2xyb - Revision history

OCA at 08:05, 23 August 2023

2023-08-23T08:05:42Z

←Older revision		Revision as of 08:05, 23 August 2023
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	<StructureSection load='2xyb' size='340' side='right'caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>		<StructureSection load='2xyb' size='340' side='right'caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Pycnoporus_cinnabarinus Pycnoporus cinnabarinus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XYB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trametes_cinnabarina Trametes cinnabarina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XYB FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene~~>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.75Å</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Laccase Laccase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [https://pdbe.org/2xyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [https://www.ebi.ac.uk/pdbsum/2xyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xyb ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [https://pdbe.org/2xyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [https://www.ebi.ac.uk/pdbsum/2xyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xyb ProSAT]</span></td></tr>
	</table>		</table>
-	~~<div style~~=~~"background-color:#fffaf0;">~~	+	== Function ==
-	=~~= Publication Abstract from PubMed~~ ==	+	[https://www.uniprot.org/uniprot/Q9UVQ2_PYCCI Q9UVQ2_PYCCI]
-	Laccase isozymes from the white-rot basidiomycete fungi Trametes versicolor and Pycnoporus cinnabarinus were purified to apparent iso-electric homogeneity and crystallised. T. versicolor laccase crystallises in two crystal forms, both with the orthorhombic space group P2(1)2(1)2(1), which diffract to 1.9 and 2.95 A resolution, respectively. The crystals of P. cinnabarinus laccase belong to the monoclinic space group C2 and diffract to at least 2.2 A resolution. All the laccase crystals are suitable for X-ray structure determination and contain a full complement of copper ions.	+
-		+
-	Purification, crystallisation and X-ray diffraction study of fully functional laccases from two ligninolytic fungi.,Antorini M, Herpoel-Gimbert I, Choinowski T, Sigoillot JC, Asther M, Winterhalter K, Piontek K Biochim Biophys Acta. 2002 Jan 31;1594(1):~~109-14. PMID:11825613<ref>PMID:11825613<~~/~~ref>~~	+
-		+
-	~~From MEDLINE®~~/~~PubMed®, a database of the U~~.S. ~~National Library of Medicine.<br>~~	+
-	</~~div>~~	+
-	~~<div class="pdbe-citations 2xyb" style="background-color:#fffaf0;"><~~/~~div>~~	+

	==See Also==		==See Also==
	*[[Laccase 3D structures\|Laccase 3D structures]]		*[[Laccase 3D structures\|Laccase 3D structures]]
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Laccase]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Pycnoporus cinnabarinus~~]]	+	[[Category: Trametes cinnabarina]]
-	[[Category: Antorini, M]]	+	[[Category: Antorini M]]
-	[[Category: Asther, M]]	+	[[Category: Asther M]]
-	[[Category: Choinowski, T]]	+	[[Category: Choinowski T]]
-	[[Category: Herpoel-Gimbert, I]]	+	[[Category: Herpoel-Gimbert I]]
-	[[Category: Piontek, K]]	+	[[Category: Piontek K]]
-	[[Category: Plattner~~, D A~~]]	+	[[Category: Plattner DA]]
-	[[Category: Sigoillot~~, J C~~]]	+	[[Category: Sigoillot JC]]
-	[[Category: Winterhalter, K]]	+	[[Category: Winterhalter K]]
-	~~[[Category: Blue multi-copper oxidase]]~~	+
-	~~[[Category: Lignin degradation]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Phenol oxidase~~]]	+

OCA at 14:56, 17 November 2021

2021-11-17T14:56:29Z

←Older revision		Revision as of 14:56, 17 November 2021
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	<StructureSection load='2xyb' size='340' side='right'caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>		<StructureSection load='2xyb' size='340' side='right'caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Pycnoporus_cinnabarinus Pycnoporus cinnabarinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2XYB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pycnoporus_cinnabarinus Pycnoporus cinnabarinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XYB FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL~~</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN~~</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Laccase Laccase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Laccase Laccase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [~~http~~://pdbe.org/2xyb PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2xyb PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2xyb ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [https://pdbe.org/2xyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [https://www.ebi.ac.uk/pdbsum/2xyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xyb ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 11:03, 17 July 2019

2019-07-17T11:03:05Z

←Older revision		Revision as of 11:03, 17 July 2019
Line 1:		Line 1:

	==CRYSTAL STRUCTURE OF A FULLY FUNCTIONAL LACCASE FROM THE LIGNINOLYTIC FUNGUS PYCNOPORUS CINNABARINUS==		==CRYSTAL STRUCTURE OF A FULLY FUNCTIONAL LACCASE FROM THE LIGNINOLYTIC FUNGUS PYCNOPORUS CINNABARINUS==
-	<StructureSection load='2xyb' size='340' side='right' caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>	+	<StructureSection load='2xyb' size='340' side='right'caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pycnoporus_cinnabarinus Pycnoporus cinnabarinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XYB FirstGlance]. <br>		<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pycnoporus_cinnabarinus Pycnoporus cinnabarinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XYB FirstGlance]. <br>
Line 17:		Line 17:
	</div>		</div>
	<div class="pdbe-citations 2xyb" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 2xyb" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Laccase 3D structures\|Laccase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 22:		Line 25:
	</StructureSection>		</StructureSection>
	[[Category: Laccase]]		[[Category: Laccase]]
		+	[[Category: Large Structures]]
	[[Category: Pycnoporus cinnabarinus]]		[[Category: Pycnoporus cinnabarinus]]
	[[Category: Antorini, M]]		[[Category: Antorini, M]]

OCA at 09:29, 10 October 2018

2018-10-10T09:29:55Z

←Older revision		Revision as of 09:29, 10 October 2018
Line 3:		Line 3:
	<StructureSection load='2xyb' size='340' side='right' caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>		<StructureSection load='2xyb' size='340' side='right' caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Trametes_cinnabarina Trametes cinnabarina~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XYB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pycnoporus_cinnabarinus Pycnoporus cinnabarinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XYB FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN~~</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN~~</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Laccase Laccase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Laccase Laccase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [http://pdbe.org/2xyb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [http://www.ebi.ac.uk/pdbsum/2xyb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xyb ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [http://pdbe.org/2xyb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [http://www.ebi.ac.uk/pdbsum/2xyb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xyb ProSAT]</span></td></tr>
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Laccase]]		[[Category: Laccase]]
-	[[Category: ~~Trametes cinnabarina~~]]	+	[[Category: Pycnoporus cinnabarinus]]
	[[Category: Antorini, M]]		[[Category: Antorini, M]]
	[[Category: Asther, M]]		[[Category: Asther, M]]

OCA at 10:11, 5 August 2016

2016-08-05T10:11:24Z

←Older revision		Revision as of 10:11, 5 August 2016
Line 1:		Line 1:
		+
	==CRYSTAL STRUCTURE OF A FULLY FUNCTIONAL LACCASE FROM THE LIGNINOLYTIC FUNGUS PYCNOPORUS CINNABARINUS==		==CRYSTAL STRUCTURE OF A FULLY FUNCTIONAL LACCASE FROM THE LIGNINOLYTIC FUNGUS PYCNOPORUS CINNABARINUS==
	<StructureSection load='2xyb' size='340' side='right' caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>		<StructureSection load='2xyb' size='340' side='right' caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pycnoporus_cinnabarinus Pycnoporus cinnabarinus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XYB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Trametes_cinnabarina Trametes cinnabarina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XYB FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Laccase Laccase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Laccase Laccase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [http://www.ebi.ac.uk/pdbsum/2xyb PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [http://pdbe.org/2xyb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [http://www.ebi.ac.uk/pdbsum/2xyb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xyb ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 15:		Line 16:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2xyb" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
Line 20:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Laccase]]		[[Category: Laccase]]
-	[[Category: ~~Pycnoporus cinnabarinus~~]]	+	[[Category: Trametes cinnabarina]]
	[[Category: Antorini, M]]		[[Category: Antorini, M]]
	[[Category: Asther, M]]		[[Category: Asther, M]]

OCA at 01:29, 25 December 2014

2014-12-25T01:29:03Z

←Older revision		Revision as of 01:29, 25 December 2014
Line 2:		Line 2:
	<StructureSection load='2xyb' size='340' side='right' caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>		<StructureSection load='2xyb' size='340' side='right' caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pycnoporus_cinnabarinus Pycnoporus cinnabarinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. <br>	+	<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pycnoporus_cinnabarinus Pycnoporus cinnabarinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XYB FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/~~Glucokinase Glucokinase~~], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Laccase Laccase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [http://www.ebi.ac.uk/pdbsum/2xyb PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [http://www.ebi.ac.uk/pdbsum/2xyb PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 13:		Line 13:
	Purification, crystallisation and X-ray diffraction study of fully functional laccases from two ligninolytic fungi.,Antorini M, Herpoel-Gimbert I, Choinowski T, Sigoillot JC, Asther M, Winterhalter K, Piontek K Biochim Biophys Acta. 2002 Jan 31;1594(1):109-14. PMID:11825613<ref>PMID:11825613</ref>		Purification, crystallisation and X-ray diffraction study of fully functional laccases from two ligninolytic fungi.,Antorini M, Herpoel-Gimbert I, Choinowski T, Sigoillot JC, Asther M, Winterhalter K, Piontek K Biochim Biophys Acta. 2002 Jan 31;1594(1):109-14. PMID:11825613<ref>PMID:11825613</ref>

-	From ~~MEDLINEÂ®~~/~~PubMedÂ®~~, a database of the U.S. National Library of Medicine.<br>	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
	== References ==		== References ==
Line 21:		Line 21:
	[[Category: Laccase]]		[[Category: Laccase]]
	[[Category: Pycnoporus cinnabarinus]]		[[Category: Pycnoporus cinnabarinus]]
-	[[Category: Antorini, M.]]	+	[[Category: Antorini, M]]
-	[[Category: Asther, M.]]	+	[[Category: Asther, M]]
-	[[Category: Choinowski, T.]]	+	[[Category: Choinowski, T]]
-	[[Category: Herpoel-Gimbert, I.]]	+	[[Category: Herpoel-Gimbert, I]]
-	[[Category: Piontek, K.]]	+	[[Category: Piontek, K]]
-	[[Category: Plattner, D A.]]	+	[[Category: Plattner, D A]]
-	[[Category: Sigoillot, J C.]]	+	[[Category: Sigoillot, J C]]
-	[[Category: Winterhalter, K.]]	+	[[Category: Winterhalter, K]]
	[[Category: Blue multi-copper oxidase]]		[[Category: Blue multi-copper oxidase]]
	[[Category: Lignin degradation]]		[[Category: Lignin degradation]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
	[[Category: Phenol oxidase]]		[[Category: Phenol oxidase]]

OCA at 07:47, 14 May 2014

2014-05-14T07:47:28Z

←Older revision		Revision as of 07:47, 14 May 2014
Line 1:		Line 1:
-	[[~~Image:~~2xyb.~~png~~\|~~left\|200px~~]]	+	==CRYSTAL STRUCTURE OF A FULLY FUNCTIONAL LACCASE FROM THE LIGNINOLYTIC FUNGUS PYCNOPORUS CINNABARINUS==
		+	<StructureSection load='2xyb' size='340' side='right' caption='[[2xyb]], [[Resolution\|resolution]] 1.75Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2xyb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pycnoporus_cinnabarinus Pycnoporus cinnabarinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=AS8:ACETYLSULFATE'>AS8</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PER:PEROXIDE+ION'>PER</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene><br>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xyb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2xyb RCSB], [http://www.ebi.ac.uk/pdbsum/2xyb PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Laccase isozymes from the white-rot basidiomycete fungi Trametes versicolor and Pycnoporus cinnabarinus were purified to apparent iso-electric homogeneity and crystallised. T. versicolor laccase crystallises in two crystal forms, both with the orthorhombic space group P2(1)2(1)2(1), which diffract to 1.9 and 2.95 A resolution, respectively. The crystals of P. cinnabarinus laccase belong to the monoclinic space group C2 and diffract to at least 2.2 A resolution. All the laccase crystals are suitable for X-ray structure determination and contain a full complement of copper ions.

-	<!--	+	Purification, crystallisation and X-ray diffraction study of fully functional laccases from two ligninolytic fungi.,Antorini M, Herpoel-Gimbert I, Choinowski T, Sigoillot JC, Asther M, Winterhalter K, Piontek K Biochim Biophys Acta. 2002 Jan 31;1594(1):109-14. PMID:11825613<ref>PMID:11825613</ref>
-	~~The line below this paragraph~~, ~~containing "STRUCTURE_2xyb"~~, ~~creates the "Structure Box" on the page~~.	+
-	~~You may change the PDB parameter~~ (~~which sets the PDB file loaded into the applet~~)	+
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+
-	~~or leave the SCENE parameter empty for the default display.~~	+
-	-->	+
-	~~{{STRUCTURE_2xyb\| PDB=2xyb \| SCENE= }}~~	+

-	~~===CRYSTAL STRUCTURE OF A FULLY FUNCTIONAL LACCASE FROM THE LIGNINOLYTIC FUNGUS PYCNOPORUS CINNABARINUS===~~	+	From MEDLINEÂ®/PubMedÂ®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-		+	== References ==
-	~~<!--~~	+	<references/>
-	~~The line below this paragraph~~, ~~{{ABSTRACT_PUBMED_11825613}}, adds~~ the ~~Publication Abstract to the page~~	+	__TOC__
-	~~(as it appears on PubMed at http://www~~.~~pubmed~~.~~gov), where 11825613 is the PubMed ID number~~.	+	</StructureSection>
-	-->	+
-	~~{{ABSTRACT_PUBMED_11825613}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[2xyb]] is a 1 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Pycnoporus_cinnabarinus Pycnoporus cinnabarinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA].~~	+
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:011825613<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Laccase]]		[[Category: Laccase]]
	[[Category: Pycnoporus cinnabarinus]]		[[Category: Pycnoporus cinnabarinus]]

OCA at 08:07, 7 December 2011

2011-12-07T08:07:58Z

←Older revision		Revision as of 08:07, 7 December 2011
Line 1:		Line 1:
-	[[Image:2xyb.~~jpg~~\|left\|200px]]	+	[[Image:2xyb.png\|left\|200px]]

	<!--		<!--

OCA: Protected "2xyb" [edit=sysop:move=sysop]

2011-11-30T06:23:54Z

Protected "2xyb" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:23, 30 November 2011

OCA at 06:23, 30 November 2011

2011-11-30T06:23:50Z

←Older revision		Revision as of 06:23, 30 November 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:2xyb.jpg\|left\|200px]]

-	The ~~entry 2xyb~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_2xyb", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_2xyb\| PDB=2xyb \| SCENE= }}

-	~~Authors: Piontek, K., Choinowski, T., Antorini, M., Herpoel-Gimbert, I., Plattner, D.~~A~~., Sigoillot, J.C., Asther, M., Winterhalter, K.~~	+	===CRYSTAL STRUCTURE OF A FULLY FUNCTIONAL LACCASE FROM THE LIGNINOLYTIC FUNGUS PYCNOPORUS CINNABARINUS===

-	Description: Crystal structure of a fully functional laccase from the ligninolytic fungus pycnoporus cinnabarinus

-	~~''Page seeded by~~ [http://oca.weizmann.ac.il/oca OCA ] ~~on Wed Dec 1 11~~:06:~~58 2010''~~	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_11825613}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 11825613 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_11825613}}
		+
		+	==About this Structure==
		+	[[2xyb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pycnoporus_cinnabarinus Pycnoporus cinnabarinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XYB OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:011825613</ref><references group="xtra"/>
		+	[[Category: Laccase]]
		+	[[Category: Pycnoporus cinnabarinus]]
		+	[[Category: Antorini, M.]]
		+	[[Category: Asther, M.]]
		+	[[Category: Choinowski, T.]]
		+	[[Category: Herpoel-Gimbert, I.]]
		+	[[Category: Piontek, K.]]
		+	[[Category: Plattner, D A.]]
		+	[[Category: Sigoillot, J C.]]
		+	[[Category: Winterhalter, K.]]
		+	[[Category: Blue multi-copper oxidase]]
		+	[[Category: Lignin degradation]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Phenol oxidase]]