3gnn - Revision history

OCA at 09:55, 21 February 2024

2024-02-21T09:55:30Z

←Older revision		Revision as of 09:55, 21 February 2024
Line 3:		Line 3:
	<StructureSection load='3gnn' size='340' side='right'caption='[[3gnn]], [[Resolution\|resolution]] 2.25Å' scene=''>		<StructureSection load='3gnn' size='340' side='right'caption='[[3gnn]], [[Resolution\|resolution]] 2.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gnn]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Burp1 Burp1~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GNN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gnn]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_pseudomallei_1710b Burkholderia pseudomallei 1710b]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GNN FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.25Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">nadC, BURPS1710b_1132 ([https://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=320372 BURP1])</td></tr>~~	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Nicotinate-nucleotide_diphosphorylase_(carboxylating) Nicotinate-nucleotide diphosphorylase (carboxylating)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.19 2.4.2.19] </span></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnn OCA], [https://pdbe.org/3gnn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gnn RCSB], [https://www.ebi.ac.uk/pdbsum/3gnn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gnn ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnn OCA], [https://pdbe.org/3gnn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gnn RCSB], [https://www.ebi.ac.uk/pdbsum/3gnn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gnn ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q3JV59_BURP1 Q3JV59_BURP1]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Burp1~~]]	+	[[Category: Burkholderia pseudomallei 1710b]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Structural genomic]]
-	[[Category: Decode biostructure]]
-	[[Category: Glycosyltransferase]]
-	[[Category: Niaid]]
-	[[Category: Sbri]]
-	[[Category: Ssgcid]]
-	[[Category: Transferase]]
-	[[Category: Uwppg]]

OCA at 07:49, 16 March 2022

2022-03-16T07:49:57Z

←Older revision		Revision as of 07:49, 16 March 2022
Line 1:		Line 1:

	==Crystal structure of nicotinate-nucleotide pyrophosphorylase from Burkholderi pseudomallei==		==Crystal structure of nicotinate-nucleotide pyrophosphorylase from Burkholderi pseudomallei==
-	<StructureSection load='3gnn' size='340' side='right' caption='[[3gnn]], [[Resolution\|resolution]] 2.25Å' scene=''>	+	<StructureSection load='3gnn' size='340' side='right'caption='[[3gnn]], [[Resolution\|resolution]] 2.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gnn]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Burp1 Burp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3GNN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gnn]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Burp1 Burp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GNN FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nadC, BURPS1710b_1132 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=320372 BURP1])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nadC, BURPS1710b_1132 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=320372 BURP1])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Nicotinate-nucleotide_diphosphorylase_(carboxylating) Nicotinate-nucleotide diphosphorylase (carboxylating)], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.19 2.4.2.19] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Nicotinate-nucleotide_diphosphorylase_(carboxylating) Nicotinate-nucleotide diphosphorylase (carboxylating)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.19 2.4.2.19] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnn OCA], [~~http~~://pdbe.org/3gnn PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3gnn RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3gnn PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3gnn ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnn OCA], [https://pdbe.org/3gnn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gnn RCSB], [https://www.ebi.ac.uk/pdbsum/3gnn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gnn ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 13:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gn/3gnn_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gn/3gnn_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 22:		Line 22:
	</StructureSection>		</StructureSection>
	[[Category: Burp1]]		[[Category: Burp1]]
		+	[[Category: Large Structures]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Decode biostructure]]		[[Category: Decode biostructure]]

OCA at 07:08, 1 November 2017

2017-11-01T07:08:25Z

←Older revision		Revision as of 07:08, 1 November 2017
Line 1:		Line 1:
		+
	==Crystal structure of nicotinate-nucleotide pyrophosphorylase from Burkholderi pseudomallei==		==Crystal structure of nicotinate-nucleotide pyrophosphorylase from Burkholderi pseudomallei==
	<StructureSection load='3gnn' size='340' side='right' caption='[[3gnn]], [[Resolution\|resolution]] 2.25Å' scene=''>		<StructureSection load='3gnn' size='340' side='right' caption='[[3gnn]], [[Resolution\|resolution]] 2.25Å' scene=''>
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	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nadC, BURPS1710b_1132 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=320372 BURP1])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nadC, BURPS1710b_1132 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=320372 BURP1])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nicotinate-nucleotide_diphosphorylase_(carboxylating) Nicotinate-nucleotide diphosphorylase (carboxylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.19 2.4.2.19] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nicotinate-nucleotide_diphosphorylase_(carboxylating) Nicotinate-nucleotide diphosphorylase (carboxylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.19 2.4.2.19] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnn OCA], [http://pdbe.org/3gnn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gnn RCSB], [http://www.ebi.ac.uk/pdbsum/3gnn PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnn OCA], [http://pdbe.org/3gnn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gnn RCSB], [http://www.ebi.ac.uk/pdbsum/3gnn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gnn ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 23:03, 9 February 2016

2016-02-09T23:03:47Z

←Older revision		Revision as of 23:03, 9 February 2016
Line 2:		Line 2:
	<StructureSection load='3gnn' size='340' side='right' caption='[[3gnn]], [[Resolution\|resolution]] 2.25Å' scene=''>		<StructureSection load='3gnn' size='340' side='right' caption='[[3gnn]], [[Resolution\|resolution]] 2.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3gnn]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Burkholderia_pseudomallei Burkholderia pseudomallei~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GNN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3gnn]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Burp1 Burp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GNN FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nadC, BURPS1710b_1132 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~28450 Burkholderia pseudomallei~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nadC, BURPS1710b_1132 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=320372 BURP1])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nicotinate-nucleotide_diphosphorylase_(carboxylating) Nicotinate-nucleotide diphosphorylase (carboxylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.19 2.4.2.19] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nicotinate-nucleotide_diphosphorylase_(carboxylating) Nicotinate-nucleotide diphosphorylase (carboxylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.19 2.4.2.19] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gnn RCSB], [http://www.ebi.ac.uk/pdbsum/3gnn PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnn OCA], [http://pdbe.org/3gnn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gnn RCSB], [http://www.ebi.ac.uk/pdbsum/3gnn PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gnn ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Burkholderia pseudomallei~~]]	+	[[Category: Burp1]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Decode biostructure]]		[[Category: Decode biostructure]]

OCA at 09:52, 20 January 2015

2015-01-20T09:52:25Z

←Older revision		Revision as of 09:52, 20 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3gnn]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GNN FirstGlance]. <br>		<table><tr><td colspan='2'>[[3gnn]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GNN FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nadC, BURPS1710b_1132 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28450 Burkholderia pseudomallei])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nadC, BURPS1710b_1132 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28450 Burkholderia pseudomallei])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nicotinate-nucleotide_diphosphorylase_(carboxylating) Nicotinate-nucleotide diphosphorylase (carboxylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.19 2.4.2.19] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nicotinate-nucleotide_diphosphorylase_(carboxylating) Nicotinate-nucleotide diphosphorylase (carboxylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.19 2.4.2.19] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gnn RCSB], [http://www.ebi.ac.uk/pdbsum/3gnn PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gnn RCSB], [http://www.ebi.ac.uk/pdbsum/3gnn PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 21:
	</StructureSection>		</StructureSection>
	[[Category: Burkholderia pseudomallei]]		[[Category: Burkholderia pseudomallei]]
-	[[Category: ~~SSGCID, Seattle~~ Structural ~~Genomics Center for Infectious Disease.~~]]	+	[[Category: Structural genomic]]
	[[Category: Decode biostructure]]		[[Category: Decode biostructure]]
	[[Category: Glycosyltransferase]]		[[Category: Glycosyltransferase]]
	[[Category: Niaid]]		[[Category: Niaid]]
	[[Category: Sbri]]		[[Category: Sbri]]
-	[[Category: Seattle structural genomics center for infectious disease]]
	[[Category: Ssgcid]]		[[Category: Ssgcid]]
-	[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]
	[[Category: Uwppg]]		[[Category: Uwppg]]

OCA at 13:40, 29 September 2014

2014-09-29T13:40:10Z

←Older revision		Revision as of 13:40, 29 September 2014
Line 1:		Line 1:
-	~~[[Image:3gnn.png\|left\|200px]]~~	+	==Crystal structure of nicotinate-nucleotide pyrophosphorylase from Burkholderi pseudomallei==
-		+	<StructureSection load='3gnn' size='340' side='right' caption='[[3gnn]], [[Resolution\|resolution]] 2.25Å' scene=''>
-	~~{{STRUCTURE_3gnn\| PDB=3gnn \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3gnn]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GNN FirstGlance]. <br>
-	===Crystal structure of nicotinate-nucleotide pyrophosphorylase from Burkholderi pseudomallei===	+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nadC, BURPS1710b_1132 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28450 Burkholderia pseudomallei])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nicotinate-nucleotide_diphosphorylase_(carboxylating) Nicotinate-nucleotide diphosphorylase (carboxylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.19 2.4.2.19] </span></td></tr>
-	==~~About this Structure~~==	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gnn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gnn RCSB], [http://www.ebi.ac.uk/pdbsum/3gnn PDBsum]</span></td></tr>
-	[[3gnn]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA].	+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gn/3gnn_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Burkholderia pseudomallei]]		[[Category: Burkholderia pseudomallei]]
	[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]		[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]

OCA: Protected "3gnn" [edit=sysop:move=sysop]

2012-10-21T11:23:09Z

Protected "3gnn" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:23, 21 October 2012

OCA at 11:23, 21 October 2012

2012-10-21T11:23:02Z

←Older revision		Revision as of 11:23, 21 October 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3gnn.png\|left\|200px]]

-	~~The entry~~ 3gnn ~~is ON HOLD~~	+	{{STRUCTURE_3gnn\| PDB=3gnn \| SCENE= }}

-	~~Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)~~	+	===Crystal structure of nicotinate-nucleotide pyrophosphorylase from Burkholderi pseudomallei===

-	Description: Crystal structure of nicotinate-nucleotide pyrophosphorylase from Burkholderi pseudomallei

-	~~''Page seeded by~~ [http://oca.weizmann.ac.il/oca OCA ] ~~on Thu Apr 9 12~~:17:~~39 2009''~~	+	==About this Structure==
		+	[[3gnn]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA].
		+	[[Category: Burkholderia pseudomallei]]
		+	[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]
		+	[[Category: Decode biostructure]]
		+	[[Category: Glycosyltransferase]]
		+	[[Category: Niaid]]
		+	[[Category: Sbri]]
		+	[[Category: Seattle structural genomics center for infectious disease]]
		+	[[Category: Ssgcid]]
		+	[[Category: Structural genomic]]
		+	[[Category: Transferase]]
		+	[[Category: Uwppg]]

OCA at 09:17, 9 April 2009

2009-04-09T09:17:40Z

←Older revision		Revision as of 09:17, 9 April 2009
Line 1:		Line 1:
-	~~{{Seed}}~~	+	'''Unreleased structure'''
-	~~[[Image:3gnn.jpg\|left\|200px]]~~	+

-	~~<!--~~	+	The entry 3gnn is ON HOLD
-	The ~~line below this paragraph, containing "STRUCTURE_3gnn", creates the "Structure Box" on the page.~~	+
-	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~	+
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+
-	~~or leave the SCENE parameter empty for the default display.~~	+
-	~~-->~~	+
-	~~{{STRUCTURE_3gnn\| PDB=~~3gnn ~~\| SCENE= }}~~	+

-	~~===Crystal structure of nicotinate-nucleotide pyrophosphorylase from Burkholderi pseudomallei===~~	+	Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)

		+	Description: Crystal structure of nicotinate-nucleotide pyrophosphorylase from Burkholderi pseudomallei

-	~~==About this Structure==~~	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 9 12:17:39 2009''
-	3GNN is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA].	+
-	~~[[Category: Burkholderia pseudomallei]]~~	+
-	~~[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]~~	+
-	~~[[Category: Decode biostructure]]~~	+
-	~~[[Category: Glycosyltransferase]]~~	+
-	~~[[Category: Niaid]]~~	+
-	~~[[Category: Sbri]]~~	+
-	~~[[Category: Seattle structural genomics center for infectious disease]]~~	+
-	~~[[Category: Ssgcid]]~~	+
-	~~[[Category: Structural genomic]]~~	+
-	~~[[Category: Transferase]]~~	+
-	~~[[Category: Uwppg]]~~	+
-		+
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr ~~2 16~~:15:18 2009''	+

OCA at 13:15, 2 April 2009

2009-04-02T13:15:18Z

←Older revision		Revision as of 13:15, 2 April 2009
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3gnn.jpg\|left\|200px]]

-	The ~~entry 3gnn~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3gnn", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3gnn\| PDB=3gnn \| SCENE= }}

-	~~Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID)~~	+	===Crystal structure of nicotinate-nucleotide pyrophosphorylase from Burkholderi pseudomallei===

-	Description: Crystal structure of nicotinate-nucleotide pyrophosphorylase from Burkholderi pseudomallei

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Mar 25 12~~:18:24 2009''	+	==About this Structure==
		+	3GNN is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Burkholderia_pseudomallei Burkholderia pseudomallei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNN OCA].
		+	[[Category: Burkholderia pseudomallei]]
		+	[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]
		+	[[Category: Decode biostructure]]
		+	[[Category: Glycosyltransferase]]
		+	[[Category: Niaid]]
		+	[[Category: Sbri]]
		+	[[Category: Seattle structural genomics center for infectious disease]]
		+	[[Category: Ssgcid]]
		+	[[Category: Structural genomic]]
		+	[[Category: Transferase]]
		+	[[Category: Uwppg]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Apr 2 16:15:18 2009''