2qcv - Revision history

OCA at 06:49, 25 January 2023

2023-01-25T06:49:20Z

←Older revision		Revision as of 06:49, 25 January 2023
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	<StructureSection load='2qcv' size='340' side='right'caption='[[2qcv]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2qcv' size='340' side='right'caption='[[2qcv]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2qcv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Bachd Bachd~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QCV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2qcv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkalihalobacillus_halodurans_C-125 Alkalihalobacillus halodurans C-125]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QCV FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=~~PGE~~:~~TRIETHYLENE+GLYCOL~~'>~~PGE~~</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene>~~</td></tr>~~	+
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NP_243185.1, iolC, BH2319 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272558 BACHD])</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qcv OCA], [https://pdbe.org/2qcv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qcv RCSB], [https://www.ebi.ac.uk/pdbsum/2qcv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qcv ProSAT], [https://www.topsan.org/Proteins/JCSG/2qcv TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qcv OCA], [https://pdbe.org/2qcv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qcv RCSB], [https://www.ebi.ac.uk/pdbsum/2qcv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qcv ProSAT], [https://www.topsan.org/Proteins/JCSG/2qcv TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/~~IOLC_BACHD IOLC_BACHD]~~] Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D-gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP).[HAMAP-Rule:MF_01668]	+	[https://www.uniprot.org/uniprot/IOLC_HALH5 IOLC_HALH5] Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D-gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP).[HAMAP-Rule:MF_01668]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bachd~~]]	+	[[Category: Alkalihalobacillus halodurans C-125]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Structural genomic]]
-	[[Category: Jcsg]]
-	[[Category: PSI, Protein structure initiative]]
-	[[Category: Putative 5-dehydro-2- deoxygluconokinase]]
-	[[Category: Transferase]]

OCA at 08:15, 25 June 2021

2021-06-25T08:15:51Z

←Older revision		Revision as of 08:15, 25 June 2021
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	<StructureSection load='2qcv' size='340' side='right'caption='[[2qcv]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2qcv' size='340' side='right'caption='[[2qcv]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2qcv]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Bachd Bachd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2QCV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2qcv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bachd Bachd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QCV FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NP_243185.1, iolC, BH2319 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272558 BACHD])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NP_243185.1, iolC, BH2319 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272558 BACHD])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2qcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qcv OCA], [~~http~~://pdbe.org/2qcv PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2qcv RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2qcv PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2qcv ProSAT], [~~http~~://www.topsan.org/Proteins/JCSG/2qcv TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qcv OCA], [https://pdbe.org/2qcv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qcv RCSB], [https://www.ebi.ac.uk/pdbsum/2qcv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qcv ProSAT], [https://www.topsan.org/Proteins/JCSG/2qcv TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/IOLC_BACHD IOLC_BACHD]] Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D-gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP).[HAMAP-Rule:MF_01668]	+	[[https://www.uniprot.org/uniprot/IOLC_BACHD IOLC_BACHD]] Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D-gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP).[HAMAP-Rule:MF_01668]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 07:29, 24 July 2019

2019-07-24T07:29:02Z

←Older revision		Revision as of 07:29, 24 July 2019
Line 1:		Line 1:

	==CRYSTAL STRUCTURE OF a putative 5-dehydro-2-deoxygluconokinase (IOLC) FROM BACILLUS HALODURANS C-125 AT 1.90 A RESOLUTION==		==CRYSTAL STRUCTURE OF a putative 5-dehydro-2-deoxygluconokinase (IOLC) FROM BACILLUS HALODURANS C-125 AT 1.90 A RESOLUTION==
-	<StructureSection load='2qcv' size='340' side='right' caption='[[2qcv]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='2qcv' size='340' side='right'caption='[[2qcv]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2qcv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bachd Bachd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QCV FirstGlance]. <br>		<table><tr><td colspan='2'>[[2qcv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bachd Bachd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QCV FirstGlance]. <br>
Line 15:		Line 15:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qc/2qcv_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qc/2qcv_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 24:		Line 24:
	</StructureSection>		</StructureSection>
	[[Category: Bachd]]		[[Category: Bachd]]
		+	[[Category: Large Structures]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Jcsg]]		[[Category: Jcsg]]

OCA at 09:43, 18 October 2017

2017-10-18T09:43:22Z

←Older revision		Revision as of 09:43, 18 October 2017
Line 1:		Line 1:
		+
	==CRYSTAL STRUCTURE OF a putative 5-dehydro-2-deoxygluconokinase (IOLC) FROM BACILLUS HALODURANS C-125 AT 1.90 A RESOLUTION==		==CRYSTAL STRUCTURE OF a putative 5-dehydro-2-deoxygluconokinase (IOLC) FROM BACILLUS HALODURANS C-125 AT 1.90 A RESOLUTION==
	<StructureSection load='2qcv' size='340' side='right' caption='[[2qcv]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2qcv' size='340' side='right' caption='[[2qcv]], [[Resolution\|resolution]] 1.90Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NP_243185.1, iolC, BH2319 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272558 BACHD])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NP_243185.1, iolC, BH2319 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272558 BACHD])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qcv OCA], [http://pdbe.org/2qcv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qcv RCSB], [http://www.ebi.ac.uk/pdbsum/2qcv PDBsum], [http://www.topsan.org/Proteins/JCSG/2qcv TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qcv OCA], [http://pdbe.org/2qcv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qcv RCSB], [http://www.ebi.ac.uk/pdbsum/2qcv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2qcv ProSAT], [http://www.topsan.org/Proteins/JCSG/2qcv TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 14:46, 7 February 2016

2016-02-07T14:46:32Z

←Older revision		Revision as of 14:46, 7 February 2016
Line 18:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qcv ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 02:30, 10 September 2015

2015-09-10T02:30:32Z

←Older revision		Revision as of 02:30, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2qcv' size='340' side='right' caption='[[2qcv]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='2qcv' size='340' side='right' caption='[[2qcv]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2qcv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacillus_halodurans_c-125 Bacillus halodurans c-125~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QCV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2qcv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bachd Bachd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QCV FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NP_243185.1, iolC, BH2319 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272558 ~~Bacillus halodurans C-125~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NP_243185.1, iolC, BH2319 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272558 BACHD])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qcv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2qcv RCSB], [http://www.ebi.ac.uk/pdbsum/2qcv PDBsum], [http://www.topsan.org/Proteins/JCSG/2qcv TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qcv OCA], [http://pdbe.org/2qcv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qcv RCSB], [http://www.ebi.ac.uk/pdbsum/2qcv PDBsum], [http://www.topsan.org/Proteins/JCSG/2qcv TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/IOLC_BACHD IOLC_BACHD]] Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D-gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP).[HAMAP-Rule:MF_01668]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus halodurans c-125~~]]	+	[[Category: Bachd]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Jcsg]]		[[Category: Jcsg]]

OCA at 16:36, 19 January 2015

2015-01-19T16:36:51Z

←Older revision		Revision as of 16:36, 19 January 2015
Line 1:		Line 1:
-	~~[[Image:2qcv.png\|left\|200px]]~~	+	==CRYSTAL STRUCTURE OF a putative 5-dehydro-2-deoxygluconokinase (IOLC) FROM BACILLUS HALODURANS C-125 AT 1.90 A RESOLUTION==
-		+	<StructureSection load='2qcv' size='340' side='right' caption='[[2qcv]], [[Resolution\|resolution]] 1.90Å' scene=''>
-	~~{{STRUCTURE_2qcv\| PDB=2qcv \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2qcv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans_c-125 Bacillus halodurans c-125]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QCV FirstGlance]. <br>
-	===CRYSTAL STRUCTURE OF a putative 5-dehydro-2-deoxygluconokinase (IOLC) FROM BACILLUS HALODURANS C-125 AT 1.90 A RESOLUTION===	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
-		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NP_243185.1, iolC, BH2319 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272558 Bacillus halodurans C-125])</td></tr>
-	==~~About this Structure~~==	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qcv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qcv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2qcv RCSB], [http://www.ebi.ac.uk/pdbsum/2qcv PDBsum], [http://www.topsan.org/Proteins/JCSG/2qcv TOPSAN]</span></td></tr>
-	[[2qcv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans_c-125 Bacillus halodurans c-125]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA].	+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qc/2qcv_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Bacillus halodurans c-125]]		[[Category: Bacillus halodurans c-125]]
-	[[Category: ~~JCSG, Joint Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
	[[Category: Jcsg]]		[[Category: Jcsg]]
-	[[Category: ~~Joint center for structural genomic]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
-	~~[[Category: Psi-2~~]]	+
	[[Category: Putative 5-dehydro-2- deoxygluconokinase]]		[[Category: Putative 5-dehydro-2- deoxygluconokinase]]
-	[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA: Protected "2qcv" [edit=sysop:move=sysop]

2013-01-07T22:04:32Z

Protected "2qcv" [edit=sysop:move=sysop]

←Older revision

Revision as of 22:04, 7 January 2013

OCA at 22:04, 7 January 2013

2013-01-07T22:04:29Z

←Older revision		Revision as of 22:04, 7 January 2013
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-	{{Seed}}
	[[Image:2qcv.png\|left\|200px]]		[[Image:2qcv.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2qcv", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_2qcv\| PDB=2qcv \| SCENE= }}		{{STRUCTURE_2qcv\| PDB=2qcv \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	~~2QCV~~ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacteria Bacteria~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA].	+	[[2qcv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans_c-125 Bacillus halodurans c-125]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA].
-	[[Category: ~~Bacteria~~]]	+	[[Category: Bacillus halodurans c-125]]
	[[Category: JCSG, Joint Center for Structural Genomics.]]		[[Category: JCSG, Joint Center for Structural Genomics.]]
	[[Category: Jcsg]]		[[Category: Jcsg]]
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	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 28 12:07:26 2010''

OCA at 08:00, 28 July 2010

2010-07-28T08:00:43Z

←Older revision		Revision as of 08:00, 28 July 2010
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	{{STRUCTURE_2qcv\| PDB=2qcv \| SCENE= }}		{{STRUCTURE_2qcv\| PDB=2qcv \| SCENE= }}

-	===~~Crystal structure of~~ a putative 5-dehydro-2-deoxygluconokinase (~~NP_243185.1~~) ~~from Bacillus halodurans at~~ 1.90 A ~~resolution~~===	+	===CRYSTAL STRUCTURE OF a putative 5-dehydro-2-deoxygluconokinase (IOLC) FROM BACILLUS HALODURANS C-125 AT 1.90 A RESOLUTION===


	==About this Structure==		==About this Structure==
-	2QCV is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/~~Bacillus_halodurans Bacillus halodurans~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA].	+	2QCV is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QCV OCA].
-	[[Category: ~~Bacillus halodurans~~]]	+	[[Category: Bacteria]]
	[[Category: JCSG, Joint Center for Structural Genomics.]]		[[Category: JCSG, Joint Center for Structural Genomics.]]
	[[Category: Jcsg]]		[[Category: Jcsg]]
	[[Category: Joint center for structural genomic]]		[[Category: Joint center for structural genomic]]
-	[[Category: Np_243185 1]]
-	[[Category: Pfkb family carbohydrate kinase]]
	[[Category: Protein structure initiative]]		[[Category: Protein structure initiative]]
	[[Category: Psi-2]]		[[Category: Psi-2]]
-	[[Category: Putative 5-dehydro-2-deoxygluconokinase]]	+	[[Category: Putative 5-dehydro-2- deoxygluconokinase]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Sun Nov 16 17~~:07:~~34 2008~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 28 12:07:26 2010''