3grz - Revision history

OCA at 09:56, 21 February 2024

2024-02-21T09:56:14Z

←Older revision		Revision as of 09:56, 21 February 2024
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	==CRYSTAL STRUCTURE OF ribosomal protein L11 methylase FROM Lactobacillus delbrueckii subsp. bulgaricus==		==CRYSTAL STRUCTURE OF ribosomal protein L11 methylase FROM Lactobacillus delbrueckii subsp. bulgaricus==
-	<StructureSection load='3grz' size='340' side='right'caption='[[3grz]]' scene=''>	+	<StructureSection load='3grz' size='340' side='right'caption='[[3grz]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GRZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3grz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GRZ FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [https://pdbe.org/3grz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [https://www.ebi.ac.uk/pdbsum/3grz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3grz ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [https://pdbe.org/3grz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [https://www.ebi.ac.uk/pdbsum/3grz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3grz ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/PRMA_LACDB PRMA_LACDB] Methylates ribosomal protein L11 (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 25:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
	[[Category: Almo SC]]		[[Category: Almo SC]]

OCA at 07:53, 16 March 2022

2022-03-16T07:53:25Z

←Older revision		Revision as of 07:53, 16 March 2022
Line 1:		Line 1:

	==CRYSTAL STRUCTURE OF ribosomal protein L11 methylase FROM Lactobacillus delbrueckii subsp. bulgaricus==		==CRYSTAL STRUCTURE OF ribosomal protein L11 methylase FROM Lactobacillus delbrueckii subsp. bulgaricus==
-	<StructureSection load='3grz' size='340' side='right' caption='[[3grz]]~~, [[Resolution\|resolution]] 2.00Å~~' scene=''>	+	<StructureSection load='3grz' size='340' side='right'caption='[[3grz]]' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>~~[[3grz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lacdb Lacdb].~~ Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3GRZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GRZ FirstGlance]. <br>
-	</td></tr>~~<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [https://pdbe.org/3grz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [https://www.ebi.ac.uk/pdbsum/3grz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3grz ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">prmA, LBUL_0809 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=321956 LACDB])</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [~~http~~://pdbe.org/3grz PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3grz PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3grz ProSAT], [~~http~~://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>	+
	</table>		</table>
-	== Function ==
-	[[http://www.uniprot.org/uniprot/PRMA_LACDB PRMA_LACDB]] Methylates ribosomal protein L11 (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Lacdb~~]]	+	[[Category: Large Structures]]
-	[[Category: Almo~~, S C~~]]	+	[[Category: Almo SC]]
-	[[Category: Burley~~, S K~~]]	+	[[Category: Burley SK]]
-	[[Category: Chang, S]]	+	[[Category: Chang S]]
-	[[Category: Freeman, J]]	+	[[Category: Freeman J]]
-	[[Category: Morano, C]]	+	[[Category: Morano C]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Patskovsky Y]]
-	[[Category: Patskovsky, Y]]	+	[[Category: Ramagopal UA]]
-	[[Category: Ramagopal~~, U A~~]]	+	[[Category: Sauder JM]]
-	[[Category: Sauder~~, J M~~]]	+	[[Category: Toro R]]
-	[[Category: Toro, R]]	+
-	~~[[Category: Methylase]]~~	+
-	~~[[Category: Methyltransferase]]~~	+
-	~~[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Sam-binding domain]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 05:32, 7 December 2018

2018-12-07T05:32:36Z

←Older revision		Revision as of 05:32, 7 December 2018
Line 1:		Line 1:
		+
	==CRYSTAL STRUCTURE OF ribosomal protein L11 methylase FROM Lactobacillus delbrueckii subsp. bulgaricus==		==CRYSTAL STRUCTURE OF ribosomal protein L11 methylase FROM Lactobacillus delbrueckii subsp. bulgaricus==
	<StructureSection load='3grz' size='340' side='right' caption='[[3grz]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='3grz' size='340' side='right' caption='[[3grz]], [[Resolution\|resolution]] 2.00Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">prmA, LBUL_0809 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=321956 LACDB])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">prmA, LBUL_0809 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=321956 LACDB])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [http://pdbe.org/3grz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [http://www.ebi.ac.uk/pdbsum/3grz PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [http://pdbe.org/3grz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [http://www.ebi.ac.uk/pdbsum/3grz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3grz ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 13:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gr/3grz_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gr/3grz_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 16:38, 8 February 2016

2016-02-08T16:38:34Z

←Older revision		Revision as of 16:38, 8 February 2016
Line 2:		Line 2:
	<StructureSection load='3grz' size='340' side='right' caption='[[3grz]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='3grz' size='340' side='right' caption='[[3grz]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3grz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Lactobacillus_delbrueckii_subsp._bulgaricus_atcc_baa-365 Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GRZ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3grz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lacdb Lacdb]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GRZ FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">prmA, LBUL_0809 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=321956 ~~Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">prmA, LBUL_0809 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=321956 LACDB])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [http://www.ebi.ac.uk/pdbsum/3grz PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [http://pdbe.org/3grz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [http://www.ebi.ac.uk/pdbsum/3grz PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3grz ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>

Line 24:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365~~]]	+	[[Category: Lacdb]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Burley, S K]]		[[Category: Burley, S K]]

OCA at 00:43, 25 December 2014

2014-12-25T00:43:46Z

←Older revision		Revision as of 00:43, 25 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [http://www.ebi.ac.uk/pdbsum/3grz PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [http://www.ebi.ac.uk/pdbsum/3grz PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/PRMA_LACDB PRMA_LACDB]] Methylates ribosomal protein L11 (By similarity).
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 12:36, 6 November 2014

2014-11-06T12:36:45Z

←Older revision		Revision as of 12:36, 6 November 2014
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]]		[[Category: Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]]
		+	[[Category: Almo, S C]]
		+	[[Category: Burley, S K]]
		+	[[Category: Chang, S]]
		+	[[Category: Freeman, J]]
		+	[[Category: Morano, C]]
		+	[[Category: Structural genomic]]
		+	[[Category: Patskovsky, Y]]
		+	[[Category: Ramagopal, U A]]
		+	[[Category: Sauder, J M]]
		+	[[Category: Toro, R]]
	[[Category: Methylase]]		[[Category: Methylase]]
		+	[[Category: Methyltransferase]]
		+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
		+	[[Category: PSI, Protein structure initiative]]
	[[Category: Sam-binding domain]]		[[Category: Sam-binding domain]]
		+	[[Category: Transferase]]

OCA at 11:56, 6 November 2014

2014-11-06T11:56:09Z

←Older revision		Revision as of 11:56, 6 November 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3grz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_delbrueckii_subsp._bulgaricus_atcc_baa-365 Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GRZ FirstGlance]. <br>		<table><tr><td colspan='2'>[[3grz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_delbrueckii_subsp._bulgaricus_atcc_baa-365 Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GRZ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">prmA, LBUL_0809 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">prmA, LBUL_0809 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [http://www.ebi.ac.uk/pdbsum/3grz PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [http://www.ebi.ac.uk/pdbsum/3grz PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]]		[[Category: Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]]
-	[[Category: Almo, S C.]]
-	[[Category: Burley, S K.]]
-	[[Category: Chang, S.]]
-	[[Category: Freeman, J.]]
-	[[Category: Morano, C.]]
-	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
-	[[Category: Patskovsky, Y.]]
-	[[Category: Ramagopal, U A.]]
-	[[Category: Sauder, J M.]]
-	[[Category: Toro, R.]]
	[[Category: Methylase]]		[[Category: Methylase]]
-	[[Category: Methyltransferase]]
-	[[Category: New york sgx research center for structural genomic]]
-	[[Category: Nysgxrc]]
-	[[Category: Protein structure initiative]]
-	[[Category: Psi-2]]
	[[Category: Sam-binding domain]]		[[Category: Sam-binding domain]]
-	[[Category: Structural genomic]]
-	[[Category: Transferase]]

OCA at 11:02, 29 September 2014

2014-09-29T11:02:18Z

←Older revision		Revision as of 11:02, 29 September 2014
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-	~~[[Image:3grz.png\|left\|200px]]~~	+	==CRYSTAL STRUCTURE OF ribosomal protein L11 methylase FROM Lactobacillus delbrueckii subsp. bulgaricus==
-		+	<StructureSection load='3grz' size='340' side='right' caption='[[3grz]], [[Resolution\|resolution]] 2.00Å' scene=''>
-	~~{{STRUCTURE_3grz\| PDB=3grz \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3grz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_delbrueckii_subsp._bulgaricus_atcc_baa-365 Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GRZ FirstGlance]. <br>
-	===CRYSTAL STRUCTURE OF ribosomal protein L11 methylase FROM Lactobacillus delbrueckii subsp. bulgaricus===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">prmA, LBUL_0809 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=321956 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365])</td></tr>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3grz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3grz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3grz RCSB], [http://www.ebi.ac.uk/pdbsum/3grz PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3grz TOPSAN]</span></td></tr>
-	==~~About this Structure~~==	+	<table>
-	[[3grz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_delbrueckii_subsp._bulgaricus_atcc_baa-365 Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA].	+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gr/3grz_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>

	==See Also==		==See Also==
	*[[Ribosomal protein L11 methyltransferase\|Ribosomal protein L11 methyltransferase]]		*[[Ribosomal protein L11 methyltransferase\|Ribosomal protein L11 methyltransferase]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]]		[[Category: Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]

OCA at 10:46, 20 October 2012

2012-10-20T10:46:51Z

←Older revision		Revision as of 10:46, 20 October 2012
Line 7:		Line 7:

	==About this Structure==		==About this Structure==
-	[[3grz]] is a 2 chain structure ~~of [[Ribosomal protein L11 methyltransferase]]~~ with sequence from [http://en.wikipedia.org/wiki/~~Bacteria Bacteria~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA].	+	[[3grz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_delbrueckii_subsp._bulgaricus_atcc_baa-365 Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GRZ OCA].

	==See Also==		==See Also==
	*[[Ribosomal protein L11 methyltransferase\|Ribosomal protein L11 methyltransferase]]		*[[Ribosomal protein L11 methyltransferase\|Ribosomal protein L11 methyltransferase]]
-	[[Category: ~~Bacteria~~]]	+	[[Category: Lactobacillus delbrueckii subsp. bulgaricus atcc baa-365]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]
	[[Category: Burley, S K.]]		[[Category: Burley, S K.]]

OCA at 03:14, 26 July 2012

2012-07-26T03:14:28Z

←Older revision		Revision as of 03:14, 26 July 2012
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	[[Image:3grz.png\|left\|200px]]		[[Image:3grz.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3grz", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3grz\| PDB=3grz \| SCENE= }}		{{STRUCTURE_3grz\| PDB=3grz \| SCENE= }}

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	==See Also==		==See Also==
-	*[[Ribosomal protein L11 methyltransferase]]	+	*[[Ribosomal protein L11 methyltransferase\|Ribosomal protein L11 methyltransferase]]
	[[Category: Bacteria]]		[[Category: Bacteria]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]
Line 28:		Line 22:
	[[Category: Sauder, J M.]]		[[Category: Sauder, J M.]]
	[[Category: Toro, R.]]		[[Category: Toro, R.]]
-	[[Category: Cytoplasm]]
	[[Category: Methylase]]		[[Category: Methylase]]
	[[Category: Methyltransferase]]		[[Category: Methyltransferase]]