2zwv - Revision history

OCA at 13:59, 1 November 2023

2023-11-01T13:59:47Z

←Older revision		Revision as of 13:59, 1 November 2023
Line 3:		Line 3:
	<StructureSection load='2zwv' size='340' side='right'caption='[[2zwv]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2zwv' size='340' side='right'caption='[[2zwv]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2zwv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Thet8 Thet8~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZWV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2zwv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZWV FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=SAH:S~~-~~ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~TTHA0533 ([https~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zwv OCA], [https://pdbe.org/2zwv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zwv RCSB], [https://www.ebi.ac.uk/pdbsum/2zwv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zwv ProSAT], [https://www.topsan.org/Proteins/RSGI/2zwv TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zwv OCA], [https://pdbe.org/2zwv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zwv RCSB], [https://www.ebi.ac.uk/pdbsum/2zwv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zwv ProSAT], [https://www.topsan.org/Proteins/RSGI/2zwv TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q5SKW0_THET8 Q5SKW0_THET8]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Thet8~~]]	+	[[Category: Thermus thermophilus HB8]]
-	[[Category: Kaminishi, T]]	+	[[Category: Kaminishi T]]
-	[[Category: Kawazoe, M]]	+	[[Category: Kawazoe M]]
-	[[Category: Naoe, C]]	+	[[Category: Naoe C]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Shirouzu M]]
-	[[Category: Shirouzu, M]]	+	[[Category: Takemoto C]]
-	[[Category: Takemoto, C]]	+	[[Category: Tatsuguchi A]]
-	[[Category: Tatsuguchi, A]]	+	[[Category: Terada T]]
-	[[Category: Terada, T]]	+	[[Category: Wang H]]
-	[[Category: Wang, H]]	+	[[Category: Yokoyama S]]
-	[[Category: Yokoyama, S]]	+
-	~~[[Category: 16s rrna methyltransferase]]~~	+
-	~~[[Category: Methyltransferase]]~~	+
-	~~[[Category: National project on protein structural and functional analyse]]~~	+
-	~~[[Category: Nppsfa]]~~	+
-	~~[[Category: Rsgi]]~~	+
-	~~[[Category: S-adenosyl-l-homocysteine]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 17:39, 15 December 2021

2021-12-15T17:39:49Z

←Older revision		Revision as of 17:39, 15 December 2021
Line 1:		Line 1:

	==Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533)==		==Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533)==
-	<StructureSection load='2zwv' size='340' side='right' caption='[[2zwv]], [[Resolution\|resolution]] 2.00Å' scene=''>	+	<StructureSection load='2zwv' size='340' side='right'caption='[[2zwv]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2zwv]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2ZWV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2zwv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZWV FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TTHA0533 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TTHA0533 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=2zwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zwv OCA], [~~http~~://pdbe.org/2zwv PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=2zwv RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/2zwv PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=2zwv ProSAT], [~~http~~://www.topsan.org/Proteins/RSGI/2zwv TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zwv OCA], [https://pdbe.org/2zwv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zwv RCSB], [https://www.ebi.ac.uk/pdbsum/2zwv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zwv ProSAT], [https://www.topsan.org/Proteins/RSGI/2zwv TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 20:		Line 20:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Thet8]]		[[Category: Thet8]]
	[[Category: Kaminishi, T]]		[[Category: Kaminishi, T]]

OCA at 07:30, 18 October 2018

2018-10-18T07:30:08Z

←Older revision		Revision as of 07:30, 18 October 2018
Line 1:		Line 1:
		+
	==Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533)==		==Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533)==
	<StructureSection load='2zwv' size='340' side='right' caption='[[2zwv]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2zwv' size='340' side='right' caption='[[2zwv]], [[Resolution\|resolution]] 2.00Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TTHA0533 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TTHA0533 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zwv OCA], [http://pdbe.org/2zwv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zwv RCSB], [http://www.ebi.ac.uk/pdbsum/2zwv PDBsum], [http://www.topsan.org/Proteins/RSGI/2zwv TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zwv OCA], [http://pdbe.org/2zwv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zwv RCSB], [http://www.ebi.ac.uk/pdbsum/2zwv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2zwv ProSAT], [http://www.topsan.org/Proteins/RSGI/2zwv TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 11:		Line 12:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zw/2zwv_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zw/2zwv_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 20:48, 8 February 2016

2016-02-08T20:48:13Z

←Older revision		Revision as of 20:48, 8 February 2016
Line 2:		Line 2:
	<StructureSection load='2zwv' size='340' side='right' caption='[[2zwv]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='2zwv' size='340' side='right' caption='[[2zwv]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[2zwv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Thermus_thermophilus Thermus thermophilus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZWV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[2zwv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZWV FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TTHA0533 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~274 Thermus thermophilus~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TTHA0533 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zwv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zwv RCSB], [http://www.ebi.ac.uk/pdbsum/2zwv PDBsum], [http://www.topsan.org/Proteins/RSGI/2zwv TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zwv OCA], [http://pdbe.org/2zwv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2zwv RCSB], [http://www.ebi.ac.uk/pdbsum/2zwv PDBsum], [http://www.topsan.org/Proteins/RSGI/2zwv TOPSAN]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 15:		Line 15:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zwv ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Thermus thermophilus~~]]	+	[[Category: Thet8]]
	[[Category: Kaminishi, T]]		[[Category: Kaminishi, T]]
	[[Category: Kawazoe, M]]		[[Category: Kawazoe, M]]

OCA at 10:49, 20 January 2015

2015-01-20T10:49:33Z

←Older revision		Revision as of 10:49, 20 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[2zwv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZWV FirstGlance]. <br>		<table><tr><td colspan='2'>[[2zwv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZWV FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TTHA0533 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TTHA0533 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zwv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zwv RCSB], [http://www.ebi.ac.uk/pdbsum/2zwv PDBsum], [http://www.topsan.org/Proteins/RSGI/2zwv TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zwv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zwv RCSB], [http://www.ebi.ac.uk/pdbsum/2zwv PDBsum], [http://www.topsan.org/Proteins/RSGI/2zwv TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
-	[[Category: Kaminishi, T.]]	+	[[Category: Kaminishi, T]]
-	[[Category: Kawazoe, M.]]	+	[[Category: Kawazoe, M]]
-	[[Category: Naoe, C.]]	+	[[Category: Naoe, C]]
-	[[Category: ~~RSGI, RIKEN~~ Structural ~~Genomics/Proteomics Initiative.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Shirouzu, M.]]	+	[[Category: Shirouzu, M]]
-	[[Category: Takemoto, C.]]	+	[[Category: Takemoto, C]]
-	[[Category: Tatsuguchi, A.]]	+	[[Category: Tatsuguchi, A]]
-	[[Category: Terada, T.]]	+	[[Category: Terada, T]]
-	[[Category: Wang, H.]]	+	[[Category: Wang, H]]
-	[[Category: Yokoyama, S.]]	+	[[Category: Yokoyama, S]]
	[[Category: 16s rrna methyltransferase]]		[[Category: 16s rrna methyltransferase]]
	[[Category: Methyltransferase]]		[[Category: Methyltransferase]]
	[[Category: National project on protein structural and functional analyse]]		[[Category: National project on protein structural and functional analyse]]
	[[Category: Nppsfa]]		[[Category: Nppsfa]]
-	[[Category: Riken structural genomics/proteomics initiative]]
	[[Category: Rsgi]]		[[Category: Rsgi]]
	[[Category: S-adenosyl-l-homocysteine]]		[[Category: S-adenosyl-l-homocysteine]]
-	[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 05:10, 2 October 2014

2014-10-02T05:10:20Z

←Older revision		Revision as of 05:10, 2 October 2014
Line 1:		Line 1:
-	~~[[Image:2zwv.png\|left\|200px]]~~	+	==Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533)==
-		+	<StructureSection load='2zwv' size='340' side='right' caption='[[2zwv]], [[Resolution\|resolution]] 2.00Å' scene=''>
-	~~{{STRUCTURE_2zwv\| PDB=2zwv \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[2zwv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ZWV FirstGlance]. <br>
-	===Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533)===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">TTHA0533 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zwv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2zwv RCSB], [http://www.ebi.ac.uk/pdbsum/2zwv PDBsum], [http://www.topsan.org/Proteins/RSGI/2zwv TOPSAN]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[2zwv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zw/2zwv_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
	[[Category: Kaminishi, T.]]		[[Category: Kaminishi, T.]]

OCA: Protected "2zwv" [edit=sysop:move=sysop]

2013-01-07T22:33:06Z

Protected "2zwv" [edit=sysop:move=sysop]

←Older revision

Revision as of 22:33, 7 January 2013

OCA at 22:33, 7 January 2013

2013-01-07T22:33:01Z

←Older revision		Revision as of 22:33, 7 January 2013
Line 1:		Line 1:
-	~~{{Seed}}~~	+	[[Image:2zwv.png\|left\|200px]]
-	[[Image:2zwv.~~jpg~~\|left\|200px]]	+

-	<!--
-	The line below this paragraph, containing "STRUCTURE_2zwv", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_2zwv\| PDB=2zwv \| SCENE= }}		{{STRUCTURE_2zwv\| PDB=2zwv \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~2ZWV~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA].	+	[[2zwv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA].
	[[Category: Thermus thermophilus]]		[[Category: Thermus thermophilus]]
	[[Category: Kaminishi, T.]]		[[Category: Kaminishi, T.]]
Line 35:		Line 28:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 23 10:05:09 2009''

OCA at 08:05, 23 December 2009

2009-12-23T08:05:10Z

←Older revision		Revision as of 08:05, 23 December 2009
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:2zwv.jpg\|left\|200px]]

-	The ~~entry 2zwv~~ is ~~ON HOLD~~ ~~until Dec 18 2010~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_2zwv", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_2zwv\| PDB=2zwv \| SCENE= }}

-	~~Authors: Wang, H., Kawazoe, M., Kaminishi, T., Tatsuguchi, A., Naoe, C., Terada, T., Shirouzu, M., Takemoto, C., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative~~ (~~RSGI~~)	+	===Crystal structure of Thermus thermophilus 16S rRNA methyltransferase RsmC (TTHA0533)===

-	Description:

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Thu Sep 3 15~~:15:11 2009''	+	==About this Structure==
		+	2ZWV is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZWV OCA].
		+	[[Category: Thermus thermophilus]]
		+	[[Category: Kaminishi, T.]]
		+	[[Category: Kawazoe, M.]]
		+	[[Category: Naoe, C.]]
		+	[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
		+	[[Category: Shirouzu, M.]]
		+	[[Category: Takemoto, C.]]
		+	[[Category: Tatsuguchi, A.]]
		+	[[Category: Terada, T.]]
		+	[[Category: Wang, H.]]
		+	[[Category: Yokoyama, S.]]
		+	[[Category: 16s rrna methyltransferase]]
		+	[[Category: Methyltransferase]]
		+	[[Category: National project on protein structural and functional analyse]]
		+	[[Category: Nppsfa]]
		+	[[Category: Riken structural genomics/proteomics initiative]]
		+	[[Category: Rsgi]]
		+	[[Category: S-adenosyl-l-homocysteine]]
		+	[[Category: Structural genomic]]
		+	[[Category: Transferase]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 23 10:05:09 2009''

OCA at 12:15, 3 September 2009

2009-09-03T12:15:12Z

←Older revision		Revision as of 12:15, 3 September 2009
Line 3:		Line 3:
	The entry 2zwv is ON HOLD until Dec 18 2010		The entry 2zwv is ON HOLD until Dec 18 2010

-	Authors: Wang, H., Kawazoe, M., Kaminishi, T., Tatsuguchi, A., Naoe, C., Terada, T., Shirouzu, M., Takemoto, C., Yokoyama, S.	+	Authors: Wang, H., Kawazoe, M., Kaminishi, T., Tatsuguchi, A., Naoe, C., Terada, T., Shirouzu, M., Takemoto, C., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

	Description:		Description:

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Jan~~ ~~7 09~~:31:00 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Sep 3 15:15:11 2009''