2rrk - Revision history

OCA at 10:03, 14 June 2023

2023-06-14T10:03:18Z

←Older revision		Revision as of 10:03, 14 June 2023
Line 1:		Line 1:

	==Solution structure of the E. coli ORF135 protein==		==Solution structure of the E. coli ORF135 protein==
-	<StructureSection load='2rrk' size='340' side='right'caption='[[2rrk~~]], [[NMR_Ensembles_of_Models \| 20 NMR models~~]]' scene=''>	+	<StructureSection load='2rrk' size='340' side='right'caption='[[2rrk]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2rrk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Ecoli Ecoli~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RRK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2rrk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RRK FirstGlance]. <br>
	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rrk OCA], [https://pdbe.org/2rrk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rrk RCSB], [https://www.ebi.ac.uk/pdbsum/2rrk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rrk ProSAT]</span></td></tr>		</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rrk OCA], [https://pdbe.org/2rrk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rrk RCSB], [https://www.ebi.ac.uk/pdbsum/2rrk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rrk ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/NUDG_ECOLI NUDG_ECOLI]] Hydrolase with a preference for pyrimidine substrates. Has high activity with 5-methyl-dCTP, and much lower activity with CTP, dCTP, 5-hydroxy-dCTP, 2-hydroxy-dATP and 8-hydroxy-dGTP.<ref>PMID:11053429</ref> <ref>PMID:12509230</ref> <ref>PMID:15823026</ref>	+	[https://www.uniprot.org/uniprot/NUDG_ECOLI NUDG_ECOLI] Hydrolase with a preference for pyrimidine substrates. Has high activity with 5-methyl-dCTP, and much lower activity with CTP, dCTP, 5-hydroxy-dCTP, 2-hydroxy-dATP and 8-hydroxy-dGTP.<ref>PMID:11053429</ref> <ref>PMID:12509230</ref> <ref>PMID:15823026</ref>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Ecoli~~]]	+	[[Category: Escherichia coli K-12]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Kawasaki, K]]	+	[[Category: Kawasaki K]]
-	[[Category: Mishima, M]]	+	[[Category: Mishima M]]
-	~~[[Category: Hydrolase]]~~	+
-	~~[[Category: Pyrophospho hydrolase~~]]	+

OCA at 12:25, 23 March 2022

2022-03-23T12:25:47Z

←Older revision		Revision as of 12:25, 23 March 2022
Line 3:		Line 3:
	<StructureSection load='2rrk' size='340' side='right'caption='[[2rrk]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2rrk' size='340' side='right'caption='[[2rrk]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2rrk]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2RRK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2rrk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RRK FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2rrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rrk OCA], [~~http~~://pdbe.org/2rrk PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2rrk RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2rrk PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2rrk ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rrk OCA], [https://pdbe.org/2rrk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rrk RCSB], [https://www.ebi.ac.uk/pdbsum/2rrk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rrk ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/NUDG_ECOLI NUDG_ECOLI]] Hydrolase with a preference for pyrimidine substrates. Has high activity with 5-methyl-dCTP, and much lower activity with CTP, dCTP, 5-hydroxy-dCTP, 2-hydroxy-dATP and 8-hydroxy-dGTP.<ref>PMID:11053429</ref> <ref>PMID:12509230</ref> <ref>PMID:15823026</ref>	+	[[https://www.uniprot.org/uniprot/NUDG_ECOLI NUDG_ECOLI]] Hydrolase with a preference for pyrimidine substrates. Has high activity with 5-methyl-dCTP, and much lower activity with CTP, dCTP, 5-hydroxy-dCTP, 2-hydroxy-dATP and 8-hydroxy-dGTP.<ref>PMID:11053429</ref> <ref>PMID:12509230</ref> <ref>PMID:15823026</ref>
	== References ==		== References ==
	<references/>		<references/>

OCA at 11:04, 17 June 2020

2020-06-17T11:04:49Z

←Older revision		Revision as of 11:04, 17 June 2020
Line 1:		Line 1:

	==Solution structure of the E. coli ORF135 protein==		==Solution structure of the E. coli ORF135 protein==
-	<StructureSection load='2rrk' size='340' side='right' caption='[[2rrk]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>	+	<StructureSection load='2rrk' size='340' side='right'caption='[[2rrk]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2rrk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2RRK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2rrk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2RRK FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2rrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rrk OCA], [http://pdbe.org/2rrk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2rrk RCSB], [http://www.ebi.ac.uk/pdbsum/2rrk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2rrk ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2rrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rrk OCA], [http://pdbe.org/2rrk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2rrk RCSB], [http://www.ebi.ac.uk/pdbsum/2rrk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2rrk ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 13:
	</StructureSection>		</StructureSection>
	[[Category: Ecoli]]		[[Category: Ecoli]]
		+	[[Category: Large Structures]]
	[[Category: Kawasaki, K]]		[[Category: Kawasaki, K]]
	[[Category: Mishima, M]]		[[Category: Mishima, M]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Pyrophospho hydrolase]]		[[Category: Pyrophospho hydrolase]]

OCA at 06:25, 5 August 2016

2016-08-05T06:25:22Z

←Older revision		Revision as of 06:25, 5 August 2016
Line 1:		Line 1:
		+
	==Solution structure of the E. coli ORF135 protein==		==Solution structure of the E. coli ORF135 protein==
	<StructureSection load='2rrk' size='340' side='right' caption='[[2rrk]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2rrk' size='340' side='right' caption='[[2rrk]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2rrk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia coli~~]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2RRK FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2rrk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2RRK FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rrk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2rrk RCSB], [http://www.ebi.ac.uk/pdbsum/2rrk PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rrk OCA], [http://pdbe.org/2rrk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2rrk RCSB], [http://www.ebi.ac.uk/pdbsum/2rrk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2rrk ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/NUDG_ECOLI NUDG_ECOLI]] Hydrolase with a preference for pyrimidine substrates. Has high activity with 5-methyl-dCTP, and much lower activity with CTP, dCTP, 5-hydroxy-dCTP, 2-hydroxy-dATP and 8-hydroxy-dGTP.<ref>PMID:11053429</ref> <ref>PMID:12509230</ref> <ref>PMID:15823026</ref>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia coli~~]]	+	[[Category: Ecoli]]
	[[Category: Kawasaki, K]]		[[Category: Kawasaki, K]]
	[[Category: Mishima, M]]		[[Category: Mishima, M]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Pyrophospho hydrolase]]		[[Category: Pyrophospho hydrolase]]

OCA at 22:15, 3 January 2015

2015-01-03T22:15:49Z

←Older revision		Revision as of 22:15, 3 January 2015
Line 2:		Line 2:
	<StructureSection load='2rrk' size='340' side='right' caption='[[2rrk]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>		<StructureSection load='2rrk' size='340' side='right' caption='[[2rrk]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2rrk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA]. ~~<br>~~	+	<table><tr><td colspan='2'>[[2rrk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2RRK FirstGlance]. <br>
-	~~</td></tr><tr><td class="sblockLbl">~~<b>~~Activity:~~</b>~~</td><td class="sblockDat"><span class='plainlinks'>~~[http://en.~~wikipedia~~.~~org~~/~~wiki/Glucokinase Glucokinase], with EC number [http://www.brenda~~-~~enzymes.info~~/~~php~~/~~result_flat~~.~~php4~~?~~ecno~~=~~2.7.1.2 2.7.1.2~~] <~~/span~~></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rrk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2rrk RCSB], [http://www.ebi.ac.uk/pdbsum/2rrk PDBsum]</span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rrk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2rrk RCSB], [http://www.ebi.ac.uk/pdbsum/2rrk PDBsum]</span></td></tr>	+	</table>
-	<table>	+
-	~~== References ==~~	+
-	~~<references/~~>	+
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Kawasaki, K.]]	+	[[Category: Kawasaki, K]]
-	[[Category: Mishima, M.]]	+	[[Category: Mishima, M]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
	[[Category: Pyrophospho hydrolase]]		[[Category: Pyrophospho hydrolase]]

OCA at 08:42, 7 May 2014

2014-05-07T08:42:21Z

←Older revision		Revision as of 08:42, 7 May 2014
Line 1:		Line 1:
-	~~[[Image:2rrk.jpg\|left\|200px]]~~	+	==Solution structure of the E. coli ORF135 protein==
-		+	<StructureSection load='2rrk' size='340' side='right' caption='[[2rrk]], [[NMR_Ensembles_of_Models \| 20 NMR models]]' scene=''>
-	~~<!--~~	+	== Structural highlights ==
-	~~The line below this paragraph, containing "STRUCTURE_2rrk", creates the "Structure Box" on the page.~~	+	<table><tr><td colspan='2'>[[2rrk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA]. <br>
-	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~	+	</td></tr><tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rrk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2rrk RCSB], [http://www.ebi.ac.uk/pdbsum/2rrk PDBsum]</span></td></tr>
-	~~or leave the SCENE parameter empty for the default display.~~	+	<table>
-	~~-->~~	+	== References ==
-	~~{{STRUCTURE_2rrk\| PDB=2rrk \| SCENE= }}~~	+	<references/>
-		+	__TOC__
-	===Solution structure of the E. coli ORF135 protein===	+	</StructureSection>
-		+
-		+
-	==~~About this Structure~~==	+
-	[[2rrk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA].	+
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Kawasaki, K.]]		[[Category: Kawasaki, K.]]

OCA at 10:48, 18 January 2012

2012-01-18T10:48:43Z

←Older revision		Revision as of 10:48, 18 January 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:2rrk.jpg\|left\|200px]]

-	The ~~entry 2rrk~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_2rrk", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_2rrk\| PDB=2rrk \| SCENE= }}

-	~~Authors: Kawasaki, K., Mishima, M~~.	+	===Solution structure of the E. coli ORF135 protein===

-	~~Description: Solution~~ structure ~~of the E~~. coli ~~ORF135 protein~~	+
		+	==About this Structure==
		+	[[2rrk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RRK OCA].
		+	[[Category: Escherichia coli]]
		+	[[Category: Kawasaki, K.]]
		+	[[Category: Mishima, M.]]
		+	[[Category: Hydrolase]]
		+	[[Category: Pyrophospho hydrolase]]

OCA at 05:39, 19 January 2011

2011-01-19T05:39:46Z

←Older revision		Revision as of 05:39, 19 January 2011
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 2rrk is ON HOLD	+	The entry 2rrk is ON HOLD until Paper Publication

	Authors: Kawasaki, K., Mishima, M.		Authors: Kawasaki, K., Mishima, M.

	Description: Solution structure of the E. coli ORF135 protein		Description: Solution structure of the E. coli ORF135 protein

OCA: Protected "2rrk" [edit=sysop:move=sysop]

2011-01-12T04:39:46Z

Protected "2rrk" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:39, 12 January 2011

OCA: New page: '''Unreleased structure''' The entry 2rrk is ON HOLD Authors: Kawasaki, K., Mishima, M. Description: Solution structure of the E. coli ORF135 protein

2011-01-12T04:39:46Z

New page: '''Unreleased structure''' The entry 2rrk is ON HOLD Authors: Kawasaki, K., Mishima, M. Description: Solution structure of the E. coli ORF135 protein

New page

'''Unreleased structure'''

The entry 2rrk is ON HOLD

Authors: Kawasaki, K., Mishima, M.

Description: Solution structure of the E. coli ORF135 protein