3ez7 - Revision history

OCA at 00:26, 28 December 2023

2023-12-28T00:26:53Z

←Older revision		Revision as of 00:26, 28 December 2023
Line 3:		Line 3:
	<StructureSection load='3ez7' size='340' side='right'caption='[[3ez7]], [[Resolution\|resolution]] 2.92Å' scene=''>		<StructureSection load='3ez7' size='340' side='right'caption='[[3ez7]], [[Resolution\|resolution]] 2.92Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ez7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~"bacillus_coli"_migula_1895 "bacillus~~ coli~~" migula 1895~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EZ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EZ7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ez7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EZ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EZ7 FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[3ez2\|3ez2]], [[3ez6\|3ez6]], [[3ez9\|3ez9]], [[3ezf\|3ezf]]</div></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.92Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">p1, parA ([https://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=562 "Bacillus coli" Migula 1895])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ez7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ez7 OCA], [https://pdbe.org/3ez7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ez7 RCSB], [https://www.ebi.ac.uk/pdbsum/3ez7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ez7 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ez7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ez7 OCA], [https://pdbe.org/3ez7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ez7 RCSB], [https://www.ebi.ac.uk/pdbsum/3ez7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ez7 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/PARA_ECOLX PARA_ECOLX]] This protein is essential for plasmid partition. It ensures the proper distribution of newly replicated plasmids to daughter cells during cell division. ParA is trans-acting.	+	[https://www.uniprot.org/uniprot/PARA_ECOLX PARA_ECOLX] This protein is essential for plasmid partition. It ensures the proper distribution of newly replicated plasmids to daughter cells during cell division. ParA is trans-acting.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus~~ coli ~~migula 1895~~]]	+	[[Category: Escherichia coli]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Schumacher~~, M A]]~~	+	[[Category: Schumacher MA]]
-	~~[[Category: Dna binding]]~~	+
-	~~[[Category: Dna binding protein]]~~	+
-	~~[[Category: Partition]]~~	+
-	~~[[Category: Plasmid]]~~	+
-	~~[[Category: Plasmid partition]]~~	+
-	~~[[Category: Winged-hth~~]]	+

OCA at 19:48, 20 October 2021

2021-10-20T19:48:25Z

←Older revision		Revision as of 19:48, 20 October 2021
Line 1:		Line 1:

	==Partition Protein Apo form in space group I4122==		==Partition Protein Apo form in space group I4122==
-	<StructureSection load='3ez7' size='340' side='right' caption='[[3ez7]], [[Resolution\|resolution]] 2.92Å' scene=''>	+	<StructureSection load='3ez7' size='340' side='right'caption='[[3ez7]], [[Resolution\|resolution]] 2.92Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ez7]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EZ7 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3EZ7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ez7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EZ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EZ7 FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ez2\|3ez2]], [[3ez6\|3ez6]], [[3ez9\|3ez9]], [[3ezf\|3ezf]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3ez2\|3ez2]], [[3ez6\|3ez6]], [[3ez9\|3ez9]], [[3ezf\|3ezf]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">p1, parA ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">p1, parA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ez7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ez7 OCA], [~~http~~://pdbe.org/3ez7 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3ez7 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3ez7 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3ez7 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ez7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ez7 OCA], [https://pdbe.org/3ez7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ez7 RCSB], [https://www.ebi.ac.uk/pdbsum/3ez7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ez7 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/PARA_ECOLX PARA_ECOLX]] This protein is essential for plasmid partition. It ensures the proper distribution of newly replicated plasmids to daughter cells during cell division. ParA is trans-acting.	+	[[https://www.uniprot.org/uniprot/PARA_ECOLX PARA_ECOLX]] This protein is essential for plasmid partition. It ensures the proper distribution of newly replicated plasmids to daughter cells during cell division. ParA is trans-acting.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	</StructureSection>		</StructureSection>
	[[Category: Bacillus coli migula 1895]]		[[Category: Bacillus coli migula 1895]]
		+	[[Category: Large Structures]]
	[[Category: Schumacher, M A]]		[[Category: Schumacher, M A]]
	[[Category: Dna binding]]		[[Category: Dna binding]]

OCA at 19:16, 24 January 2018

2018-01-24T19:16:49Z

←Older revision		Revision as of 19:16, 24 January 2018
Line 1:		Line 1:
		+
	==Partition Protein Apo form in space group I4122==		==Partition Protein Apo form in space group I4122==
	<StructureSection load='3ez7' size='340' side='right' caption='[[3ez7]], [[Resolution\|resolution]] 2.92Å' scene=''>		<StructureSection load='3ez7' size='340' side='right' caption='[[3ez7]], [[Resolution\|resolution]] 2.92Å' scene=''>
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	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ez2\|3ez2]], [[3ez6\|3ez6]], [[3ez9\|3ez9]], [[3ezf\|3ezf]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ez2\|3ez2]], [[3ez6\|3ez6]], [[3ez9\|3ez9]], [[3ezf\|3ezf]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">p1, parA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">p1, parA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ez7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ez7 OCA], [http://pdbe.org/3ez7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ez7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ez7 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ez7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ez7 OCA], [http://pdbe.org/3ez7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ez7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ez7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ez7 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ez/3ez7_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ez/3ez7_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 37:		Line 38:
	[[Category: Dna binding protein]]		[[Category: Dna binding protein]]
	[[Category: Partition]]		[[Category: Partition]]
		+	[[Category: Plasmid]]
		+	[[Category: Plasmid partition]]
	[[Category: Winged-hth]]		[[Category: Winged-hth]]

OCA at 01:50, 10 February 2016

2016-02-10T01:50:56Z

←Older revision		Revision as of 01:50, 10 February 2016
Line 2:		Line 2:
	<StructureSection load='3ez7' size='340' side='right' caption='[[3ez7]], [[Resolution\|resolution]] 2.92Å' scene=''>		<StructureSection load='3ez7' size='340' side='right' caption='[[3ez7]], [[Resolution\|resolution]] 2.92Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ez7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia~~ coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EZ7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EZ7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ez7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EZ7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EZ7 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ez2\|3ez2]], [[3ez6\|3ez6]], [[3ez9\|3ez9]], [[3ezf\|3ezf]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ez2\|3ez2]], [[3ez6\|3ez6]], [[3ez9\|3ez9]], [[3ezf\|3ezf]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">p1, parA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 ~~Escherichia~~ coli])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">p1, parA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ez7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ez7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ez7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ez7 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ez7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ez7 OCA], [http://pdbe.org/3ez7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ez7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ez7 PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ez7 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 27:		Line 27:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3ez7" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia~~ coli]]	+	[[Category: Bacillus coli migula 1895]]
	[[Category: Schumacher, M A]]		[[Category: Schumacher, M A]]
	[[Category: Dna binding]]		[[Category: Dna binding]]

OCA at 10:58, 25 December 2014

2014-12-25T10:58:15Z

←Older revision		Revision as of 10:58, 25 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ez7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ez7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ez7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ez7 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ez7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ez7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ez7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ez7 PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/PARA_ECOLX PARA_ECOLX]] This protein is essential for plasmid partition. It ensures the proper distribution of newly replicated plasmids to daughter cells during cell division. ParA is trans-acting.
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 08:43, 26 November 2014

2014-11-26T08:43:41Z

←Older revision		Revision as of 08:43, 26 November 2014
Line 1:		Line 1:
-	[[~~Image:~~3ez7.~~png~~\|~~left~~\|200px]]	+	==Partition Protein Apo form in space group I4122==
		+	<StructureSection load='3ez7' size='340' side='right' caption='[[3ez7]], [[Resolution\|resolution]] 2.92Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3ez7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EZ7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EZ7 FirstGlance]. <br>
		+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ez2\|3ez2]], [[3ez6\|3ez6]], [[3ez9\|3ez9]], [[3ezf\|3ezf]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">p1, parA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ez7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ez7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ez7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ez7 PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ez/3ez7_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The accurate segregation of DNA is essential for the faithful inheritance of genetic information. Segregation of the prototypical P1 plasmid par system requires two proteins, ParA and ParB, and a centromere. When bound to ATP, ParA mediates segregation by interacting with centromere-bound ParB, but when bound to ADP, ParA fulfils a different function: DNA-binding transcription autoregulation. The structure of ParA is unknown as is how distinct nucleotides arbitrate its different functions. To address these questions, we carried out structural and biochemical studies. Crystal structures show that ParA consists of an elongated N-terminal alpha-helix, which unexpectedly mediates dimerization, a winged-HTH and a Walker-box containing C-domain. Biochemical data confirm that apoParA forms dimers at physiological concentrations. Comparisons of four apoParA structures reveal a strikingly flexible dimer interface that allows ParA to adopt multiple conformations. The ParA-ADP structure shows that ADP-binding activates DNA binding using a bipartite mechanism. First, it locks in one specific dimer conformation, and second, it induces the folding of two DNA-binding basic motifs that we show are critical for operator binding.

-	~~{{STRUCTURE_3ez7\| PDB=3ez7 \| SCENE= }}~~	+	Structural basis for ADP-mediated transcriptional regulation by P1 and P7 ParA.,Dunham TD, Xu W, Funnell BE, Schumacher MA EMBO J. 2009 Jun 17;28(12):1792-802. Epub 2009 May 21. PMID:19461582<ref>PMID:19461582</ref>

-	~~===Partition Protein Apo form in space group I4122===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_19461582}}~~	+	== References ==
-		+	<references/>
-	~~==About this Structure==~~	+	__TOC__
-	~~[[3ez7]] is~~ a ~~1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Escherichia_coli Escherichia coli]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3EZ7 OCA].~~	+	</StructureSection>
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:019461582<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Schumacher, M A]]		[[Category: Schumacher, M A]]

OCA: Protected "3ez7" [edit=sysop:move=sysop]

2013-02-13T11:02:34Z

Protected "3ez7" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:02, 13 February 2013

OCA at 11:02, 13 February 2013

2013-02-13T11:02:32Z

←Older revision		Revision as of 11:02, 13 February 2013
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-	{{Seed}}
	[[Image:3ez7.png\|left\|200px]]		[[Image:3ez7.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3ez7", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_3ez7\| PDB=3ez7 \| SCENE= }}		{{STRUCTURE_3ez7\| PDB=3ez7 \| SCENE= }}

	===Partition Protein Apo form in space group I4122===		===Partition Protein Apo form in space group I4122===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_19461582}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 19461582 is the PubMed ID number.
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	{{ABSTRACT_PUBMED_19461582}}		{{ABSTRACT_PUBMED_19461582}}

	==About this Structure==		==About this Structure==
-	~~3EZ7~~ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EZ7 OCA].	+	[[3ez7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EZ7 OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~19461582~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:019461582</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Schumacher, M A]]		[[Category: Schumacher, M A]]
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	[[Category: Dna binding protein]]		[[Category: Dna binding protein]]
	[[Category: Partition]]		[[Category: Partition]]
-	[[Category: Plasmid]]
-	[[Category: Plasmid partition]]
	[[Category: Winged-hth]]		[[Category: Winged-hth]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 5 11:23:20 2010''

OCA at 08:23, 5 May 2010

2010-05-05T08:23:21Z

←Older revision		Revision as of 08:23, 5 May 2010
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	<!--		<!--
-	The line below this paragraph, {{~~ABSTRACT_PUBMED_20236989~~}}, adds the Publication Abstract to the page	+	The line below this paragraph, {{ABSTRACT_PUBMED_19461582}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where ~~20236989~~ is the PubMed ID number.	+	(as it appears on PubMed at http://www.pubmed.gov), where 19461582 is the PubMed ID number.
	-->		-->
-	{{~~ABSTRACT_PUBMED_20236989~~}}	+	{{ABSTRACT_PUBMED_19461582}}

	==About this Structure==		==About this Structure==
Line 23:		Line 23:

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~20236989~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:19461582</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Schumacher, M A]]		[[Category: Schumacher, M A]]
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	[[Category: Winged-hth]]		[[Category: Winged-hth]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Mar 31 12~~:39:31 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 5 11:23:20 2010''

OCA at 09:39, 31 March 2010

2010-03-31T09:39:32Z

←Older revision		Revision as of 09:39, 31 March 2010
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	{{Seed}}		{{Seed}}
-	[[Image:3ez7.~~jpg~~\|left\|200px]]	+	[[Image:3ez7.png\|left\|200px]]

	<!--		<!--
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	===Partition Protein Apo form in space group I4122===		===Partition Protein Apo form in space group I4122===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_20236989}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 20236989 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_20236989}}

	==About this Structure==		==About this Structure==
-	3EZ7 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EZ7 OCA].	+	3EZ7 is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EZ7 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:20236989</ref><references group="xtra"/>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Schumacher, M A]]		[[Category: Schumacher, M A]]
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	[[Category: Winged-hth]]		[[Category: Winged-hth]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Thu Jun 4 07~~:34:~~07 2009~~''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 31 12:39:31 2010''