2qgg - Revision history

OCA at 08:19, 25 June 2021

2021-06-25T08:19:20Z

←Older revision		Revision as of 08:19, 25 June 2021
Line 1:		Line 1:

	==X-Ray structure of the protein Q6F7I0 from Acinetobacter calcoaceticus AmMS 248. Northeast Structural Genomics Consortium target AsR73.==		==X-Ray structure of the protein Q6F7I0 from Acinetobacter calcoaceticus AmMS 248. Northeast Structural Genomics Consortium target AsR73.==
-	<StructureSection load='2qgg' size='340' side='right' caption='[[2qgg]], [[Resolution\|resolution]] 2.40Å' scene=''>	+	<StructureSection load='2qgg' size='340' side='right'caption='[[2qgg]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2qgg]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"micrococcus_calco-aceticus"_beijerinck_1911 "micrococcus calco-aceticus" beijerinck 1911]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGG OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2QGG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2qgg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"micrococcus_calco-aceticus"_beijerinck_1911 "micrococcus calco-aceticus" beijerinck 1911]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QGG FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rimM, ACIAD3312 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471 "Micrococcus calco-aceticus" Beijerinck 1911])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rimM, ACIAD3312 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471 "Micrococcus calco-aceticus" Beijerinck 1911])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2qgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgg OCA], [~~http~~://pdbe.org/2qgg PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2qgg RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2qgg PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2qgg ProSAT], [~~http~~://www.topsan.org/Proteins/NESGC/2qgg TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgg OCA], [https://pdbe.org/2qgg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qgg RCSB], [https://www.ebi.ac.uk/pdbsum/2qgg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qgg ProSAT], [https://www.topsan.org/Proteins/NESGC/2qgg TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/RIMM_ACIAD RIMM_ACIAD]] An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (By similarity).	+	[[https://www.uniprot.org/uniprot/RIMM_ACIAD RIMM_ACIAD]] An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 24:		Line 24:
	</StructureSection>		</StructureSection>
	[[Category: Micrococcus calco-aceticus beijerinck 1911]]		[[Category: Micrococcus calco-aceticus beijerinck 1911]]
		+	[[Category: Large Structures]]
	[[Category: Acton, T B]]		[[Category: Acton, T B]]
	[[Category: Baran, M C]]		[[Category: Baran, M C]]

OCA at 18:59, 24 January 2018

2018-01-24T18:59:37Z

←Older revision		Revision as of 18:59, 24 January 2018
Line 1:		Line 1:
		+
	==X-Ray structure of the protein Q6F7I0 from Acinetobacter calcoaceticus AmMS 248. Northeast Structural Genomics Consortium target AsR73.==		==X-Ray structure of the protein Q6F7I0 from Acinetobacter calcoaceticus AmMS 248. Northeast Structural Genomics Consortium target AsR73.==
	<StructureSection load='2qgg' size='340' side='right' caption='[[2qgg]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='2qgg' size='340' side='right' caption='[[2qgg]], [[Resolution\|resolution]] 2.40Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rimM, ACIAD3312 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471 "Micrococcus calco-aceticus" Beijerinck 1911])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rimM, ACIAD3312 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471 "Micrococcus calco-aceticus" Beijerinck 1911])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgg OCA], [http://pdbe.org/2qgg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qgg RCSB], [http://www.ebi.ac.uk/pdbsum/2qgg PDBsum], [http://www.topsan.org/Proteins/NESGC/2qgg TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgg OCA], [http://pdbe.org/2qgg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qgg RCSB], [http://www.ebi.ac.uk/pdbsum/2qgg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2qgg ProSAT], [http://www.topsan.org/Proteins/NESGC/2qgg TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 14:		Line 15:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qg/2qgg_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qg/2qgg_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 31:		Line 32:
	[[Category: Kuzin, A P]]		[[Category: Kuzin, A P]]
	[[Category: Liu, J]]		[[Category: Liu, J]]
-	[[Category: Ma, L-C]]	+	[[Category: Ma, L C]]
	[[Category: Montelione, G T]]		[[Category: Montelione, G T]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

OCA at 14:13, 8 February 2016

2016-02-08T14:13:48Z

←Older revision		Revision as of 14:13, 8 February 2016
Line 18:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qgg ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 12:21, 10 September 2015

2015-09-10T12:21:38Z

←Older revision		Revision as of 12:21, 10 September 2015
Line 2:		Line 2:
	<StructureSection load='2qgg' size='340' side='right' caption='[[2qgg]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='2qgg' size='340' side='right' caption='[[2qgg]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2qgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Acinetobacter_calcoaceticus Acinetobacter calcoaceticus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QGG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2qgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_calco-aceticus"_beijerinck_1911 "micrococcus calco-aceticus" beijerinck 1911]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QGG FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rimM, ACIAD3312 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471 ~~Acinetobacter calcoaceticus~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rimM, ACIAD3312 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471 "Micrococcus calco-aceticus" Beijerinck 1911])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2qgg RCSB], [http://www.ebi.ac.uk/pdbsum/2qgg PDBsum], [http://www.topsan.org/Proteins/NESGC/2qgg TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgg OCA], [http://pdbe.org/2qgg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qgg RCSB], [http://www.ebi.ac.uk/pdbsum/2qgg PDBsum], [http://www.topsan.org/Proteins/NESGC/2qgg TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Acinetobacter calcoaceticus~~]]	+	[[Category: Micrococcus calco-aceticus beijerinck 1911]]
	[[Category: Acton, T B]]		[[Category: Acton, T B]]
	[[Category: Baran, M C]]		[[Category: Baran, M C]]
Line 39:		Line 39:
	[[Category: Wang, D]]		[[Category: Wang, D]]
	[[Category: Xiao, R]]		[[Category: Xiao, R]]
		+	[[Category: Acinetobacter calcoaceticus]]
	[[Category: Asr73]]		[[Category: Asr73]]
	[[Category: Nesg]]		[[Category: Nesg]]
	[[Category: PSI, Protein structure initiative]]		[[Category: PSI, Protein structure initiative]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 23:55, 24 December 2014

2014-12-24T23:55:08Z

←Older revision		Revision as of 23:55, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2qgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Acinetobacter_calcoaceticus Acinetobacter calcoaceticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QGG FirstGlance]. <br>		<table><tr><td colspan='2'>[[2qgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Acinetobacter_calcoaceticus Acinetobacter calcoaceticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QGG FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rimM, ACIAD3312 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471 Acinetobacter calcoaceticus])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rimM, ACIAD3312 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471 Acinetobacter calcoaceticus])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2qgg RCSB], [http://www.ebi.ac.uk/pdbsum/2qgg PDBsum], [http://www.topsan.org/Proteins/NESGC/2qgg TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2qgg RCSB], [http://www.ebi.ac.uk/pdbsum/2qgg PDBsum], [http://www.topsan.org/Proteins/NESGC/2qgg TOPSAN]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/RIMM_ACIAD RIMM_ACIAD]] An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Acinetobacter calcoaceticus]]		[[Category: Acinetobacter calcoaceticus]]
-	[[Category: Acton, T B.]]	+	[[Category: Acton, T B]]
-	[[Category: Baran, M C.]]	+	[[Category: Baran, M C]]
-	[[Category: Cunningham, K.]]	+	[[Category: Cunningham, K]]
-	[[Category: Hunt, J F.]]	+	[[Category: Hunt, J F]]
-	[[Category: Janjua, H.]]	+	[[Category: Janjua, H]]
-	[[Category: Jayaraman, S.]]	+	[[Category: Jayaraman, S]]
-	[[Category: Kuzin, A P.]]	+	[[Category: Kuzin, A P]]
-	[[Category: Liu, J.]]	+	[[Category: Liu, J]]
-	[[Category: Ma, L-C.]]	+	[[Category: Ma, L-C]]
-	[[Category: Montelione, G T.]]	+	[[Category: Montelione, G T]]
-	[[Category: ~~NESG, Northeast~~ Structural ~~Genomics Consortium.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Rost, B.]]	+	[[Category: Rost, B]]
-	[[Category: Su, M.]]	+	[[Category: Su, M]]
-	[[Category: Tong, L.]]	+	[[Category: Tong, L]]
-	[[Category: Wang, D.]]	+	[[Category: Wang, D]]
-	[[Category: Xiao, R~~.]]~~	+	[[Category: Xiao, R]]
-	~~[[Category: Acinetobacter calcoaceticus~~]]	+
	[[Category: Asr73]]		[[Category: Asr73]]
	[[Category: Nesg]]		[[Category: Nesg]]
-	[[Category: ~~Northeast structural genomics consortium]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
-	~~[[Category: Psi-2]]~~	+
-	~~[[Category: Structural genomic~~]]	+
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA at 19:50, 30 September 2014

2014-09-30T19:50:25Z

←Older revision		Revision as of 19:50, 30 September 2014
Line 1:		Line 1:
-	~~[[Image:2qgg.png\|left\|200px]]~~	+	==X-Ray structure of the protein Q6F7I0 from Acinetobacter calcoaceticus AmMS 248. Northeast Structural Genomics Consortium target AsR73.==
-		+	<StructureSection load='2qgg' size='340' side='right' caption='[[2qgg]], [[Resolution\|resolution]] 2.40Å' scene=''>
-	~~{{STRUCTURE_2qgg\| PDB=2qgg \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2qgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Acinetobacter_calcoaceticus Acinetobacter calcoaceticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QGG FirstGlance]. <br>
-	===X-Ray structure of the protein Q6F7I0 from Acinetobacter calcoaceticus AmMS 248. Northeast Structural Genomics Consortium target AsR73.===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rimM, ACIAD3312 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=471 Acinetobacter calcoaceticus])</td></tr>
-	==~~About this Structure~~==	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2qgg RCSB], [http://www.ebi.ac.uk/pdbsum/2qgg PDBsum], [http://www.topsan.org/Proteins/NESGC/2qgg TOPSAN]</span></td></tr>
-	[[2qgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Acinetobacter_calcoaceticus Acinetobacter calcoaceticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGG OCA].	+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qg/2qgg_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Acinetobacter calcoaceticus]]		[[Category: Acinetobacter calcoaceticus]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]

OCA: Protected "2qgg" [edit=sysop:move=sysop]

2013-01-07T19:53:23Z

Protected "2qgg" [edit=sysop:move=sysop]

←Older revision

Revision as of 19:53, 7 January 2013

OCA at 19:53, 7 January 2013

2013-01-07T19:53:21Z

←Older revision		Revision as of 19:53, 7 January 2013
Line 1:		Line 1:
-	{{Seed}}
	[[Image:2qgg.png\|left\|200px]]		[[Image:2qgg.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2qgg", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2qgg\| PDB=2qgg \| SCENE= }}		{{STRUCTURE_2qgg\| PDB=2qgg \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~2QGG~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Acinetobacter_calcoaceticus Acinetobacter calcoaceticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGG OCA].	+	[[2qgg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Acinetobacter_calcoaceticus Acinetobacter calcoaceticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGG OCA].
	[[Category: Acinetobacter calcoaceticus]]		[[Category: Acinetobacter calcoaceticus]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]
Line 39:		Line 32:
	[[Category: Psi-2]]		[[Category: Psi-2]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-	[[Category: ~~X-ray~~]]	+	[[Category: Unknown function]]
-		+
-	~~''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 13:13:31 2008''~~	+

OCA at 11:13, 16 November 2008

2008-11-16T11:13:33Z

←Older revision		Revision as of 11:13, 16 November 2008
Line 14:		Line 14:

	==About this Structure==		==About this Structure==
-	2QGG is a ~~[[Single protein]]~~ structure of sequence from [http://en.wikipedia.org/wiki/Acinetobacter_calcoaceticus Acinetobacter calcoaceticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGG OCA].	+	2QGG is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Acinetobacter_calcoaceticus Acinetobacter calcoaceticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGG OCA].
	[[Category: Acinetobacter calcoaceticus]]		[[Category: Acinetobacter calcoaceticus]]
-	[[Category: Single protein]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]
	[[Category: Baran, M C.]]		[[Category: Baran, M C.]]
Line 42:		Line 41:
	[[Category: X-ray]]		[[Category: X-ray]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~Sep 28 20~~:14:20 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 13:13:31 2008''

OCA at 17:14, 28 September 2008

2008-09-28T17:14:26Z

←Older revision		Revision as of 17:14, 28 September 2008
Line 1:		Line 1:
-	[[Image:2qgg.~~jpg~~\|left\|200px]]	+	{{Seed}}
		+	[[Image:2qgg.png\|left\|200px]]

	<!--		<!--
Line 9:		Line 10:
	{{STRUCTURE_2qgg\| PDB=2qgg \| SCENE= }}		{{STRUCTURE_2qgg\| PDB=2qgg \| SCENE= }}

-	~~'''~~X-Ray structure of the protein Q6F7I0 from Acinetobacter calcoaceticus AmMS 248. Northeast Structural Genomics Consortium target AsR73.~~'''~~	+	===X-Ray structure of the protein Q6F7I0 from Acinetobacter calcoaceticus AmMS 248. Northeast Structural Genomics Consortium target AsR73.===


Line 40:		Line 41:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: X-ray]]		[[Category: X-ray]]
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~May 4 14~~:54:57 2008''	+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 20:14:20 2008''