3gm5 - Revision history

OCA at 08:26, 20 March 2024

2024-03-20T08:26:28Z

←Older revision		Revision as of 08:26, 20 March 2024
Line 3:		Line 3:
	<StructureSection load='3gm5' size='340' side='right'caption='[[3gm5]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='3gm5' size='340' side='right'caption='[[3gm5]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gm5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Cals4 Cals4~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GM5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gm5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis_MB4 Caldanaerobacter subterraneus subsp. tengcongensis MB4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GM5 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>~~, ~~<scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>GloA, TTE0360 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~273068 CALS4])</td~~><~~/tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>~~[https://en.wikipedia.org/wiki/Methylmalonyl-CoA_epimerase Methylmalonyl-CoA epimerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.99.1 5.1.99.1]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm5 OCA], [https://pdbe.org/3gm5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gm5 RCSB], [https://www.ebi.ac.uk/pdbsum/3gm5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gm5 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm5 OCA], [https://pdbe.org/3gm5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gm5 RCSB], [https://www.ebi.ac.uk/pdbsum/3gm5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gm5 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q8RCQ6_CALS4 Q8RCQ6_CALS4]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Cals4~~]]	+	[[Category: Caldanaerobacter subterraneus subsp. tengcongensis MB4]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Methylmalonyl-CoA epimerase]]~~	+	[[Category: Gao P]]
-	[[Category: Gao, P]]	+	[[Category: Liang D-C]]
-	[[Category: Liang, D C]]	+	[[Category: Shi L]]
-	[[Category: Shi, L]]	+	[[Category: Yan X-X]]
-	[[Category: Yan, X X]]	+
-	~~[[Category: Isomerase]]~~	+
-	~~[[Category: Sheet-helix-sheet-sheet-sheet motif~~]]	+

OCA at 08:08, 9 March 2022

2022-03-09T08:08:30Z

←Older revision		Revision as of 08:08, 9 March 2022
Line 1:		Line 1:

	==Crystal structure of a putative methylmalonyl-coenzyme A epimerase from Thermoanaerobacter tengcongensis at 2.0 A resolution==		==Crystal structure of a putative methylmalonyl-coenzyme A epimerase from Thermoanaerobacter tengcongensis at 2.0 A resolution==
-	<StructureSection load='3gm5' size='340' side='right' caption='[[3gm5]], [[Resolution\|resolution]] 2.00Å' scene=''>	+	<StructureSection load='3gm5' size='340' side='right'caption='[[3gm5]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gm5]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Cals4 Cals4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3GM5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gm5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cals4 Cals4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GM5 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GloA, TTE0360 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273068 CALS4])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GloA, TTE0360 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273068 CALS4])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Methylmalonyl-CoA_epimerase Methylmalonyl-CoA epimerase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.99.1 5.1.99.1] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Methylmalonyl-CoA_epimerase Methylmalonyl-CoA epimerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.99.1 5.1.99.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3gm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm5 OCA], [~~http~~://pdbe.org/3gm5 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3gm5 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3gm5 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3gm5 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm5 OCA], [https://pdbe.org/3gm5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gm5 RCSB], [https://www.ebi.ac.uk/pdbsum/3gm5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gm5 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	</StructureSection>		</StructureSection>
	[[Category: Cals4]]		[[Category: Cals4]]
		+	[[Category: Large Structures]]
	[[Category: Methylmalonyl-CoA epimerase]]		[[Category: Methylmalonyl-CoA epimerase]]
	[[Category: Gao, P]]		[[Category: Gao, P]]

OCA at 06:01, 7 December 2018

2018-12-07T06:01:01Z

←Older revision		Revision as of 06:01, 7 December 2018
Line 1:		Line 1:
		+
	==Crystal structure of a putative methylmalonyl-coenzyme A epimerase from Thermoanaerobacter tengcongensis at 2.0 A resolution==		==Crystal structure of a putative methylmalonyl-coenzyme A epimerase from Thermoanaerobacter tengcongensis at 2.0 A resolution==
	<StructureSection load='3gm5' size='340' side='right' caption='[[3gm5]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='3gm5' size='340' side='right' caption='[[3gm5]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Caldanaerobacter_subterraneus_subsp._tengcongensis Caldanaerobacter subterraneus subsp. tengcongensis~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GM5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cals4 Cals4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GM5 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GloA, TTE0360 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273068 ~~Caldanaerobacter subterraneus subsp. tengcongensis~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GloA, TTE0360 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273068 CALS4])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methylmalonyl-CoA_epimerase Methylmalonyl-CoA epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.99.1 5.1.99.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methylmalonyl-CoA_epimerase Methylmalonyl-CoA epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.99.1 5.1.99.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm5 OCA], [http://pdbe.org/3gm5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gm5 RCSB], [http://www.ebi.ac.uk/pdbsum/3gm5 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm5 OCA], [http://pdbe.org/3gm5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gm5 RCSB], [http://www.ebi.ac.uk/pdbsum/3gm5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gm5 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gm5_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gm5_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Caldanaerobacter subterraneus subsp. tengcongensis~~]]	+	[[Category: Cals4]]
	[[Category: Methylmalonyl-CoA epimerase]]		[[Category: Methylmalonyl-CoA epimerase]]
	[[Category: Gao, P]]		[[Category: Gao, P]]

OCA at 13:55, 7 February 2016

2016-02-07T13:55:30Z

←Older revision		Revision as of 13:55, 7 February 2016
Line 4:		Line 4:
	<table><tr><td colspan='2'>[[3gm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis Caldanaerobacter subterraneus subsp. tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GM5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3gm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis Caldanaerobacter subterraneus subsp. tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GM5 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GloA, TTE0360 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~119072~~ Caldanaerobacter subterraneus subsp. tengcongensis])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GloA, TTE0360 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273068 Caldanaerobacter subterraneus subsp. tengcongensis])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methylmalonyl-CoA_epimerase Methylmalonyl-CoA epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.99.1 5.1.99.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methylmalonyl-CoA_epimerase Methylmalonyl-CoA epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.99.1 5.1.99.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gm5 RCSB], [http://www.ebi.ac.uk/pdbsum/3gm5 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm5 OCA], [http://pdbe.org/3gm5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gm5 RCSB], [http://www.ebi.ac.uk/pdbsum/3gm5 PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gm5 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 09:36, 8 December 2014

2014-12-08T09:36:18Z

←Older revision		Revision as of 09:36, 8 December 2014
Line 1:		Line 1:
-	~~[[Image:3gm5.png\|left\|200px]]~~	+	==Crystal structure of a putative methylmalonyl-coenzyme A epimerase from Thermoanaerobacter tengcongensis at 2.0 A resolution==
-		+	<StructureSection load='3gm5' size='340' side='right' caption='[[3gm5]], [[Resolution\|resolution]] 2.00Å' scene=''>
-	~~{{STRUCTURE_3gm5\| PDB=3gm5 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3gm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis Caldanaerobacter subterraneus subsp. tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GM5 FirstGlance]. <br>
-	===Crystal structure of a putative methylmalonyl-coenzyme A epimerase from Thermoanaerobacter tengcongensis at 2.0 A resolution===	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GloA, TTE0360 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=119072 Caldanaerobacter subterraneus subsp. tengcongensis])</td></tr>
-		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Methylmalonyl-CoA_epimerase Methylmalonyl-CoA epimerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.99.1 5.1.99.1] </span></td></tr>
-	==~~About this Structure~~==	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gm5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gm5 RCSB], [http://www.ebi.ac.uk/pdbsum/3gm5 PDBsum]</span></td></tr>
-	[[3gm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis Caldanaerobacter subterraneus subsp. tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA].	+	</table>
-		+	== Evolutionary Conservation ==
-	==~~Reference~~==	+	[[Image:Consurf_key_small.gif\|200px\|right]]
-	<~~ref group~~="~~xtra~~">~~PMID~~:~~019731367~~</~~ref~~><~~references group~~="~~xtra~~"/>	+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gm5_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Caldanaerobacter subterraneus subsp. tengcongensis]]		[[Category: Caldanaerobacter subterraneus subsp. tengcongensis]]
	[[Category: Methylmalonyl-CoA epimerase]]		[[Category: Methylmalonyl-CoA epimerase]]
-	[[Category: Gao, P.]]	+	[[Category: Gao, P]]
-	[[Category: Liang, D C.]]	+	[[Category: Liang, D C]]
-	[[Category: Shi, L.]]	+	[[Category: Shi, L]]
-	[[Category: Yan, X X.]]	+	[[Category: Yan, X X]]
	[[Category: Isomerase]]		[[Category: Isomerase]]
	[[Category: Sheet-helix-sheet-sheet-sheet motif]]		[[Category: Sheet-helix-sheet-sheet-sheet motif]]

OCA: Protected "3gm5" [edit=sysop:move=sysop]

2013-02-27T15:39:42Z

Protected "3gm5" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:39, 27 February 2013

OCA at 15:39, 27 February 2013

2013-02-27T15:39:39Z

←Older revision		Revision as of 15:39, 27 February 2013
Line 1:		Line 1:
-	{{Seed}}
	[[Image:3gm5.png\|left\|200px]]		[[Image:3gm5.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3gm5", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3gm5\| PDB=3gm5 \| SCENE= }}		{{STRUCTURE_3gm5\| PDB=3gm5 \| SCENE= }}

Line 14:		Line 7:

	==About this Structure==		==About this Structure==
-	~~3GM5~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/~~Thermoanaerobacter_tengcongensis Thermoanaerobacter~~ tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA].	+	[[3gm5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis Caldanaerobacter subterraneus subsp. tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~19731367~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:019731367</ref><references group="xtra"/>
		+	[[Category: Caldanaerobacter subterraneus subsp. tengcongensis]]
	[[Category: Methylmalonyl-CoA epimerase]]		[[Category: Methylmalonyl-CoA epimerase]]
-	[[Category: Thermoanaerobacter tengcongensis]]
	[[Category: Gao, P.]]		[[Category: Gao, P.]]
	[[Category: Liang, D C.]]		[[Category: Liang, D C.]]
Line 26:		Line 19:
	[[Category: Isomerase]]		[[Category: Isomerase]]
	[[Category: Sheet-helix-sheet-sheet-sheet motif]]		[[Category: Sheet-helix-sheet-sheet-sheet motif]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 28 11:30:22 2009''

OCA at 09:30, 28 October 2009

2009-10-28T09:30:23Z

←Older revision		Revision as of 09:30, 28 October 2009
Line 1:		Line 1:
	{{Seed}}		{{Seed}}
-	[[Image:3gm5.~~jpg~~\|left\|200px]]	+	[[Image:3gm5.png\|left\|200px]]

	<!--		<!--
Line 27:		Line 27:
	[[Category: Sheet-helix-sheet-sheet-sheet motif]]		[[Category: Sheet-helix-sheet-sheet-sheet motif]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Sep 23 08~~:46:47 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 28 11:30:22 2009''

OCA at 05:46, 23 September 2009

2009-09-23T05:46:48Z

←Older revision		Revision as of 05:46, 23 September 2009
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3gm5.jpg\|left\|200px]]

-	The ~~entry 3gm5~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3gm5", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3gm5\| PDB=3gm5 \| SCENE= }}

-	~~Authors: Liang, D., Shi, L., Gao, P., Yan, X~~.	+	===Crystal structure of a putative methylmalonyl-coenzyme A epimerase from Thermoanaerobacter tengcongensis at 2.0 A resolution===

-	Description: Crystal structure of a putative methylmalonyl-coenzyme A epimerase from Thermoanaerobacter tengcongensis at 2.0 A resolution

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Apr 15 09~~:54:53 2009''	+	==About this Structure==
		+	3GM5 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermoanaerobacter_tengcongensis Thermoanaerobacter tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GM5 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:19731367</ref><references group="xtra"/>
		+	[[Category: Methylmalonyl-CoA epimerase]]
		+	[[Category: Thermoanaerobacter tengcongensis]]
		+	[[Category: Gao, P.]]
		+	[[Category: Liang, D C.]]
		+	[[Category: Shi, L.]]
		+	[[Category: Yan, X X.]]
		+	[[Category: Isomerase]]
		+	[[Category: Sheet-helix-sheet-sheet-sheet motif]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 23 08:46:47 2009''

OCA at 06:54, 15 April 2009

2009-04-15T06:54:53Z

←Older revision		Revision as of 06:54, 15 April 2009
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3gm5 is ON HOLD	+	The entry 3gm5 is ON HOLD until Paper Publication

	Authors: Liang, D., Shi, L., Gao, P., Yan, X.		Authors: Liang, D., Shi, L., Gao, P., Yan, X.
Line 7:		Line 7:
	Description: Crystal structure of a putative methylmalonyl-coenzyme A epimerase from Thermoanaerobacter tengcongensis at 2.0 A resolution		Description: Crystal structure of a putative methylmalonyl-coenzyme A epimerase from Thermoanaerobacter tengcongensis at 2.0 A resolution

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Mar 25 12~~:17:33 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 15 09:54:53 2009''