3f2w - Revision history

OCA at 06:41, 6 September 2023

2023-09-06T06:41:03Z

←Older revision		Revision as of 06:41, 6 September 2023
Line 3:		Line 3:
	<StructureSection load='3f2w' size='340' side='right'caption='[[3f2w]], [[Resolution\|resolution]] 3.45Å' scene=''>		<StructureSection load='3f2w' size='340' side='right'caption='[[3f2w]], [[Resolution\|resolution]] 3.45Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3f2w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F2W FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3f2w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Fusobacterium_nucleatum Fusobacterium nucleatum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F2W FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=BA:BARIUM+ION'>BA</scene>~~, ~~<scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.45Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=~~GTP~~:~~GUANOSINE-5-TRIPHOSPHATE~~'>~~GTP~~</scene><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BA:BARIUM+ION'>BA</scene>, <scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	~~<tr id~~='~~related'><td class~~=~~"sblockLbl"><b>[[Related_structure\|Related~~:~~]]</b~~></td><~~td class~~=~~"sblockDat"><div style~~=~~'overflow~~: ~~auto; max-height: 3em;~~'>~~[[3f2q\|3f2q]], [[3f2t\|3f2t]], [[3f2x\|3f2x]], [[3f2y\|3f2y]], [[3f30\|3f30]], [[3f4e\|3f4e]], [[3f4g\|3f4g]], [[3f4h\|3f4h]]~~</~~div~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f2w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2w OCA], [https://pdbe.org/3f2w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f2w RCSB], [https://www.ebi.ac.uk/pdbsum/3f2w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f2w ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f2w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2w OCA], [https://pdbe.org/3f2w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f2w RCSB], [https://www.ebi.ac.uk/pdbsum/3f2w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f2w ProSAT]</span></td></tr>
	</table>		</table>
Line 25:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Fusobacterium nucleatum]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Huang, L]]	+	[[Category: Huang L]]
-	[[Category: Serganov~~, A A]]~~	+	[[Category: Serganov AA]]
-	~~[[Category: Barium]]~~	+
-	~~[[Category: Fmn]]~~	+
-	~~[[Category: Riboswitch]]~~	+
-	~~[[Category: Rna]]~~	+
-	~~[[Category: Transcription~~]]	+

OCA at 05:33, 15 June 2022

2022-06-15T05:33:43Z

←Older revision		Revision as of 05:33, 15 June 2022
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	<StructureSection load='3f2w' size='340' side='right'caption='[[3f2w]], [[Resolution\|resolution]] 3.45Å' scene=''>		<StructureSection load='3f2w' size='340' side='right'caption='[[3f2w]], [[Resolution\|resolution]] 3.45Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3f2w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=3F2W FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3f2w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F2W FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BA:BARIUM+ION'>BA</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BA:BARIUM+ION'>BA</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3f2q\|3f2q]], [[3f2t\|3f2t]], [[3f2x\|3f2x]], [[3f2y\|3f2y]], [[3f30\|3f30]], [[3f4e\|3f4e]], [[3f4g\|3f4g]], [[3f4h\|3f4h]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3f2q\|3f2q]], [[3f2t\|3f2t]], [[3f2x\|3f2x]], [[3f2y\|3f2y]], [[3f30\|3f30]], [[3f4e\|3f4e]], [[3f4g\|3f4g]], [[3f4h\|3f4h]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=3f2w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2w OCA], [~~http~~://pdbe.org/3f2w PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3f2w RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3f2w PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3f2w ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f2w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2w OCA], [https://pdbe.org/3f2w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f2w RCSB], [https://www.ebi.ac.uk/pdbsum/3f2w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f2w ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 10:26, 9 September 2020

2020-09-09T10:26:58Z

←Older revision		Revision as of 10:26, 9 September 2020
Line 1:		Line 1:

	==Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak.==		==Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak.==
-	<StructureSection load='3f2w' size='340' side='right' caption='[[3f2w]], [[Resolution\|resolution]] 3.45Å' scene=''>	+	<StructureSection load='3f2w' size='340' side='right'caption='[[3f2w]], [[Resolution\|resolution]] 3.45Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3f2w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3F2W FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3f2w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3F2W FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BA:BARIUM+ION'>BA</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BA:BARIUM+ION'>BA</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3f2q\|3f2q]], [[3f2t\|3f2t]], [[3f2x\|3f2x]], [[3f2y\|3f2y]], [[3f30\|3f30]], [[3f4e\|3f4e]], [[3f4g\|3f4g]], [[3f4h\|3f4h]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3f2q\|3f2q]], [[3f2t\|3f2t]], [[3f2x\|3f2x]], [[3f2y\|3f2y]], [[3f30\|3f30]], [[3f4e\|3f4e]], [[3f4g\|3f4g]], [[3f4h\|3f4h]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3f2w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2w OCA], [http://pdbe.org/3f2w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3f2w RCSB], [http://www.ebi.ac.uk/pdbsum/3f2w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3f2w ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3f2w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2w OCA], [http://pdbe.org/3f2w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3f2w RCSB], [http://www.ebi.ac.uk/pdbsum/3f2w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3f2w ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 20:		Line 20:

	==See Also==		==See Also==
-	*[[Riboswitch\|Riboswitch]]	+	*[[Riboswitch 3D structures\|Riboswitch 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Huang, L]]		[[Category: Huang, L]]
	[[Category: Serganov, A A]]		[[Category: Serganov, A A]]

OCA at 02:49, 5 August 2016

2016-08-05T02:49:46Z

←Older revision		Revision as of 02:49, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak.==		==Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak.==
	<StructureSection load='3f2w' size='340' side='right' caption='[[3f2w]], [[Resolution\|resolution]] 3.45Å' scene=''>		<StructureSection load='3f2w' size='340' side='right' caption='[[3f2w]], [[Resolution\|resolution]] 3.45Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3f2q\|3f2q]], [[3f2t\|3f2t]], [[3f2x\|3f2x]], [[3f2y\|3f2y]], [[3f30\|3f30]], [[3f4e\|3f4e]], [[3f4g\|3f4g]], [[3f4h\|3f4h]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3f2q\|3f2q]], [[3f2t\|3f2t]], [[3f2x\|3f2x]], [[3f2y\|3f2y]], [[3f30\|3f30]], [[3f4e\|3f4e]], [[3f4g\|3f4g]], [[3f4h\|3f4h]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f2w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2w OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3f2w RCSB], [http://www.ebi.ac.uk/pdbsum/3f2w PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f2w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2w OCA], [http://pdbe.org/3f2w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3f2w RCSB], [http://www.ebi.ac.uk/pdbsum/3f2w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3f2w ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 16:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3f2w" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 14:00, 17 December 2014

2014-12-17T14:00:17Z

←Older revision		Revision as of 14:00, 17 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3f2w\| PDB=3f2w \| SCENE= }}~~	+	==Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak.==
-	===Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak.===	+	<StructureSection load='3f2w' size='340' side='right' caption='[[3f2w]], [[Resolution\|resolution]] 3.45Å' scene=''>
-	~~{{ABSTRACT_PUBMED_19169240}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3f2w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3F2W FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BA:BARIUM+ION'>BA</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CCC:CYTIDINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>CCC</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3f2q\|3f2q]], [[3f2t\|3f2t]], [[3f2x\|3f2x]], [[3f2y\|3f2y]], [[3f30\|3f30]], [[3f4e\|3f4e]], [[3f4g\|3f4g]], [[3f4h\|3f4h]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f2w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f2w OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3f2w RCSB], [http://www.ebi.ac.uk/pdbsum/3f2w PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The biosynthesis of several protein cofactors is subject to feedback regulation by riboswitches. Flavin mononucleotide (FMN)-specific riboswitches, also known as RFN elements, direct expression of bacterial genes involved in the biosynthesis and transport of riboflavin (vitamin B(2)) and related compounds. Here we present the crystal structures of the Fusobacterium nucleatum riboswitch bound to FMN, riboflavin and antibiotic roseoflavin. The FMN riboswitch structure, centred on an FMN-bound six-stem junction, does not fold by collinear stacking of adjacent helices, typical for folding of large RNAs. Rather, it adopts a butterfly-like scaffold, stapled together by opposingly directed but nearly identically folded peripheral domains. FMN is positioned asymmetrically within the junctional site and is specifically bound to RNA through interactions with the isoalloxazine ring chromophore and direct and Mg(2+)-mediated contacts with the phosphate moiety. Our structural data, complemented by binding and footprinting experiments, imply a largely pre-folded tertiary RNA architecture and FMN recognition mediated by conformational transitions within the junctional binding pocket. The inherent plasticity of the FMN-binding pocket and the availability of large openings make the riboswitch an attractive target for structure-based design of FMN-like antimicrobial compounds. Our studies also explain the effects of spontaneous and antibiotic-induced deregulatory mutations and provided molecular insights into FMN-based control of gene expression in normal and riboflavin-overproducing bacterial strains.

-	~~==About this Structure==~~	+	Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch.,Serganov A, Huang L, Patel DJ Nature. 2009 Mar 12;458(7235):233-7. Epub 2009 Jan 25. PMID:19169240<ref>PMID:19169240</ref>
-	~~[[3f2w]] is~~ a ~~1 chain structure~~. ~~Full crystallographic information is available from [http~~://~~oca~~.~~weizmann~~.ac.il/~~oca-bin/ocashort?id=3F2W OCA].~~	+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>

	==See Also==		==See Also==
	*[[Riboswitch\|Riboswitch]]		*[[Riboswitch\|Riboswitch]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:019169240<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
-	[[Category: Huang, L.]]	+	</StructureSection>
-	[[Category: Serganov, A A.]]	+	[[Category: Huang, L]]
		+	[[Category: Serganov, A A]]
	[[Category: Barium]]		[[Category: Barium]]
	[[Category: Fmn]]		[[Category: Fmn]]

OCA at 09:13, 11 March 2013

2013-03-11T09:13:36Z

←Older revision		Revision as of 09:13, 11 March 2013
Line 1:		Line 1:
-	[[Image:3f2w.png\|left\|200px]]
-
	{{STRUCTURE_3f2w\| PDB=3f2w \| SCENE= }}		{{STRUCTURE_3f2w\| PDB=3f2w \| SCENE= }}
-
	===Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak.===		===Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak.===
-
	{{ABSTRACT_PUBMED_19169240}}		{{ABSTRACT_PUBMED_19169240}}

OCA: Protected "3f2w" [edit=sysop:move=sysop]

2013-02-13T11:06:28Z

Protected "3f2w" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:06, 13 February 2013

OCA at 11:06, 13 February 2013

2013-02-13T11:06:26Z

←Older revision		Revision as of 11:06, 13 February 2013
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-	{{Seed}}
	[[Image:3f2w.png\|left\|200px]]		[[Image:3f2w.png\|left\|200px]]

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	{{STRUCTURE_3f2w\| PDB=3f2w \| SCENE= }}		{{STRUCTURE_3f2w\| PDB=3f2w \| SCENE= }}

	===Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak.===		===Crystal structure of the FMn riboswitch bound to FMN, Ba2+ soak.===

-
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	{{ABSTRACT_PUBMED_19169240}}		{{ABSTRACT_PUBMED_19169240}}

	==About this Structure==		==About this Structure==
-	~~3F2W~~ is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA].	+	[[3f2w]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA].
		+
		+	==See Also==
		+	*[[Riboswitch\|Riboswitch]]

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~19169240~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:019169240</ref><references group="xtra"/>
	[[Category: Huang, L.]]		[[Category: Huang, L.]]
	[[Category: Serganov, A A.]]		[[Category: Serganov, A A.]]
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	[[Category: Rna]]		[[Category: Rna]]
	[[Category: Transcription]]		[[Category: Transcription]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 22 10:32:21 2009''

OCA at 08:32, 22 March 2009

2009-03-22T08:32:22Z

←Older revision		Revision as of 08:32, 22 March 2009
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	==About this Structure==		==About this Structure==
-	3F2W is a ~~[[Single protein]]~~ structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA].	+	3F2W is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA].

	==Reference==		==Reference==
-	~~Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch., Serganov A, Huang L, Patel DJ, Nature. 2009 Jan 25.~~ PMID:~~[http:~~//~~www.ncbi.nlm.nih.gov/pubmed/19169240 19169240]~~	+	<ref group="xtra">PMID:19169240</ref><references group="xtra"/>
-	[[Category: ~~Single protein~~]]	+	[[Category: Huang, L.]]
-	[[Category: ~~Pdbx_ordinal=~~, ~~<PDBx:audit_author~~.]]	+	[[Category: Serganov, A A.]]
	[[Category: Barium]]		[[Category: Barium]]
	[[Category: Fmn]]		[[Category: Fmn]]
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	[[Category: Transcription]]		[[Category: Transcription]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed~~ Mar ~~18 20~~:38:02 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 22 10:32:21 2009''

OCA at 18:38, 18 March 2009

2009-03-18T18:38:02Z

←Older revision		Revision as of 18:38, 18 March 2009
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	==About this Structure==		==About this Structure==
-	3F2W is a ~~1 chain~~ structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA].	+	3F2W is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F2W OCA].

	==Reference==		==Reference==
-	~~<ref group="xtra">~~PMID:~~19169240<~~/~~ref><references group="xtra"~~/>	+	Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch., Serganov A, Huang L, Patel DJ, Nature. 2009 Jan 25. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/19169240 19169240]
-	[[Category: ~~Huang, L.~~]]	+	[[Category: Single protein]]
-	[[Category: ~~Serganov~~, ~~A A~~.]]	+	[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
	[[Category: Barium]]		[[Category: Barium]]
	[[Category: Fmn]]		[[Category: Fmn]]
Line 32:		Line 32:
	[[Category: Transcription]]		[[Category: Transcription]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 18 20:17:06 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 18 20:38:02 2009''