3axe - Revision history

OCA at 08:48, 11 October 2023

2023-10-11T08:48:55Z

←Older revision		Revision as of 08:48, 11 October 2023
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	<StructureSection load='3axe' size='340' side='right'caption='[[3axe]], [[Resolution\|resolution]] 1.53Å' scene=''>		<StructureSection load='3axe' size='340' side='right'caption='[[3axe]], [[Resolution\|resolution]] 1.53Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3axe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Fibss Fibss~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AXE FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3axe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Fibrobacter_succinogenes_subsp._succinogenes_S85 Fibrobacter succinogenes subsp. succinogenes S85]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AXE FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=BGC:BETA~~-~~D-GLUCOSE'>BGC</scene>~~, ~~<scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-~~1~~,3-DIOL'>TRS</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.53Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max~~-~~height: 3em;~~'>~~[[3axd\|3axd]]~~</~~div~~><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PRD_900005:beta-cellobiose'>PRD_900005</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">Fisuc_2961~~, ~~FSU_0226 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=59374 FIBSS])~~<~~/td></tr>~~	+
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks'>[https~~:~~//en.wikipedia.org/wiki/Licheninase Licheninase], with EC number [https://www.brenda~~-~~enzymes.info/php/result_flat.php4?ecno=3.~~2.1~~.73~~ 3~~.2.1.73]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3axe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3axe OCA], [https://pdbe.org/3axe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3axe RCSB], [https://www.ebi.ac.uk/pdbsum/3axe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3axe ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3axe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3axe OCA], [https://pdbe.org/3axe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3axe RCSB], [https://www.ebi.ac.uk/pdbsum/3axe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3axe ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/GUB_FIBSS GUB_FIBSS]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Fibss~~]]	+	[[Category: Fibrobacter succinogenes subsp. succinogenes S85]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Licheninase]]~~	+	[[Category: Chen CC]]
-	[[Category: Chen~~, C C~~]]	+	[[Category: Cheng YS]]
-	[[Category: Cheng~~, Y S~~]]	+	[[Category: Guo RT]]
-	[[Category: Guo~~, R T~~]]	+	[[Category: Huang CH]]
-	[[Category: Huang~~, C H~~]]	+	[[Category: Huang JW]]
-	[[Category: Huang~~, J W~~]]	+	[[Category: Ko TP]]
-	[[Category: Ko~~, T P~~]]	+	[[Category: Lai HL]]
-	[[Category: Lai~~, H L~~]]	+	[[Category: Lin CY]]
-	[[Category: Lin~~, C Y~~]]	+	[[Category: Liu JR]]
-	[[Category: Liu~~, J R~~]]	+	[[Category: Ma Y]]
-	[[Category: Ma, Y]]	+	[[Category: Zheng Y]]
-	[[Category: Zheng, Y]]	+
-	~~[[Category: Cellobiose/cellotetraose]]~~	+
-	~~[[Category: Glucanase]]~~	+
-	~~[[Category: Hydrolase~~]]	+

OCA at 11:16, 5 January 2022

2022-01-05T11:16:15Z

←Older revision		Revision as of 11:16, 5 January 2022
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	==The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)==		==The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)==
-	<StructureSection load='3axe' size='340' side='right' caption='[[3axe]], [[Resolution\|resolution]] 1.53Å' scene=''>	+	<StructureSection load='3axe' size='340' side='right'caption='[[3axe]], [[Resolution\|resolution]] 1.53Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3axe]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Fibss Fibss]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3AXE FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3axe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Fibss Fibss]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AXE FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:~~CALCIUM+ION~~'>CA</scene>, <scene name='pdbligand=~~CBI~~:~~CELLOBIOSE~~'>~~CBI~~</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3axd\|3axd]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3axd\|3axd]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Fisuc_2961, FSU_0226 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=59374 FIBSS])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Fisuc_2961, FSU_0226 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=59374 FIBSS])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Licheninase Licheninase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.73 3.2.1.73] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Licheninase Licheninase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.73 3.2.1.73] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3axe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3axe OCA], [~~http~~://pdbe.org/3axe PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3axe RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3axe PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3axe ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3axe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3axe OCA], [https://pdbe.org/3axe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3axe RCSB], [https://www.ebi.ac.uk/pdbsum/3axe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3axe ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 21:		Line 21:

	==See Also==		==See Also==
-	*[[Glucanase\|Glucanase]]	+	*[[Glucanase 3D structures\|Glucanase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 27:		Line 27:
	</StructureSection>		</StructureSection>
	[[Category: Fibss]]		[[Category: Fibss]]
		+	[[Category: Large Structures]]
	[[Category: Licheninase]]		[[Category: Licheninase]]
	[[Category: Chen, C C]]		[[Category: Chen, C C]]

OCA at 19:56, 11 August 2016

2016-08-11T19:56:04Z

←Older revision		Revision as of 19:56, 11 August 2016
Line 1:		Line 1:
		+
	==The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)==		==The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)==
	<StructureSection load='3axe' size='340' side='right' caption='[[3axe]], [[Resolution\|resolution]] 1.53Å' scene=''>		<StructureSection load='3axe' size='340' side='right' caption='[[3axe]], [[Resolution\|resolution]] 1.53Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3axe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Fibrobacter_succinogenes_subsp._succinogenes_s85 Fibrobacter succinogenes subsp. succinogenes s85~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AXE FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3axe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Fibss Fibss]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AXE FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CBI:CELLOBIOSE'>CBI</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CBI:CELLOBIOSE'>CBI</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3axd\|3axd]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3axd\|3axd]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Fisuc_2961, FSU_0226 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=59374 ~~Fibrobacter succinogenes subsp. succinogenes S85~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Fisuc_2961, FSU_0226 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=59374 FIBSS])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Licheninase Licheninase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.73 3.2.1.73] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Licheninase Licheninase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.73 3.2.1.73] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3axe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3axe OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3axe RCSB], [http://www.ebi.ac.uk/pdbsum/3axe PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3axe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3axe OCA], [http://pdbe.org/3axe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3axe RCSB], [http://www.ebi.ac.uk/pdbsum/3axe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3axe ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 17:		Line 18:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3axe" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 24:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Fibrobacter succinogenes subsp. succinogenes s85~~]]	+	[[Category: Fibss]]
	[[Category: Licheninase]]		[[Category: Licheninase]]
	[[Category: Chen, C C]]		[[Category: Chen, C C]]

OCA at 10:23, 20 January 2015

2015-01-20T10:23:29Z

←Older revision		Revision as of 10:23, 20 January 2015
Line 1:		Line 1:
-	~~{{STRUCTURE_3axe\| PDB=3axe \| SCENE= }}~~	+	==The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)==
-	===The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)===	+	<StructureSection load='3axe' size='340' side='right' caption='[[3axe]], [[Resolution\|resolution]] 1.53Å' scene=''>
-	~~{{ABSTRACT_PUBMED_21959377}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3axe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Fibrobacter_succinogenes_subsp._succinogenes_s85 Fibrobacter succinogenes subsp. succinogenes s85]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3AXE FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CBI:CELLOBIOSE'>CBI</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3axd\|3axd]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Fisuc_2961, FSU_0226 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=59374 Fibrobacter succinogenes subsp. succinogenes S85])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Licheninase Licheninase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.73 3.2.1.73] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3axe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3axe OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3axe RCSB], [http://www.ebi.ac.uk/pdbsum/3axe PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	1,3-1,4-beta-D: -Glucanase has been widely used as a feed additive to help non-ruminant animals digest plant fibers, with potential in increasing nutrition turnover rate and reducing sanitary problems. Engineering of enzymes for better thermostability is of great importance because it not only can broaden their industrial applications, but also facilitate exploring the mechanism of enzyme stability from structural point of view. To obtain enzyme with higher thermostability and specific activity, structure-based rational design was carried out in this study. Eleven mutants of Fibrobacter succinogenes 1,3-1,4-beta-D: -glucanase were constructed in attempt to improve the enzyme properties. In particular, the crude proteins expressed in Pichia pastoris were examined firstly to ensure that the protein productions meet the need for industrial fermentation. The crude protein of V18Y mutant showed a 2 degrees C increment of Tm and W203Y showed approximately 30% increment of the specific activity. To further investigate the structure-function relationship, some mutants were expressed and purified from P. pastoris and Escherichia coli. Notably, the specific activity of purified W203Y which was expressed in E. coli was 63% higher than the wild-type protein. The double mutant V18Y/W203Y showed the same increments of Tm and specific activity as the single mutants did. When expressed and purified from E. coli, V18Y/W203Y showed similar pattern of thermostability increment and 75% higher specific activity. Furthermore, the apo-form and substrate complex structures of V18Y/W203Y were solved by X-ray crystallography. Analyzing protein structure of V18Y/W203Y helps elucidate how the mutations could enhance the protein stability and enzyme activity.

-	~~==About this Structure==~~	+	Rational design to improve thermostability and specific activity of the truncated Fibrobacter succinogenes 1,3-1,4-beta-D: -glucanase.,Huang JW, Cheng YS, Ko TP, Lin CY, Lai HL, Chen CC, Ma Y, Zheng Y, Huang CH, Zou P, Liu JR, Guo RT Appl Microbiol Biotechnol. 2011 Sep 30. PMID:21959377<ref>PMID:21959377</ref>
-	~~[[3axe]] is a~~ 1 ~~chain structure with sequence from [http~~:~~//en~~.~~wikipedia~~.~~org/wiki/Fibrobacter_succinogenes_subsp~~.~~_succinogenes_s85 Fibrobacter succinogenes subsp. succinogenes s85]. Full crystallographic information is available from [http~~:/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group~~=~~"xtra">PMID:021959377</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+
		+	==See Also==
		+	*[[Glucanase\|Glucanase]]
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Fibrobacter succinogenes subsp. succinogenes s85]]		[[Category: Fibrobacter succinogenes subsp. succinogenes s85]]
	[[Category: Licheninase]]		[[Category: Licheninase]]
-	[[Category: Chen, C C.]]	+	[[Category: Chen, C C]]
-	[[Category: Cheng, Y S.]]	+	[[Category: Cheng, Y S]]
-	[[Category: Guo, R T.]]	+	[[Category: Guo, R T]]
-	[[Category: Huang, C H.]]	+	[[Category: Huang, C H]]
-	[[Category: Huang, J W.]]	+	[[Category: Huang, J W]]
-	[[Category: Ko, T P.]]	+	[[Category: Ko, T P]]
-	[[Category: Lai, H L.]]	+	[[Category: Lai, H L]]
-	[[Category: Lin, C Y.]]	+	[[Category: Lin, C Y]]
-	[[Category: Liu, J R.]]	+	[[Category: Liu, J R]]
-	[[Category: Ma, Y.]]	+	[[Category: Ma, Y]]
-	[[Category: Zheng, Y.]]	+	[[Category: Zheng, Y]]
	[[Category: Cellobiose/cellotetraose]]		[[Category: Cellobiose/cellotetraose]]
	[[Category: Glucanase]]		[[Category: Glucanase]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]

OCA at 07:32, 20 June 2013

2013-06-20T07:32:02Z

←Older revision		Revision as of 07:32, 20 June 2013
Line 1:		Line 1:
-	[[Image:3axe.png\|left\|200px]]
-
	{{STRUCTURE_3axe\| PDB=3axe \| SCENE= }}		{{STRUCTURE_3axe\| PDB=3axe \| SCENE= }}
-
	===The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)===		===The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)===
-
	{{ABSTRACT_PUBMED_21959377}}		{{ABSTRACT_PUBMED_21959377}}

	==About this Structure==		==About this Structure==
-	[[3axe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Fibrobacter_succinogenes~~ Fibrobacter succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA].	+	[[3axe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Fibrobacter_succinogenes_subsp._succinogenes_s85 Fibrobacter succinogenes subsp. succinogenes s85]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA].
-		+
-	~~==See Also==~~	+
-	*[[Glucanase\|Glucanase]]	+

	==Reference==		==Reference==
-	<ref group="xtra">PMID:021959377</ref><references group="xtra"/>	+	<ref group="xtra">PMID:021959377</ref><references group="xtra"/><references/>
-	[[Category: Fibrobacter succinogenes]]	+	[[Category: Fibrobacter succinogenes subsp. succinogenes s85]]
	[[Category: Licheninase]]		[[Category: Licheninase]]
	[[Category: Chen, C C.]]		[[Category: Chen, C C.]]

OCA at 13:26, 20 October 2012

2012-10-20T13:26:10Z

←Older revision		Revision as of 13:26, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[3axe]] is a 1 chain structure ~~of [[Glucanase]]~~ with sequence from [http://en.wikipedia.org/wiki/Fibrobacter_succinogenes Fibrobacter succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA].	+	[[3axe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Fibrobacter_succinogenes Fibrobacter succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA].

	==See Also==		==See Also==

OCA at 11:56, 26 July 2012

2012-07-26T11:56:44Z

←Older revision		Revision as of 11:56, 26 July 2012
Line 1:		Line 1:
-	[[Image:3axe.~~jpg~~\|left\|200px]]	+	[[Image:3axe.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3axe", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3axe\| PDB=3axe \| SCENE= }}		{{STRUCTURE_3axe\| PDB=3axe \| SCENE= }}

	===The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)===		===The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_21959377}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 21959377 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_21959377}}		{{ABSTRACT_PUBMED_21959377}}

	==About this Structure==		==About this Structure==
-	[[3axe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Fibrobacter_succinogenes Fibrobacter succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA].	+	[[3axe]] is a 1 chain structure of [[Glucanase]] with sequence from [http://en.wikipedia.org/wiki/Fibrobacter_succinogenes Fibrobacter succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA].
		+
		+	==See Also==
		+	*[[Glucanase\|Glucanase]]

	==Reference==		==Reference==

OCA at 06:42, 15 February 2012

2012-02-15T06:42:57Z

←Older revision		Revision as of 06:42, 15 February 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3axe.jpg\|left\|200px]]

-	The ~~entry 3axe~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3axe", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3axe\| PDB=3axe \| SCENE= }}

-	~~Authors: Huang~~, ~~J.W.~~, ~~Cheng, Y.S., Ko, T.P., Lin, C.Y., Lai, H.L., Chen, C.C., Ma, Y., Huang, C.H., Zheng, Y., Liu, J.R., Guo, R.T.~~	+	===The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)===

-	~~Description:~~ The ~~truncated Fibrobacter succinogenes 1~~,~~3-1~~,4-~~beta~~-D-~~glucanase V18Y~~/~~W203Y in complex with~~ cellotetraose ~~(cellobiose density was observed)~~	+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_21959377}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 21959377 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_21959377}}
		+
		+	==About this Structure==
		+	[[3axe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Fibrobacter_succinogenes Fibrobacter succinogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXE OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:021959377</ref><references group="xtra"/>
		+	[[Category: Fibrobacter succinogenes]]
		+	[[Category: Licheninase]]
		+	[[Category: Chen, C C.]]
		+	[[Category: Cheng, Y S.]]
		+	[[Category: Guo, R T.]]
		+	[[Category: Huang, C H.]]
		+	[[Category: Huang, J W.]]
		+	[[Category: Ko, T P.]]
		+	[[Category: Lai, H L.]]
		+	[[Category: Lin, C Y.]]
		+	[[Category: Liu, J R.]]
		+	[[Category: Ma, Y.]]
		+	[[Category: Zheng, Y.]]
		+	[[Category: Cellobiose/cellotetraose]]
		+	[[Category: Glucanase]]
		+	[[Category: Hydrolase]]

OCA at 06:46, 27 April 2011

2011-04-27T06:46:38Z

←Older revision		Revision as of 06:46, 27 April 2011
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3axe is ON HOLD	+	The entry 3axe is ON HOLD until Paper Publication

	Authors: Huang, J.W., Cheng, Y.S., Ko, T.P., Lin, C.Y., Lai, H.L., Chen, C.C., Ma, Y., Huang, C.H., Zheng, Y., Liu, J.R., Guo, R.T.		Authors: Huang, J.W., Cheng, Y.S., Ko, T.P., Lin, C.Y., Lai, H.L., Chen, C.C., Ma, Y., Huang, C.H., Zheng, Y., Liu, J.R., Guo, R.T.

	Description: The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)		Description: The truncated Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase V18Y/W203Y in complex with cellotetraose (cellobiose density was observed)

OCA: Protected "3axe" [edit=sysop:move=sysop]

2011-04-13T04:49:27Z

Protected "3axe" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:49, 13 April 2011