k OCA], [http://pdbe.org/2q1k PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2q1k RCSB], [http://www.ebi.ac.uk/pdbsum/2q1k PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 25:		Line 25:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2q1k" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Aeromonas ~~hydrophila~~]]	+	[[Category: Aeromonas liquefaciens kluyver and van niel 1936]]
	[[Category: Leung, K Y]]		[[Category: Leung, K Y]]
	[[Category: Mok, Y K]]		[[Category: Mok, Y K]]

OCA at 14:32, 19 January 2015

2015-01-19T14:32:00Z

←Older revision		Revision as of 14:32, 19 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2q1k]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeromonas_hydrophila Aeromonas hydrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q1K FirstGlance]. <br>		<table><tr><td colspan='2'>[[2q1k]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeromonas_hydrophila Aeromonas hydrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q1K FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ascE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=644 Aeromonas hydrophila])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ascE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=644 Aeromonas hydrophila])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q1k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2q1k RCSB], [http://www.ebi.ac.uk/pdbsum/2q1k PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q1k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2q1k RCSB], [http://www.ebi.ac.uk/pdbsum/2q1k PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 30:		Line 30:
	</StructureSection>		</StructureSection>
	[[Category: Aeromonas hydrophila]]		[[Category: Aeromonas hydrophila]]
-	[[Category: Leung, K Y.]]	+	[[Category: Leung, K Y]]
-	[[Category: Mok, Y K.]]	+	[[Category: Mok, Y K]]
-	[[Category: Sivaraman, J.]]	+	[[Category: Sivaraman, J]]
-	[[Category: Tan, Y W.]]	+	[[Category: Tan, Y W]]
-	[[Category: Yu, H B.]]	+	[[Category: Yu, H B]]
	[[Category: Chaperone]]		[[Category: Chaperone]]
	[[Category: Helix-turn-helix]]		[[Category: Helix-turn-helix]]
	[[Category: Ttss]]		[[Category: Ttss]]

OCA at 18:30, 30 September 2014

2014-09-30T18:30:49Z

←Older revision		Revision as of 18:30, 30 September 2014
Line 1:		Line 1:
-	[[~~Image:~~2q1k.~~png~~\|~~left~~\|200px]]	+	==Cyrstal Structure of AscE from Aeromonas hydrophilla==
		+	<StructureSection load='2q1k' size='340' side='right' caption='[[2q1k]], [[Resolution\|resolution]] 2.70Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2q1k]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeromonas_hydrophila Aeromonas hydrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2Q1K FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ascE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=644 Aeromonas hydrophila])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2q1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2q1k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2q1k RCSB], [http://www.ebi.ac.uk/pdbsum/2q1k PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q1/2q1k_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	In the type III secretion system (T3SS) of Aeromonas hydrophila, the putative needle complex subunit AscF requires both putative chaperones AscE and AscG for formation of a ternary complex to avoid premature assembly. Here we report the crystal structure of AscE at 2.7 A resolution and the mapping of buried regions of AscE, AscG, and AscF in the AscEG and AscEFG complexes using limited protease digestion. The dimeric AscE is comprised of two helix-turn-helix monomers packed in an antiparallel fashion. The N-terminal 13 residues of AscE are buried only upon binding with AscG, but this region is found to be nonessential for the interaction. AscE functions as a monomer and can be coexpressed with AscG or with both AscG and AscF to form soluble complexes. The AscE binding region of AscG in the AscEG complex is identified to be within the N-terminal 61 residues of AscG. The exposed C-terminal substrate-binding region of AscG in the AscEG complex is induced to be buried only upon binding to AscF. However, the N-terminal 52 residues of AscF remain exposed even in the ternary AscEFG complex. On the other hand, the 35-residue C-terminal region of AscF in the complex is resistant to protease digestion in the AscEFG complex. Site-directed mutagenesis showed that two C-terminal hydrophobic residues, Ile83 and Leu84, of AscF are essential for chaperone binding.

-	~~{{STRUCTURE_2q1k\| PDB=2q1k \| SCENE= }}~~	+	Structure of AscE and induced burial regions in AscE and AscG upon formation of the chaperone needle-subunit complex of type III secretion system in Aeromonas hydrophila.,Tan YW, Yu HB, Leung KY, Sivaraman J, Mok YK Protein Sci. 2008 Oct;17(10):1748-60. Epub 2008 Jul 28. PMID:18662905<ref>PMID:18662905</ref>

-	~~===Cyrstal Structure~~ of ~~AscE from Aeromonas hydrophilla===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_18662905}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[2q1k]] is a 4 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Aeromonas_hydrophila Aeromonas hydrophila]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:018662905<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Aeromonas hydrophila]]		[[Category: Aeromonas hydrophila]]
	[[Category: Leung, K Y.]]		[[Category: Leung, K Y.]]

OCA: Protected "2q1k" [edit=sysop:move=sysop]

2013-01-07T18:24:51Z

Protected "2q1k" [edit=sysop:move=sysop]

←Older revision

Revision as of 18:24, 7 January 2013

OCA at 18:24, 7 January 2013

2013-01-07T18:24:50Z

←Older revision		Revision as of 18:24, 7 January 2013
Line 1:		Line 1:
-	{{Seed}}
	[[Image:2q1k.png\|left\|200px]]		[[Image:2q1k.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2q1k", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2q1k\| PDB=2q1k \| SCENE= }}		{{STRUCTURE_2q1k\| PDB=2q1k \| SCENE= }}

	===Cyrstal Structure of AscE from Aeromonas hydrophilla===		===Cyrstal Structure of AscE from Aeromonas hydrophilla===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_18662905}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 18662905 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_18662905}}		{{ABSTRACT_PUBMED_18662905}}

	==About this Structure==		==About this Structure==
-	~~2Q1K~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Aeromonas_hydrophila Aeromonas hydrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA].	+	[[2q1k]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeromonas_hydrophila Aeromonas hydrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~18662905~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:018662905</ref><references group="xtra"/>
	[[Category: Aeromonas hydrophila]]		[[Category: Aeromonas hydrophila]]
	[[Category: Leung, K Y.]]		[[Category: Leung, K Y.]]
Line 33:		Line 21:
	[[Category: Helix-turn-helix]]		[[Category: Helix-turn-helix]]
	[[Category: Ttss]]		[[Category: Ttss]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 15:13:47 2009''

OCA at 13:13, 17 February 2009

2009-02-17T13:13:49Z

←Older revision		Revision as of 13:13, 17 February 2009
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
-	2Q1K is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Aeromonas_hydrophila Aeromonas hydrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA].	+	2Q1K is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Aeromonas_hydrophila Aeromonas hydrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA].

	==Reference==		==Reference==
-	Structure of AscE and induced burial regions in AscE and AscG upon formation of the chaperone needle-subunit complex of type III secretion system in Aeromonas hydrophila., Tan YW, Yu HB, Leung KY, Sivaraman J, Mok YK, Protein Sci. 2008 Oct;17(10):1748-60. Epub 2008 Jul 28. PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/18662905 18662905]~~	+	<ref group="xtra">PMID:18662905</ref><references group="xtra"/>
	[[Category: Aeromonas hydrophila]]		[[Category: Aeromonas hydrophila]]
-	[[Category: ~~Single protein~~]]	+	[[Category: Leung, K Y.]]
-	[[Category: ~~Pdbx_ordinal=~~, ~~<PDBx~~:~~audit_author~~.]]	+	[[Category: Mok, Y K.]]
		+	[[Category: Sivaraman, J.]]
		+	[[Category: Tan, Y W.]]
		+	[[Category: Yu, H B.]]
	[[Category: Chaperone]]		[[Category: Chaperone]]
	[[Category: Helix-turn-helix]]		[[Category: Helix-turn-helix]]
	[[Category: Ttss]]		[[Category: Ttss]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Dec 10 20~~:16:~~59 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 15:13:47 2009''

OCA at 06:17, 11 December 2008

2008-12-11T06:17:08Z

←Older revision		Revision as of 06:17, 11 December 2008
Line 20:		Line 20:

	==About this Structure==		==About this Structure==
-	2Q1K is a ~~4 chains~~ structure of ~~sequences~~ from [http://en.wikipedia.org/wiki/Aeromonas_hydrophila Aeromonas hydrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA].	+	2Q1K is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aeromonas_hydrophila Aeromonas hydrophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Q1K OCA].

	==Reference==		==Reference==
	Structure of AscE and induced burial regions in AscE and AscG upon formation of the chaperone needle-subunit complex of type III secretion system in Aeromonas hydrophila., Tan YW, Yu HB, Leung KY, Sivaraman J, Mok YK, Protein Sci. 2008 Oct;17(10):1748-60. Epub 2008 Jul 28. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18662905 18662905]		Structure of AscE and induced burial regions in AscE and AscG upon formation of the chaperone needle-subunit complex of type III secretion system in Aeromonas hydrophila., Tan YW, Yu HB, Leung KY, Sivaraman J, Mok YK, Protein Sci. 2008 Oct;17(10):1748-60. Epub 2008 Jul 28. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18662905 18662905]
	[[Category: Aeromonas hydrophila]]		[[Category: Aeromonas hydrophila]]
-	[[Category: ~~Leung, K Y.~~]]	+	[[Category: Single protein]]
-	[[Category: ~~Mok~~, ~~Y K.]]~~	+	[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
-	~~[[Category~~: ~~Sivaraman, J.]]~~	+
-	~~[[Category: Tan, Y W.]]~~	+
-	~~[[Category: Yu, H B~~.]]	+
	[[Category: Chaperone]]		[[Category: Chaperone]]
	[[Category: Helix-turn-helix]]		[[Category: Helix-turn-helix]]
	[[Category: Ttss]]		[[Category: Ttss]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Thu Nov~~ 20 07:52:45 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 10 20:16:59 2008''