2ynz - Revision history

OCA at 10:56, 20 December 2023

2023-12-20T10:56:52Z

←Older revision		Revision as of 10:56, 20 December 2023
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	<StructureSection load='2ynz' size='340' side='right'caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='2ynz' size='340' side='right'caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Salty Salty~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae] and [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.4Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</~~div~~></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ynz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynz OCA], [https://pdbe.org/2ynz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ynz RCSB], [https://www.ebi.ac.uk/pdbsum/2ynz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ynz ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ynz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynz OCA], [https://pdbe.org/2ynz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ynz RCSB], [https://www.ebi.ac.uk/pdbsum/2ynz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ynz ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/GCN4_YEAST GCN4_YEAST]] Is a transcription factor that is responsible for the activation of more than 30 genes required for amino acid or for purine biosynthesis in response to amino acid or purine starvation. Binds and recognize the DNA sequence: 5'-TGA[CG]TCA-3'.	+	[https://www.uniprot.org/uniprot/SADA_SALTY SADA_SALTY] Involved in cell aggregation, biofilm formation, and adhesion to human intestinal epithelial cells.<ref>PMID:21859856</ref> [https://www.uniprot.org/uniprot/GCN4_YEAST GCN4_YEAST] Is a transcription factor that is responsible for the activation of more than 30 genes required for amino acid or for purine biosynthesis in response to amino acid or purine starvation. Binds and recognize the DNA sequence: 5'-TGA[CG]TCA-3'.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	==See Also==		==See Also==
		+	*[[Gcn4 3D Structures\|Gcn4 3D Structures]]
	*[[Gnc4 3D Structures\|Gnc4 3D Structures]]		*[[Gnc4 3D Structures\|Gnc4 3D Structures]]
	== References ==		== References ==
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Salty~~]]	+	[[Category: Saccharomyces cerevisiae]]
-	[[Category: ~~Alvarez, B Hernandez~~]]	+	[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
-	[[Category: Hartmann~~, M D~~]]	+	[[Category: Hartmann MD]]
-	[[Category: ~~Lupas, A N~~]]	+	[[Category: Hernandez Alvarez B]]
-	[[Category: ~~Dall domain]]~~	+	[[Category: Lupas AN]]
-	~~[[Category: Dall2]]~~	+
-	~~[[Category: Membrane protein]]~~	+
-	~~[[Category: Taa]]~~	+
-	~~[[Category: Trimeric autotransporter adhesin~~]]	+

OCA at 07:45, 29 June 2022

2022-06-29T07:45:31Z

←Older revision		Revision as of 07:45, 29 June 2022
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	<StructureSection load='2ynz' size='340' side='right'caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='2ynz' size='340' side='right'caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=2ynz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynz OCA], [~~http~~://pdbe.org/2ynz PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2ynz RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2ynz PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2ynz ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ynz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynz OCA], [https://pdbe.org/2ynz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ynz RCSB], [https://www.ebi.ac.uk/pdbsum/2ynz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ynz ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/GCN4_YEAST GCN4_YEAST]] Is a transcription factor that is responsible for the activation of more than 30 genes required for amino acid or for purine biosynthesis in response to amino acid or purine starvation. Binds and recognize the DNA sequence: 5'-TGA[CG]TCA-3'.	+	[[https://www.uniprot.org/uniprot/GCN4_YEAST GCN4_YEAST]] Is a transcription factor that is responsible for the activation of more than 30 genes required for amino acid or for purine biosynthesis in response to amino acid or purine starvation. Binds and recognize the DNA sequence: 5'-TGA[CG]TCA-3'.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 11:51, 23 September 2020

2020-09-23T11:51:00Z

←Older revision		Revision as of 11:51, 23 September 2020
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	==Salmonella enterica SadA 823-947 fused to a GCN4 adaptor (SadAK5)==		==Salmonella enterica SadA 823-947 fused to a GCN4 adaptor (SadAK5)==
-	<StructureSection load='2ynz' size='340' side='right' caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>	+	<StructureSection load='2ynz' size='340' side='right'caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ynz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynz OCA], [http://pdbe.org/2ynz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ynz RCSB], [http://www.ebi.ac.uk/pdbsum/2ynz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ynz ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2ynz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynz OCA], [http://pdbe.org/2ynz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ynz RCSB], [http://www.ebi.ac.uk/pdbsum/2ynz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ynz ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 21:		Line 21:

	==See Also==		==See Also==
-	*[[~~Gcn4~~\|~~Gcn4~~]]	+	*[[Gnc4 3D Structures\|Gnc4 3D Structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Salty]]		[[Category: Salty]]
	[[Category: Alvarez, B Hernandez]]		[[Category: Alvarez, B Hernandez]]

OCA at 10:02, 19 December 2018

2018-12-19T10:02:44Z

←Older revision		Revision as of 10:02, 19 December 2018
Line 3:		Line 3:
	<StructureSection load='2ynz' size='340' side='right' caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='2ynz' size='340' side='right' caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</td></tr>
Line 26:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Salty]]
	[[Category: Alvarez, B Hernandez]]		[[Category: Alvarez, B Hernandez]]
	[[Category: Hartmann, M D]]		[[Category: Hartmann, M D]]

OCA at 13:18, 15 March 2017

2017-03-15T13:18:57Z

←Older revision		Revision as of 13:18, 15 March 2017
Line 3:		Line 3:
	<StructureSection load='2ynz' size='340' side='right' caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='2ynz' size='340' side='right' caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure ~~with sequence from [http://en.wikipedia.org/wiki/Salty Salty]~~. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</td></tr>
Line 26:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Salty]]
	[[Category: Alvarez, B Hernandez]]		[[Category: Alvarez, B Hernandez]]
	[[Category: Hartmann, M D]]		[[Category: Hartmann, M D]]

OCA at 09:26, 4 August 2016

2016-08-04T09:26:07Z

←Older revision		Revision as of 09:26, 4 August 2016
Line 1:		Line 1:
		+
	==Salmonella enterica SadA 823-947 fused to a GCN4 adaptor (SadAK5)==		==Salmonella enterica SadA 823-947 fused to a GCN4 adaptor (SadAK5)==
	<StructureSection load='2ynz' size='340' side='right' caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='2ynz' size='340' side='right' caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ynz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ynz RCSB], [http://www.ebi.ac.uk/pdbsum/2ynz PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ynz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynz OCA], [http://pdbe.org/2ynz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ynz RCSB], [http://www.ebi.ac.uk/pdbsum/2ynz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ynz ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 2ynz" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 07:49, 25 December 2014

2014-12-25T07:49:08Z

←Older revision		Revision as of 07:49, 25 December 2014
Line 2:		Line 2:
	<StructureSection load='2ynz' size='340' side='right' caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>		<StructureSection load='2ynz' size='340' side='right' caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ynz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ynz RCSB], [http://www.ebi.ac.uk/pdbsum/2ynz PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ynz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ynz RCSB], [http://www.ebi.ac.uk/pdbsum/2ynz PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/GCN4_YEAST GCN4_YEAST]] Is a transcription factor that is responsible for the activation of more than 30 genes required for amino acid or for purine biosynthesis in response to amino acid or purine starvation. Binds and recognize the DNA sequence: 5'-TGA[CG]TCA-3'.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 15:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+
		+	==See Also==
		+	*[[Gcn4\|Gcn4]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Alvarez, B Hernandez.]]	+	[[Category: Salty]]
-	[[Category: Hartmann, M D.]]	+	[[Category: Alvarez, B Hernandez]]
-	[[Category: Lupas, A N.]]	+	[[Category: Hartmann, M D]]
		+	[[Category: Lupas, A N]]
	[[Category: Dall domain]]		[[Category: Dall domain]]
	[[Category: Dall2]]		[[Category: Dall2]]

OCA at 11:58, 29 October 2014

2014-10-29T11:58:58Z

←Older revision		Revision as of 11:58, 29 October 2014
Line 1:		Line 1:
-	[[~~Image:~~2ynz.~~png~~\|~~left~~\|~~200px~~]]	+	==Salmonella enterica SadA 823-947 fused to a GCN4 adaptor (SadAK5)==
		+	<StructureSection load='2ynz' size='340' side='right' caption='[[2ynz]], [[Resolution\|resolution]] 1.40Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[2ynz]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YNZ FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[1ce9\|1ce9]], [[1dgc\|1dgc]], [[1fav\|1fav]], [[1fmh\|1fmh]], [[1gcl\|1gcl]], [[1gcm\|1gcm]], [[1gk6\|1gk6]], [[1gzl\|1gzl]], [[1ihq\|1ihq]], [[1ij0\|1ij0]], [[1ij1\|1ij1]], [[1ij2\|1ij2]], [[1ij3\|1ij3]], [[1kql\|1kql]], [[1ld4\|1ld4]], [[1llm\|1llm]], [[1nkn\|1nkn]], [[1piq\|1piq]], [[1rb1\|1rb1]], [[1rb4\|1rb4]], [[1rb5\|1rb5]], [[1rb6\|1rb6]], [[1swi\|1swi]], [[1tmz\|1tmz]], [[1unt\|1unt]], [[1unu\|1unu]], [[1unv\|1unv]], [[1unw\|1unw]], [[1unx\|1unx]], [[1uny\|1uny]], [[1unz\|1unz]], [[1uo0\|1uo0]], [[1uo1\|1uo1]], [[1uo2\|1uo2]], [[1uo3\|1uo3]], [[1uo4\|1uo4]], [[1uo5\|1uo5]], [[1w5g\|1w5g]], [[1w5h\|1w5h]], [[1w5i\|1w5i]], [[1w5j\|1w5j]], [[1w5k\|1w5k]], [[1w5l\|1w5l]], [[1ysa\|1ysa]], [[1zii\|1zii]], [[1zij\|1zij]], [[1zik\|1zik]], [[1zil\|1zil]], [[1zim\|1zim]], [[1zta\|1zta]], [[2b1f\|2b1f]], [[2b22\|2b22]], [[2bni\|2bni]], [[2cce\|2cce]], [[2ccf\|2ccf]], [[2ccn\|2ccn]], [[2d3e\|2d3e]], [[2dgc\|2dgc]], [[2wg5\|2wg5]], [[2wg6\|2wg6]], [[2wpq\|2wpq]], [[2wpr\|2wpr]], [[2wps\|2wps]], [[2wpy\|2wpy]], [[2wpz\|2wpz]], [[2wq0\|2wq0]], [[2wq1\|2wq1]], [[2wq2\|2wq2]], [[2wq3\|2wq3]], [[2zta\|2zta]], [[2yny\|2yny]], [[2yo0\|2yo0]], [[2yo1\|2yo1]], [[2yo2\|2yo2]], [[2yo3\|2yo3]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ynz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ynz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ynz RCSB], [http://www.ebi.ac.uk/pdbsum/2ynz PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Trimeric autotransporter adhesins (TAAs) are modular, highly repetitive surface proteins that mediate adhesion to host cells in a broad range of Gram-negative pathogens. Although their sizes may differ by more than one order of magnitude, they all follow the same basic head-stalk-anchor architecture, where the head mediates adhesion and autoagglutination, the stalk projects the head from the bacterial surface, and the anchor provides the export function and attaches the adhesin to the bacterial outer membrane after export is complete. In complex adhesins, head and stalk domains may alternate several times before the anchor is reached. Despite extensive sequence divergence, the structures of TAA domains are highly constrained, due to the tight interleaving of their constituent polypeptide chains. We have therefore taken a "domain dictionary" approach to characterize representatives for each domain type by X-ray crystallography and use these structures to reconstruct complete TAA fibers. With SadA from Salmonella enterica, EhaG from enteropathogenic Escherichia coli (EHEC), and UpaG from uropathogenic E. coli (UPEC), we present three representative structures of a complex adhesin that occur in a conserved genomic context in Enterobacteria and is essential in the infection process of uropathogenic E. coli. Our work proves the applicability of the dictionary approach to understanding the structure of a class of proteins that are otherwise poorly tractable by high-resolution methods and provides a basis for the rapid and detailed annotation of newly identified TAAs.

-	~~{{STRUCTURE_2ynz\| PDB=2ynz \| SCENE= }}~~	+	Complete fiber structures of complex trimeric autotransporter adhesins conserved in enterobacteria.,Hartmann MD, Grin I, Dunin-Horkawicz S, Deiss S, Linke D, Lupas AN, Hernandez Alvarez B Proc Natl Acad Sci U S A. 2012 Dec 18;109(51):20907-12. doi:, 10.1073/pnas.1211872110. Epub 2012 Dec 3. PMID:23213248<ref>PMID:23213248</ref>

-	~~===Salmonella enterica SadA 823-947 fused to~~ a ~~GCN4 adaptor (SadAK5)===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_23213248}}~~	+	== References ==
-		+	<references/>
-	==~~About this Structure~~==	+	__TOC__
-	~~[[2ynz]] is a 3 chain structure. Full crystallographic information is available from [http:~~//~~oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA].~~	+	</StructureSection>
	[[Category: Alvarez, B Hernandez.]]		[[Category: Alvarez, B Hernandez.]]
	[[Category: Hartmann, M D.]]		[[Category: Hartmann, M D.]]

OCA at 08:08, 9 January 2013

2013-01-09T08:08:30Z

←Older revision		Revision as of 08:08, 9 January 2013
Line 1:		Line 1:
-	[[Image:2ynz.~~jpg~~\|left\|200px]]	+	[[Image:2ynz.png\|left\|200px]]

	{{STRUCTURE_2ynz\| PDB=2ynz \| SCENE= }}		{{STRUCTURE_2ynz\| PDB=2ynz \| SCENE= }}
Line 5:		Line 5:
	===Salmonella enterica SadA 823-947 fused to a GCN4 adaptor (SadAK5)===		===Salmonella enterica SadA 823-947 fused to a GCN4 adaptor (SadAK5)===

		+	{{ABSTRACT_PUBMED_23213248}}

	==About this Structure==		==About this Structure==

OCA at 21:20, 12 December 2012

2012-12-12T21:20:28Z

←Older revision		Revision as of 21:20, 12 December 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:2ynz.jpg\|left\|200px]]

-	~~The entry~~ 2ynz ~~is ON HOLD~~ ~~until Paper Publication~~	+	{{STRUCTURE_2ynz\| PDB=2ynz \| SCENE= }}

-	~~Authors: HARTMANN, M.D., HERNANDEZ ALVAREZ, B., LUPAS, A.N.~~	+	===Salmonella enterica SadA 823-947 fused to a GCN4 adaptor (SadAK5)===

-	~~Description~~: ~~Salmonella enterica SadA 823~~-~~947 fused to a GCN4 adaptor (SadAK5)~~	+
		+	==About this Structure==
		+	[[2ynz]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YNZ OCA].
		+	[[Category: Alvarez, B Hernandez.]]
		+	[[Category: Hartmann, M D.]]
		+	[[Category: Lupas, A N.]]
		+	[[Category: Dall domain]]
		+	[[Category: Dall2]]
		+	[[Category: Membrane protein]]
		+	[[Category: Taa]]
		+	[[Category: Trimeric autotransporter adhesin]]