2wso - Revision history

OCA at 10:15, 20 December 2023

2023-12-20T10:15:16Z

←Older revision		Revision as of 10:15, 20 December 2023
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	<StructureSection load='2wso' size='340' side='right'caption='[[2wso]], [[Resolution\|resolution]] 1.15Å' scene=''>		<StructureSection load='2wso' size='340' side='right'caption='[[2wso]], [[Resolution\|resolution]] 1.15Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wso]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Aeqvi Aeqvi~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WSO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wso]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WSO FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non~~-~~Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.15Å</td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1cv7\|1cv7]], [[1gfl\|1gfl]], [[2emn\|2emn]], [[1jc0\|1jc0]], [[1qyq\|1qyq]], [[1rm9\|1rm9]], [[2fzu\|2fzu]], [[1ema\|1ema]], [[1rmo\|1rmo]], [[1f09\|1f09]], [[1yhg\|1yhg]], [[1kp5\|1kp5]], [[1q73\|1q73]], [[1jbz\|1jbz]], [[2b3q\|2b3q]], [[1z1p\|1z1p]], [[1kyr\|1kyr]], [[1yhh\|1yhh]], [[2aha\|2aha]], [[1rmm\|1rmm]], [[2b3p\|2b3p]], [[1emm\|1emm]], [[2fwq\|2fwq]], [[1rrx\|1rrx]], [[1qxt\|1qxt]], [[1myw\|1myw]], [[1emg\|1emg]], [[1rmp\|1rmp]], [[1qy3\|1qy3]], [[2yfp\|2yfp]], [[1emb\|1emb]], [[1q4e\|1q4e]], [[2emd\|2emd]], [[1b9c\|1b9c]], [[1w7s\|1w7s]], [[1jby\|1jby]], [[1q4d\|1q4d]], [[1kys\|1kys]], [[1f0b\|1f0b]], [[1c4f\|1c4f]], [[1h6r\|1h6r]], [[1jc1\|1jc1]], [[1q4a\|1q4a]], [[1eml\|1eml]], [[1w7t\|1w7t]], [[1qyo\|1qyo]], [[1emk\|1emk]], [[2emo\|2emo]], [[1bfp\|1bfp]], [[1huy\|1huy]], [[1q4b\|1q4b]], [[1w7u\|1w7u]], [[1hcj\|1hcj]], [[1yjf\|1yjf]], [[1emc\|1emc]], [[1q4c\|1q4c]], [[1yfp\|1yfp]], [[1emf\|1emf]], [[1yj2\|1yj2]], [[2ah8\|2ah8]], [[1kyp\|1kyp]], [[1yhi\|1yhi]], [[1z1q\|1z1q]], [[1eme\|1eme]], [[1qyf\|1qyf]], [[2wsn\|2wsn]]</div></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wso OCA], [https://pdbe.org/2wso PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wso RCSB], [https://www.ebi.ac.uk/pdbsum/2wso PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wso ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wso OCA], [https://pdbe.org/2wso PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wso RCSB], [https://www.ebi.ac.uk/pdbsum/2wso PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wso ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Aeqvi~~]]	+	[[Category: Aequorea victoria]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Bourgeois, D]]	+	[[Category: Bourgeois D]]
-	[[Category: Chazal, R]]	+	[[Category: Chazal R]]
-	[[Category: Field~~, M J~~]]	+	[[Category: Field MJ]]
-	[[Category: Lazareno-Saez, C]]	+	[[Category: Lazareno-Saez C]]
-	[[Category: Lelimousin, M]]	+	[[Category: Le Vot S]]
-	[[Category: Macheboeuf, P]]	+	[[Category: Lelimousin M]]
-	[[Category: Noirclerc-Savoye, M]]	+	[[Category: Macheboeuf P]]
-	[[Category: Paetzold, B]]	+	[[Category: Noirclerc-Savoye M]]
-	[[Category: Royant, A]]	+	[[Category: Paetzold B]]
-	~~[[Category: Vot, S Le]]~~	+	[[Category: Royant A]]
-	~~[[Category: Chromophore]]~~	+
-	~~[[Category: Fluorescent protein]]~~	+
-	~~[[Category: Luminescence]]~~	+
-	~~[[Category: Photoprotein~~]]	+

OCA at 16:45, 3 November 2021

2021-11-03T16:45:19Z

←Older revision		Revision as of 16:45, 3 November 2021
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	<StructureSection load='2wso' size='340' side='right'caption='[[2wso]], [[Resolution\|resolution]] 1.15Å' scene=''>		<StructureSection load='2wso' size='340' side='right'caption='[[2wso]], [[Resolution\|resolution]] 1.15Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wso]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2WSO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wso]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WSO FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cv7\|1cv7]], [[1gfl\|1gfl]], [[2emn\|2emn]], [[1jc0\|1jc0]], [[1qyq\|1qyq]], [[1rm9\|1rm9]], [[2fzu\|2fzu]], [[1ema\|1ema]], [[1rmo\|1rmo]], [[1f09\|1f09]], [[1yhg\|1yhg]], [[1kp5\|1kp5]], [[1q73\|1q73]], [[1jbz\|1jbz]], [[2b3q\|2b3q]], [[1z1p\|1z1p]], [[1kyr\|1kyr]], [[1yhh\|1yhh]], [[2aha\|2aha]], [[1rmm\|1rmm]], [[2b3p\|2b3p]], [[1emm\|1emm]], [[2fwq\|2fwq]], [[1rrx\|1rrx]], [[1qxt\|1qxt]], [[1myw\|1myw]], [[1emg\|1emg]], [[1rmp\|1rmp]], [[1qy3\|1qy3]], [[2yfp\|2yfp]], [[1emb\|1emb]], [[1q4e\|1q4e]], [[2emd\|2emd]], [[1b9c\|1b9c]], [[1w7s\|1w7s]], [[1jby\|1jby]], [[1q4d\|1q4d]], [[1kys\|1kys]], [[1f0b\|1f0b]], [[1c4f\|1c4f]], [[1h6r\|1h6r]], [[1jc1\|1jc1]], [[1q4a\|1q4a]], [[1eml\|1eml]], [[1w7t\|1w7t]], [[1qyo\|1qyo]], [[1emk\|1emk]], [[2emo\|2emo]], [[1bfp\|1bfp]], [[1huy\|1huy]], [[1q4b\|1q4b]], [[1w7u\|1w7u]], [[1hcj\|1hcj]], [[1yjf\|1yjf]], [[1emc\|1emc]], [[1q4c\|1q4c]], [[1yfp\|1yfp]], [[1emf\|1emf]], [[1yj2\|1yj2]], [[2ah8\|2ah8]], [[1kyp\|1kyp]], [[1yhi\|1yhi]], [[1z1q\|1z1q]], [[1eme\|1eme]], [[1qyf\|1qyf]], [[2wsn\|2wsn]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1cv7\|1cv7]], [[1gfl\|1gfl]], [[2emn\|2emn]], [[1jc0\|1jc0]], [[1qyq\|1qyq]], [[1rm9\|1rm9]], [[2fzu\|2fzu]], [[1ema\|1ema]], [[1rmo\|1rmo]], [[1f09\|1f09]], [[1yhg\|1yhg]], [[1kp5\|1kp5]], [[1q73\|1q73]], [[1jbz\|1jbz]], [[2b3q\|2b3q]], [[1z1p\|1z1p]], [[1kyr\|1kyr]], [[1yhh\|1yhh]], [[2aha\|2aha]], [[1rmm\|1rmm]], [[2b3p\|2b3p]], [[1emm\|1emm]], [[2fwq\|2fwq]], [[1rrx\|1rrx]], [[1qxt\|1qxt]], [[1myw\|1myw]], [[1emg\|1emg]], [[1rmp\|1rmp]], [[1qy3\|1qy3]], [[2yfp\|2yfp]], [[1emb\|1emb]], [[1q4e\|1q4e]], [[2emd\|2emd]], [[1b9c\|1b9c]], [[1w7s\|1w7s]], [[1jby\|1jby]], [[1q4d\|1q4d]], [[1kys\|1kys]], [[1f0b\|1f0b]], [[1c4f\|1c4f]], [[1h6r\|1h6r]], [[1jc1\|1jc1]], [[1q4a\|1q4a]], [[1eml\|1eml]], [[1w7t\|1w7t]], [[1qyo\|1qyo]], [[1emk\|1emk]], [[2emo\|2emo]], [[1bfp\|1bfp]], [[1huy\|1huy]], [[1q4b\|1q4b]], [[1w7u\|1w7u]], [[1hcj\|1hcj]], [[1yjf\|1yjf]], [[1emc\|1emc]], [[1q4c\|1q4c]], [[1yfp\|1yfp]], [[1emf\|1emf]], [[1yj2\|1yj2]], [[2ah8\|2ah8]], [[1kyp\|1kyp]], [[1yhi\|1yhi]], [[1z1q\|1z1q]], [[1eme\|1eme]], [[1qyf\|1qyf]], [[2wsn\|2wsn]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2wso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wso OCA], [~~http~~://pdbe.org/2wso PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2wso RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2wso PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2wso ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wso OCA], [https://pdbe.org/2wso PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wso RCSB], [https://www.ebi.ac.uk/pdbsum/2wso PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wso ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 07:16, 23 October 2019

2019-10-23T07:16:14Z

←Older revision		Revision as of 07:16, 23 October 2019
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	==Structure of Cerulean Fluorescent Protein at physiological pH==		==Structure of Cerulean Fluorescent Protein at physiological pH==
-	<StructureSection load='2wso' size='340' side='right' caption='[[2wso]], [[Resolution\|resolution]] 1.15Å' scene=''>	+	<StructureSection load='2wso' size='340' side='right'caption='[[2wso]], [[Resolution\|resolution]] 1.15Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2wso]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WSO FirstGlance]. <br>		<table><tr><td colspan='2'>[[2wso]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WSO FirstGlance]. <br>
Line 29:		Line 29:

	==See Also==		==See Also==
-	*[[Green Fluorescent Protein\|Green Fluorescent Protein]]	+	*[[Green Fluorescent Protein 3D structures\|Green Fluorescent Protein 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
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	</StructureSection>		</StructureSection>
	[[Category: Aeqvi]]		[[Category: Aeqvi]]
		+	[[Category: Large Structures]]
	[[Category: Bourgeois, D]]		[[Category: Bourgeois, D]]
	[[Category: Chazal, R]]		[[Category: Chazal, R]]

OCA at 09:39, 26 September 2018

2018-09-26T09:39:36Z

←Older revision		Revision as of 09:39, 26 September 2018
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-	==~~STRUCTURE OF CERULEAN FLUORESCENT PROTEIN AT PHYSIOLOGICAL PH~~==	+
		+	==Structure of Cerulean Fluorescent Protein at physiological pH==
	<StructureSection load='2wso' size='340' side='right' caption='[[2wso]], [[Resolution\|resolution]] 1.15Å' scene=''>		<StructureSection load='2wso' size='340' side='right' caption='[[2wso]], [[Resolution\|resolution]] 1.15Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
Line 5:		Line 6:
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cv7\|1cv7]], [[1gfl\|1gfl]], [[2emn\|2emn]], [[1jc0\|1jc0]], [[1qyq\|1qyq]], [[1rm9\|1rm9]], [[2fzu\|2fzu]], [[1ema\|1ema]], [[1rmo\|1rmo]], [[1f09\|1f09]], [[1yhg\|1yhg]], [[1kp5\|1kp5]], [[1q73\|1q73]], [[1jbz\|1jbz]], [[2b3q\|2b3q]], [[1z1p\|1z1p]], [[1kyr\|1kyr]], [[1yhh\|1yhh]], [[2aha\|2aha]], [[1rmm\|1rmm]], [[2b3p\|2b3p]], [[1emm\|1emm]], [[2fwq\|2fwq]], [[1rrx\|1rrx]], [[1qxt\|1qxt]], [[1myw\|1myw]], [[1emg\|1emg]], [[1rmp\|1rmp]], [[1qy3\|1qy3]], [[2yfp\|2yfp]], [[1emb\|1emb]], [[1q4e\|1q4e]], [[2emd\|2emd]], [[1b9c\|1b9c]], [[1w7s\|1w7s]], [[1jby\|1jby]], [[1q4d\|1q4d]], [[1kys\|1kys]], [[1f0b\|1f0b]], [[1c4f\|1c4f]], [[1h6r\|1h6r]], [[1jc1\|1jc1]], [[1q4a\|1q4a]], [[1eml\|1eml]], [[1w7t\|1w7t]], [[1qyo\|1qyo]], [[1emk\|1emk]], [[2emo\|2emo]], [[1bfp\|1bfp]], [[1huy\|1huy]], [[1q4b\|1q4b]], [[1w7u\|1w7u]], [[1hcj\|1hcj]], [[1yjf\|1yjf]], [[1emc\|1emc]], [[1q4c\|1q4c]], [[1yfp\|1yfp]], [[1emf\|1emf]], [[1yj2\|1yj2]], [[2ah8\|2ah8]], [[1kyp\|1kyp]], [[1yhi\|1yhi]], [[1z1q\|1z1q]], [[1eme\|1eme]], [[1qyf\|1qyf]], [[2wsn\|2wsn]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cv7\|1cv7]], [[1gfl\|1gfl]], [[2emn\|2emn]], [[1jc0\|1jc0]], [[1qyq\|1qyq]], [[1rm9\|1rm9]], [[2fzu\|2fzu]], [[1ema\|1ema]], [[1rmo\|1rmo]], [[1f09\|1f09]], [[1yhg\|1yhg]], [[1kp5\|1kp5]], [[1q73\|1q73]], [[1jbz\|1jbz]], [[2b3q\|2b3q]], [[1z1p\|1z1p]], [[1kyr\|1kyr]], [[1yhh\|1yhh]], [[2aha\|2aha]], [[1rmm\|1rmm]], [[2b3p\|2b3p]], [[1emm\|1emm]], [[2fwq\|2fwq]], [[1rrx\|1rrx]], [[1qxt\|1qxt]], [[1myw\|1myw]], [[1emg\|1emg]], [[1rmp\|1rmp]], [[1qy3\|1qy3]], [[2yfp\|2yfp]], [[1emb\|1emb]], [[1q4e\|1q4e]], [[2emd\|2emd]], [[1b9c\|1b9c]], [[1w7s\|1w7s]], [[1jby\|1jby]], [[1q4d\|1q4d]], [[1kys\|1kys]], [[1f0b\|1f0b]], [[1c4f\|1c4f]], [[1h6r\|1h6r]], [[1jc1\|1jc1]], [[1q4a\|1q4a]], [[1eml\|1eml]], [[1w7t\|1w7t]], [[1qyo\|1qyo]], [[1emk\|1emk]], [[2emo\|2emo]], [[1bfp\|1bfp]], [[1huy\|1huy]], [[1q4b\|1q4b]], [[1w7u\|1w7u]], [[1hcj\|1hcj]], [[1yjf\|1yjf]], [[1emc\|1emc]], [[1q4c\|1q4c]], [[1yfp\|1yfp]], [[1emf\|1emf]], [[1yj2\|1yj2]], [[2ah8\|2ah8]], [[1kyp\|1kyp]], [[1yhi\|1yhi]], [[1z1q\|1z1q]], [[1eme\|1eme]], [[1qyf\|1qyf]], [[2wsn\|2wsn]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wso OCA], [http://pdbe.org/2wso PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wso RCSB], [http://www.ebi.ac.uk/pdbsum/2wso PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wso OCA], [http://pdbe.org/2wso PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wso RCSB], [http://www.ebi.ac.uk/pdbsum/2wso PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wso ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ws/2wso_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ws/2wso_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 17:50, 9 February 2016

2016-02-09T17:50:43Z

←Older revision		Revision as of 17:50, 9 February 2016
Line 2:		Line 2:
	<StructureSection load='2wso' size='340' side='right' caption='[[2wso]], [[Resolution\|resolution]] 1.15Å' scene=''>		<StructureSection load='2wso' size='340' side='right' caption='[[2wso]], [[Resolution\|resolution]] 1.15Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2wso]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Aequorea_victoria Aequorea victoria~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WSO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2wso]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WSO FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cv7\|1cv7]], [[1gfl\|1gfl]], [[2emn\|2emn]], [[1jc0\|1jc0]], [[1qyq\|1qyq]], [[1rm9\|1rm9]], [[2fzu\|2fzu]], [[1ema\|1ema]], [[1rmo\|1rmo]], [[1f09\|1f09]], [[1yhg\|1yhg]], [[1kp5\|1kp5]], [[1q73\|1q73]], [[1jbz\|1jbz]], [[2b3q\|2b3q]], [[1z1p\|1z1p]], [[1kyr\|1kyr]], [[1yhh\|1yhh]], [[2aha\|2aha]], [[1rmm\|1rmm]], [[2b3p\|2b3p]], [[1emm\|1emm]], [[2fwq\|2fwq]], [[1rrx\|1rrx]], [[1qxt\|1qxt]], [[1myw\|1myw]], [[1emg\|1emg]], [[1rmp\|1rmp]], [[1qy3\|1qy3]], [[2yfp\|2yfp]], [[1emb\|1emb]], [[1q4e\|1q4e]], [[2emd\|2emd]], [[1b9c\|1b9c]], [[1w7s\|1w7s]], [[1jby\|1jby]], [[1q4d\|1q4d]], [[1kys\|1kys]], [[1f0b\|1f0b]], [[1c4f\|1c4f]], [[1h6r\|1h6r]], [[1jc1\|1jc1]], [[1q4a\|1q4a]], [[1eml\|1eml]], [[1w7t\|1w7t]], [[1qyo\|1qyo]], [[1emk\|1emk]], [[2emo\|2emo]], [[1bfp\|1bfp]], [[1huy\|1huy]], [[1q4b\|1q4b]], [[1w7u\|1w7u]], [[1hcj\|1hcj]], [[1yjf\|1yjf]], [[1emc\|1emc]], [[1q4c\|1q4c]], [[1yfp\|1yfp]], [[1emf\|1emf]], [[1yj2\|1yj2]], [[2ah8\|2ah8]], [[1kyp\|1kyp]], [[1yhi\|1yhi]], [[1z1q\|1z1q]], [[1eme\|1eme]], [[1qyf\|1qyf]], [[2wsn\|2wsn]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cv7\|1cv7]], [[1gfl\|1gfl]], [[2emn\|2emn]], [[1jc0\|1jc0]], [[1qyq\|1qyq]], [[1rm9\|1rm9]], [[2fzu\|2fzu]], [[1ema\|1ema]], [[1rmo\|1rmo]], [[1f09\|1f09]], [[1yhg\|1yhg]], [[1kp5\|1kp5]], [[1q73\|1q73]], [[1jbz\|1jbz]], [[2b3q\|2b3q]], [[1z1p\|1z1p]], [[1kyr\|1kyr]], [[1yhh\|1yhh]], [[2aha\|2aha]], [[1rmm\|1rmm]], [[2b3p\|2b3p]], [[1emm\|1emm]], [[2fwq\|2fwq]], [[1rrx\|1rrx]], [[1qxt\|1qxt]], [[1myw\|1myw]], [[1emg\|1emg]], [[1rmp\|1rmp]], [[1qy3\|1qy3]], [[2yfp\|2yfp]], [[1emb\|1emb]], [[1q4e\|1q4e]], [[2emd\|2emd]], [[1b9c\|1b9c]], [[1w7s\|1w7s]], [[1jby\|1jby]], [[1q4d\|1q4d]], [[1kys\|1kys]], [[1f0b\|1f0b]], [[1c4f\|1c4f]], [[1h6r\|1h6r]], [[1jc1\|1jc1]], [[1q4a\|1q4a]], [[1eml\|1eml]], [[1w7t\|1w7t]], [[1qyo\|1qyo]], [[1emk\|1emk]], [[2emo\|2emo]], [[1bfp\|1bfp]], [[1huy\|1huy]], [[1q4b\|1q4b]], [[1w7u\|1w7u]], [[1hcj\|1hcj]], [[1yjf\|1yjf]], [[1emc\|1emc]], [[1q4c\|1q4c]], [[1yfp\|1yfp]], [[1emf\|1emf]], [[1yj2\|1yj2]], [[2ah8\|2ah8]], [[1kyp\|1kyp]], [[1yhi\|1yhi]], [[1z1q\|1z1q]], [[1eme\|1eme]], [[1qyf\|1qyf]], [[2wsn\|2wsn]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wso OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wso RCSB], [http://www.ebi.ac.uk/pdbsum/2wso PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wso OCA], [http://pdbe.org/2wso PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wso RCSB], [http://www.ebi.ac.uk/pdbsum/2wso PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wso ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 25:		Line 25:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2wso" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 32:		Line 33:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Aequorea victoria~~]]	+	[[Category: Aeqvi]]
	[[Category: Bourgeois, D]]		[[Category: Bourgeois, D]]
	[[Category: Chazal, R]]		[[Category: Chazal, R]]

OCA at 10:49, 20 January 2015

2015-01-20T10:49:40Z

←Older revision		Revision as of 10:49, 20 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2wso]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WSO FirstGlance]. <br>		<table><tr><td colspan='2'>[[2wso]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WSO FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cv7\|1cv7]], [[1gfl\|1gfl]], [[2emn\|2emn]], [[1jc0\|1jc0]], [[1qyq\|1qyq]], [[1rm9\|1rm9]], [[2fzu\|2fzu]], [[1ema\|1ema]], [[1rmo\|1rmo]], [[1f09\|1f09]], [[1yhg\|1yhg]], [[1kp5\|1kp5]], [[1q73\|1q73]], [[1jbz\|1jbz]], [[2b3q\|2b3q]], [[1z1p\|1z1p]], [[1kyr\|1kyr]], [[1yhh\|1yhh]], [[2aha\|2aha]], [[1rmm\|1rmm]], [[2b3p\|2b3p]], [[1emm\|1emm]], [[2fwq\|2fwq]], [[1rrx\|1rrx]], [[1qxt\|1qxt]], [[1myw\|1myw]], [[1emg\|1emg]], [[1rmp\|1rmp]], [[1qy3\|1qy3]], [[2yfp\|2yfp]], [[1emb\|1emb]], [[1q4e\|1q4e]], [[2emd\|2emd]], [[1b9c\|1b9c]], [[1w7s\|1w7s]], [[1jby\|1jby]], [[1q4d\|1q4d]], [[1kys\|1kys]], [[1f0b\|1f0b]], [[1c4f\|1c4f]], [[1h6r\|1h6r]], [[1jc1\|1jc1]], [[1q4a\|1q4a]], [[1eml\|1eml]], [[1w7t\|1w7t]], [[1qyo\|1qyo]], [[1emk\|1emk]], [[2emo\|2emo]], [[1bfp\|1bfp]], [[1huy\|1huy]], [[1q4b\|1q4b]], [[1w7u\|1w7u]], [[1hcj\|1hcj]], [[1yjf\|1yjf]], [[1emc\|1emc]], [[1q4c\|1q4c]], [[1yfp\|1yfp]], [[1emf\|1emf]], [[1yj2\|1yj2]], [[2ah8\|2ah8]], [[1kyp\|1kyp]], [[1yhi\|1yhi]], [[1z1q\|1z1q]], [[1eme\|1eme]], [[1qyf\|1qyf]], [[2wsn\|2wsn]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cv7\|1cv7]], [[1gfl\|1gfl]], [[2emn\|2emn]], [[1jc0\|1jc0]], [[1qyq\|1qyq]], [[1rm9\|1rm9]], [[2fzu\|2fzu]], [[1ema\|1ema]], [[1rmo\|1rmo]], [[1f09\|1f09]], [[1yhg\|1yhg]], [[1kp5\|1kp5]], [[1q73\|1q73]], [[1jbz\|1jbz]], [[2b3q\|2b3q]], [[1z1p\|1z1p]], [[1kyr\|1kyr]], [[1yhh\|1yhh]], [[2aha\|2aha]], [[1rmm\|1rmm]], [[2b3p\|2b3p]], [[1emm\|1emm]], [[2fwq\|2fwq]], [[1rrx\|1rrx]], [[1qxt\|1qxt]], [[1myw\|1myw]], [[1emg\|1emg]], [[1rmp\|1rmp]], [[1qy3\|1qy3]], [[2yfp\|2yfp]], [[1emb\|1emb]], [[1q4e\|1q4e]], [[2emd\|2emd]], [[1b9c\|1b9c]], [[1w7s\|1w7s]], [[1jby\|1jby]], [[1q4d\|1q4d]], [[1kys\|1kys]], [[1f0b\|1f0b]], [[1c4f\|1c4f]], [[1h6r\|1h6r]], [[1jc1\|1jc1]], [[1q4a\|1q4a]], [[1eml\|1eml]], [[1w7t\|1w7t]], [[1qyo\|1qyo]], [[1emk\|1emk]], [[2emo\|2emo]], [[1bfp\|1bfp]], [[1huy\|1huy]], [[1q4b\|1q4b]], [[1w7u\|1w7u]], [[1hcj\|1hcj]], [[1yjf\|1yjf]], [[1emc\|1emc]], [[1q4c\|1q4c]], [[1yfp\|1yfp]], [[1emf\|1emf]], [[1yj2\|1yj2]], [[2ah8\|2ah8]], [[1kyp\|1kyp]], [[1yhi\|1yhi]], [[1z1q\|1z1q]], [[1eme\|1eme]], [[1qyf\|1qyf]], [[2wsn\|2wsn]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wso OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wso RCSB], [http://www.ebi.ac.uk/pdbsum/2wso PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wso OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wso RCSB], [http://www.ebi.ac.uk/pdbsum/2wso PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Aequorea victoria]]		[[Category: Aequorea victoria]]
-	[[Category: Bourgeois, D.]]	+	[[Category: Bourgeois, D]]
-	[[Category: Chazal, R.]]	+	[[Category: Chazal, R]]
-	[[Category: Field, M J.]]	+	[[Category: Field, M J]]
-	[[Category: Lazareno-Saez, C.]]	+	[[Category: Lazareno-Saez, C]]
-	[[Category: Lelimousin, M.]]	+	[[Category: Lelimousin, M]]
-	[[Category: Macheboeuf, P.]]	+	[[Category: Macheboeuf, P]]
-	[[Category: Noirclerc-Savoye, M.]]	+	[[Category: Noirclerc-Savoye, M]]
-	[[Category: Paetzold, B.]]	+	[[Category: Paetzold, B]]
-	[[Category: Royant, A.]]	+	[[Category: Royant, A]]
-	[[Category: Vot, S Le.]]	+	[[Category: Vot, S Le]]
	[[Category: Chromophore]]		[[Category: Chromophore]]
	[[Category: Fluorescent protein]]		[[Category: Fluorescent protein]]
	[[Category: Luminescence]]		[[Category: Luminescence]]
	[[Category: Photoprotein]]		[[Category: Photoprotein]]

OCA at 05:35, 3 October 2014

2014-10-03T05:35:29Z

←Older revision		Revision as of 05:35, 3 October 2014
Line 1:		Line 1:
-	[[~~Image:~~2wso.~~png~~\|~~left~~\|200px]]	+	==STRUCTURE OF CERULEAN FLUORESCENT PROTEIN AT PHYSIOLOGICAL PH==
		+	<StructureSection load='2wso' size='340' side='right' caption='[[2wso]], [[Resolution\|resolution]] 1.15Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2wso]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WSO FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRF:[(4Z)-2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(1H-INDOL-3-YLMETHYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC+ACID'>CRF</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1cv7\|1cv7]], [[1gfl\|1gfl]], [[2emn\|2emn]], [[1jc0\|1jc0]], [[1qyq\|1qyq]], [[1rm9\|1rm9]], [[2fzu\|2fzu]], [[1ema\|1ema]], [[1rmo\|1rmo]], [[1f09\|1f09]], [[1yhg\|1yhg]], [[1kp5\|1kp5]], [[1q73\|1q73]], [[1jbz\|1jbz]], [[2b3q\|2b3q]], [[1z1p\|1z1p]], [[1kyr\|1kyr]], [[1yhh\|1yhh]], [[2aha\|2aha]], [[1rmm\|1rmm]], [[2b3p\|2b3p]], [[1emm\|1emm]], [[2fwq\|2fwq]], [[1rrx\|1rrx]], [[1qxt\|1qxt]], [[1myw\|1myw]], [[1emg\|1emg]], [[1rmp\|1rmp]], [[1qy3\|1qy3]], [[2yfp\|2yfp]], [[1emb\|1emb]], [[1q4e\|1q4e]], [[2emd\|2emd]], [[1b9c\|1b9c]], [[1w7s\|1w7s]], [[1jby\|1jby]], [[1q4d\|1q4d]], [[1kys\|1kys]], [[1f0b\|1f0b]], [[1c4f\|1c4f]], [[1h6r\|1h6r]], [[1jc1\|1jc1]], [[1q4a\|1q4a]], [[1eml\|1eml]], [[1w7t\|1w7t]], [[1qyo\|1qyo]], [[1emk\|1emk]], [[2emo\|2emo]], [[1bfp\|1bfp]], [[1huy\|1huy]], [[1q4b\|1q4b]], [[1w7u\|1w7u]], [[1hcj\|1hcj]], [[1yjf\|1yjf]], [[1emc\|1emc]], [[1q4c\|1q4c]], [[1yfp\|1yfp]], [[1emf\|1emf]], [[1yj2\|1yj2]], [[2ah8\|2ah8]], [[1kyp\|1kyp]], [[1yhi\|1yhi]], [[1z1q\|1z1q]], [[1eme\|1eme]], [[1qyf\|1qyf]], [[2wsn\|2wsn]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wso FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wso OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wso RCSB], [http://www.ebi.ac.uk/pdbsum/2wso PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ws/2wso_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Enhanced Cyan Fluorescent Protein (ECFP) and its variant Cerulean are genetically-encoded fluorophores widely used as donors in FRET-based cell imaging experiments. First, we have confirmed through denaturation experiments that the double-peak spectroscopic signature of these fluorescent proteins originates from the indole ring of the chromophore. Then, to explain the improvement in the fluorescence properties of Cerulean when compared to ECFP, we have determined the high-resolution crystal structures of these two proteins at physiological pH, and performed molecular dynamics simulations. In both proteins, the N-terminal half of the seventh strand exhibits two conformations that have a complex set of van der Waals interactions with the chromophore and that our simulations suggest interconvert on the nanosecond timescale. The Y145A and H148D mutations in Cerulean stabilize these interactions and allow the chromophore to be more planar, better stabilized and less prone to collisional quenching, albeit only intermittently. As a consequence, the probability of non-radiative decay is significantly decreased. Our results highlight the considerable dynamical flexibility that exists in the vicinity of the tryptophan-based chromophore of these engineered fluorescent proteins, and provide insights which should allow the design of mutants with enhanced optical properties.

-	~~{{STRUCTURE_2wso\| PDB=2wso \| SCENE= }}~~	+	Intrinsic dynamics in ECFP and Cerulean control fluorescence quantum yield.,Lelimousin M, Noirclerc-Savoye M, Lazareno-Saez C, Paetzold B, Le Vot S, Chazal R, Macheboeuf P, Field MJ, Bourgeois D, Royant A Biochemistry. 2009 Sep 15. PMID:19754158<ref>PMID:19754158</ref>

-	~~===STRUCTURE OF CERULEAN FLUORESCENT PROTEIN AT PHYSIOLOGICAL PH===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_19754158}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[2wso]] is~~ a ~~1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Aequorea_victoria Aequorea victoria]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA].~~	+

	==See Also==		==See Also==
-	*[[Alyssa Marsico/Sandbox 1\|Alyssa Marsico/Sandbox 1]]
-	*[[Devon McCarthy/Sandbox 1\|Devon McCarthy/Sandbox 1]]
	*[[Green Fluorescent Protein\|Green Fluorescent Protein]]		*[[Green Fluorescent Protein\|Green Fluorescent Protein]]
-	*[[Sandbox104\|Sandbox104]]	+	== References ==
-	*[[User:Joanne Lau/Sandbox 5\|User:Joanne Lau/Sandbox 5]]	+	<references/>
-		+	__TOC__
-	==~~Reference~~==	+	</StructureSection>
-	<~~ref group="xtra">PMID:019754158<~~/~~ref~~><~~ref group="xtra">PMID:017685554</ref><references group="xtra"~~/>	+
	[[Category: Aequorea victoria]]		[[Category: Aequorea victoria]]
	[[Category: Bourgeois, D.]]		[[Category: Bourgeois, D.]]

OCA at 14:37, 20 October 2012

2012-10-20T14:37:53Z

←Older revision		Revision as of 14:37, 20 October 2012
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	==About this Structure==		==About this Structure==
-	[[2wso]] is a 1 chain structure ~~of [[Alyssa Marsico/Sandbox 1]], [[Devon McCarthy/Sandbox 1]], [[Green Fluorescent Protein]], [[Sandbox104]] and [[User:Joanne Lau/Sandbox 5]]~~ with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA].	+	[[2wso]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA].

	==See Also==		==See Also==

OCA at 15:45, 26 July 2012

2012-07-26T15:45:06Z

←Older revision		Revision as of 15:45, 26 July 2012
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	[[Image:2wso.png\|left\|200px]]		[[Image:2wso.png\|left\|200px]]

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	{{STRUCTURE_2wso\| PDB=2wso \| SCENE= }}		{{STRUCTURE_2wso\| PDB=2wso \| SCENE= }}

	===STRUCTURE OF CERULEAN FLUORESCENT PROTEIN AT PHYSIOLOGICAL PH===		===STRUCTURE OF CERULEAN FLUORESCENT PROTEIN AT PHYSIOLOGICAL PH===

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	{{ABSTRACT_PUBMED_19754158}}		{{ABSTRACT_PUBMED_19754158}}

	==About this Structure==		==About this Structure==
-	[[2wso]] is a 1 chain structure of [[Green Fluorescent Protein]] with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA].	+	[[2wso]] is a 1 chain structure of [[Alyssa Marsico/Sandbox 1]], [[Devon McCarthy/Sandbox 1]], [[Green Fluorescent Protein]], [[Sandbox104]] and [[User:Joanne Lau/Sandbox 5]] with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WSO OCA].

	==See Also==		==See Also==
-	*[[Green Fluorescent Protein]]	+	*[[Alyssa Marsico/Sandbox 1\|Alyssa Marsico/Sandbox 1]]
		+	*[[Devon McCarthy/Sandbox 1\|Devon McCarthy/Sandbox 1]]
		+	*[[Green Fluorescent Protein\|Green Fluorescent Protein]]
		+	*[[Sandbox104\|Sandbox104]]
		+	*[[User:Joanne Lau/Sandbox 5\|User:Joanne Lau/Sandbox 5]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~19754158~~</ref><ref group="xtra">PMID:~~17685554~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:019754158</ref><ref group="xtra">PMID:017685554</ref><references group="xtra"/>
	[[Category: Aequorea victoria]]		[[Category: Aequorea victoria]]
	[[Category: Bourgeois, D.]]		[[Category: Bourgeois, D.]]

OCA: Protected "2wso" [edit=sysop:move=sysop]

2011-03-14T22:46:01Z

Protected "2wso" [edit=sysop:move=sysop]

←Older revision

Revision as of 22:46, 14 March 2011