3do8 - Revision history

OCA at 09:42, 21 February 2024

2024-02-21T09:42:18Z

←Older revision		Revision as of 09:42, 21 February 2024
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	<StructureSection load='3do8' size='340' side='right'caption='[[3do8]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='3do8' size='340' side='right'caption='[[3do8]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3do8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Arcfl Arcfl~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DO8 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3do8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DO8 FirstGlance]. <br>
-	</td></tr><tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>coaD, AF_2206 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id~~=2234 ARCFL])</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.6Å</td></tr>
-	~~<tr id='activity'><td class~~="~~sblockLbl~~">~~<b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Pantetheine~~-~~phosphate_adenylyltransferase Pantetheine-phosphate adenylyltransferase]~~, ~~with EC number~~ [~~https://www~~.~~brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.3 2.7.7.3] </span>~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3do8 OCA], [https://pdbe.org/3do8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3do8 RCSB], [https://www.ebi.ac.uk/pdbsum/3do8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3do8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3do8 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3do8 OCA], [https://pdbe.org/3do8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3do8 RCSB], [https://www.ebi.ac.uk/pdbsum/3do8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3do8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3do8 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/COAD_ARCFU COAD_ARCFU]] Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.	+	[https://www.uniprot.org/uniprot/COAD_ARCFU COAD_ARCFU] Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 22:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Arcfl]]
-	[[Category: Large Structures]]
-	[[Category: Pantetheine-phosphate adenylyltransferase]]
-	[[Category: Jedrzejczak, R]]
-	[[Category: Joachimiak, A]]
-	[[Category: Structural genomic]]
-	[[Category: Wu, R]]
-	[[Category: Zhang, R]]
	[[Category: Archaeoglobus fulgidus]]		[[Category: Archaeoglobus fulgidus]]
-	[[Category: ~~Coenzyme a biosynthesis~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Cytoplasm~~]]	+	[[Category: Jedrzejczak R]]
-	[[Category: ~~Mcsg~~]]	+	[[Category: Joachimiak A]]
-	[[Category: ~~Nucleotidyltransferase~~]]	+	[[Category: Wu R]]
-	[[Category: ~~PSI, Protein structure initiative]]~~	+	[[Category: Zhang R]]
-	~~[[Category: Protein with unknown function]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 08:03, 9 February 2022

2022-02-09T08:03:52Z

←Older revision		Revision as of 08:03, 9 February 2022
Line 1:		Line 1:

	==The crystal structure of the protein with unknown function from Archaeoglobus fulgidus==		==The crystal structure of the protein with unknown function from Archaeoglobus fulgidus==
-	<StructureSection load='3do8' size='340' side='right' caption='[[3do8]], [[Resolution\|resolution]] 1.60Å' scene=''>	+	<StructureSection load='3do8' size='340' side='right'caption='[[3do8]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3do8]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Arcfl Arcfl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3DO8 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3do8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arcfl Arcfl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DO8 FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">coaD, AF_2206 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 ARCFL])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">coaD, AF_2206 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 ARCFL])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Pantetheine-phosphate_adenylyltransferase Pantetheine-phosphate adenylyltransferase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.3 2.7.7.3] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Pantetheine-phosphate_adenylyltransferase Pantetheine-phosphate adenylyltransferase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.3 2.7.7.3] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3do8 OCA], [~~http~~://pdbe.org/3do8 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3do8 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3do8 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3do8 ProSAT], [~~http~~://www.topsan.org/Proteins/MCSG/3do8 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3do8 OCA], [https://pdbe.org/3do8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3do8 RCSB], [https://www.ebi.ac.uk/pdbsum/3do8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3do8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3do8 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/COAD_ARCFU COAD_ARCFU]] Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.	+	[[https://www.uniprot.org/uniprot/COAD_ARCFU COAD_ARCFU]] Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/do/3do8_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/do/3do8_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Arcfl]]		[[Category: Arcfl]]
		+	[[Category: Large Structures]]
	[[Category: Pantetheine-phosphate adenylyltransferase]]		[[Category: Pantetheine-phosphate adenylyltransferase]]
	[[Category: Jedrzejczak, R]]		[[Category: Jedrzejczak, R]]

OCA at 08:54, 25 October 2017

2017-10-25T08:54:07Z

←Older revision		Revision as of 08:54, 25 October 2017
Line 1:		Line 1:
		+
	==The crystal structure of the protein with unknown function from Archaeoglobus fulgidus==		==The crystal structure of the protein with unknown function from Archaeoglobus fulgidus==
	<StructureSection load='3do8' size='340' side='right' caption='[[3do8]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='3do8' size='340' side='right' caption='[[3do8]], [[Resolution\|resolution]] 1.60Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">coaD, AF_2206 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 ARCFL])</td></tr>		</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">coaD, AF_2206 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 ARCFL])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pantetheine-phosphate_adenylyltransferase Pantetheine-phosphate adenylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.3 2.7.7.3] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pantetheine-phosphate_adenylyltransferase Pantetheine-phosphate adenylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.3 2.7.7.3] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3do8 OCA], [http://pdbe.org/3do8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3do8 RCSB], [http://www.ebi.ac.uk/pdbsum/3do8 PDBsum], [http://www.topsan.org/Proteins/MCSG/3do8 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3do8 OCA], [http://pdbe.org/3do8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3do8 RCSB], [http://www.ebi.ac.uk/pdbsum/3do8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3do8 ProSAT], [http://www.topsan.org/Proteins/MCSG/3do8 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 30:		Line 31:
	[[Category: Archaeoglobus fulgidus]]		[[Category: Archaeoglobus fulgidus]]
	[[Category: Coenzyme a biosynthesis]]		[[Category: Coenzyme a biosynthesis]]
		+	[[Category: Cytoplasm]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
	[[Category: Nucleotidyltransferase]]		[[Category: Nucleotidyltransferase]]

OCA at 09:35, 8 February 2016

2016-02-08T09:35:02Z

←Older revision		Revision as of 09:35, 8 February 2016
Line 2:		Line 2:
	<StructureSection load='3do8' size='340' side='right' caption='[[3do8]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='3do8' size='340' side='right' caption='[[3do8]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3do8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Archaeoglobus_fulgidus Archaeoglobus fulgidus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DO8 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3do8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arcfl Arcfl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DO8 FirstGlance]. <br>
-	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">coaD, AF_2206 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 ~~Archaeoglobus fulgidus~~])</td></tr>	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">coaD, AF_2206 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 ARCFL])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pantetheine-phosphate_adenylyltransferase Pantetheine-phosphate adenylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.3 2.7.7.3] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pantetheine-phosphate_adenylyltransferase Pantetheine-phosphate adenylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.3 2.7.7.3] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3do8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3do8 RCSB], [http://www.ebi.ac.uk/pdbsum/3do8 PDBsum], [http://www.topsan.org/Proteins/MCSG/3do8 TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3do8 OCA], [http://pdbe.org/3do8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3do8 RCSB], [http://www.ebi.ac.uk/pdbsum/3do8 PDBsum], [http://www.topsan.org/Proteins/MCSG/3do8 TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3do8 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Archaeoglobus fulgidus~~]]	+	[[Category: Arcfl]]
	[[Category: Pantetheine-phosphate adenylyltransferase]]		[[Category: Pantetheine-phosphate adenylyltransferase]]
	[[Category: Jedrzejczak, R]]		[[Category: Jedrzejczak, R]]
Line 28:		Line 28:
	[[Category: Wu, R]]		[[Category: Wu, R]]
	[[Category: Zhang, R]]		[[Category: Zhang, R]]
		+	[[Category: Archaeoglobus fulgidus]]
	[[Category: Coenzyme a biosynthesis]]		[[Category: Coenzyme a biosynthesis]]
	[[Category: Mcsg]]		[[Category: Mcsg]]

OCA at 22:21, 24 December 2014

2014-12-24T22:21:16Z

←Older revision		Revision as of 22:21, 24 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3do8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3do8 RCSB], [http://www.ebi.ac.uk/pdbsum/3do8 PDBsum], [http://www.topsan.org/Proteins/MCSG/3do8 TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3do8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3do8 RCSB], [http://www.ebi.ac.uk/pdbsum/3do8 PDBsum], [http://www.topsan.org/Proteins/MCSG/3do8 TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/COAD_ARCFU COAD_ARCFU]] Reversibly transfers an adenylyl group from ATP to 4'-phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 08:21, 12 November 2014

2014-11-12T08:21:26Z

←Older revision		Revision as of 08:21, 12 November 2014
Line 1:		Line 1:
-	~~[[Image:3do8.png\|left\|200px]]~~	+	==The crystal structure of the protein with unknown function from Archaeoglobus fulgidus==
-		+	<StructureSection load='3do8' size='340' side='right' caption='[[3do8]], [[Resolution\|resolution]] 1.60Å' scene=''>
-	~~{{STRUCTURE_3do8\| PDB=3do8 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3do8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DO8 FirstGlance]. <br>
-	===The crystal structure of the protein with unknown function from Archaeoglobus fulgidus===	+	</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">coaD, AF_2206 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 Archaeoglobus fulgidus])</td></tr>
-		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pantetheine-phosphate_adenylyltransferase Pantetheine-phosphate adenylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.3 2.7.7.3] </span></td></tr>
-		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3do8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3do8 RCSB], [http://www.ebi.ac.uk/pdbsum/3do8 PDBsum], [http://www.topsan.org/Proteins/MCSG/3do8 TOPSAN]</span></td></tr>
-	==~~About this Structure~~==	+	</table>
-	[[3do8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/do/3do8_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Archaeoglobus fulgidus]]		[[Category: Archaeoglobus fulgidus]]
	[[Category: Pantetheine-phosphate adenylyltransferase]]		[[Category: Pantetheine-phosphate adenylyltransferase]]
-	[[Category: Jedrzejczak, R.]]	+	[[Category: Jedrzejczak, R]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Wu, R.]]	+	[[Category: Wu, R]]
-	[[Category: Zhang, R~~.]]~~	+	[[Category: Zhang, R]]
-	~~[[Category: Archaeoglobus fulgidus~~]]	+
	[[Category: Coenzyme a biosynthesis]]		[[Category: Coenzyme a biosynthesis]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
-	[[Category: Midwest center for structural genomic]]
	[[Category: Nucleotidyltransferase]]		[[Category: Nucleotidyltransferase]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
	[[Category: Protein with unknown function]]		[[Category: Protein with unknown function]]
-	[[Category: Psi-2]]
-	[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA: Protected "3do8" [edit=sysop:move=sysop]

2013-01-07T18:04:14Z

Protected "3do8" [edit=sysop:move=sysop]

←Older revision

Revision as of 18:04, 7 January 2013

OCA at 18:04, 7 January 2013

2013-01-07T18:04:10Z

←Older revision		Revision as of 18:04, 7 January 2013
Line 1:		Line 1:
-	{{Seed}}
	[[Image:3do8.png\|left\|200px]]		[[Image:3do8.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3do8", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3do8\| PDB=3do8 \| SCENE= }}		{{STRUCTURE_3do8\| PDB=3do8 \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~3DO8~~ is a 2 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA].	+	[[3do8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA].
	[[Category: Archaeoglobus fulgidus]]		[[Category: Archaeoglobus fulgidus]]
	[[Category: Pantetheine-phosphate adenylyltransferase]]		[[Category: Pantetheine-phosphate adenylyltransferase]]
Line 24:		Line 17:
	[[Category: Archaeoglobus fulgidus]]		[[Category: Archaeoglobus fulgidus]]
	[[Category: Coenzyme a biosynthesis]]		[[Category: Coenzyme a biosynthesis]]
-	[[Category: Cytoplasm]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
	[[Category: Midwest center for structural genomic]]		[[Category: Midwest center for structural genomic]]
Line 33:		Line 25:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 10:05:48 2008''

OCA at 08:05, 16 November 2008

2008-11-16T08:05:50Z

←Older revision		Revision as of 08:05, 16 November 2008
Line 14:		Line 14:

	==About this Structure==		==About this Structure==
-	3DO8 is a ~~[[Single protein]]~~ structure of ~~sequence~~ from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA].	+	3DO8 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA].
	[[Category: Archaeoglobus fulgidus]]		[[Category: Archaeoglobus fulgidus]]
	[[Category: Pantetheine-phosphate adenylyltransferase]]		[[Category: Pantetheine-phosphate adenylyltransferase]]
-	[[Category: Single protein]]
	[[Category: Jedrzejczak, R.]]		[[Category: Jedrzejczak, R.]]
	[[Category: Joachimiak, A.]]		[[Category: Joachimiak, A.]]
Line 35:		Line 34:
	[[Category: Transferase]]		[[Category: Transferase]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun ~~Sep 28 15~~:38:50 2008''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 10:05:48 2008''

OCA at 12:38, 28 September 2008

2008-09-28T12:38:51Z

←Older revision		Revision as of 12:38, 28 September 2008
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3do8.png\|left\|200px]]

-	The ~~entry 3do8~~ is ~~ON HOLD~~ ~~until Aug 28 2009~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3do8", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3do8\| PDB=3do8 \| SCENE= }}

-	~~Authors: Zhang, R., Wu, R., Jedrzejczak, R., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)~~	+	===The crystal structure of the protein with unknown function from Archaeoglobus fulgidus===

-	Description: The crystal structure of the protein with unknown function from Archaeoglobus fulgidus (CASP Target)

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Jul 23 12:~~15:47 2008''	+	==About this Structure==
		+	3DO8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DO8 OCA].
		+	[[Category: Archaeoglobus fulgidus]]
		+	[[Category: Pantetheine-phosphate adenylyltransferase]]
		+	[[Category: Single protein]]
		+	[[Category: Jedrzejczak, R.]]
		+	[[Category: Joachimiak, A.]]
		+	[[Category: MCSG, Midwest Center for Structural Genomics.]]
		+	[[Category: Wu, R.]]
		+	[[Category: Zhang, R.]]
		+	[[Category: Archaeoglobus fulgidus]]
		+	[[Category: Coenzyme a biosynthesis]]
		+	[[Category: Cytoplasm]]
		+	[[Category: Mcsg]]
		+	[[Category: Midwest center for structural genomic]]
		+	[[Category: Nucleotidyltransferase]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Protein with unknown function]]
		+	[[Category: Psi-2]]
		+	[[Category: Structural genomic]]
		+	[[Category: Transferase]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 15:38:50 2008''