3i5m - Revision history

OCA at 15:55, 1 November 2023

2023-11-01T15:55:52Z

←Older revision		Revision as of 15:55, 1 November 2023
Line 3:		Line 3:
	<StructureSection load='3i5m' size='340' side='right'caption='[[3i5m]], [[Resolution\|resolution]] 2.72Å' scene=''>		<StructureSection load='3i5m' size='340' side='right'caption='[[3i5m]], [[Resolution\|resolution]] 2.72Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3i5m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Grape Grape~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I5M FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3i5m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vitis_vinifera Vitis vinifera]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I5M FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~><div style='overflow: auto; max-height: 3em;'>[[3i52\|3i52]], [[3i6i\|3i6i]]</div></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.72Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">LAR1 ([https://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=29760 Grape])</td></tr>~~	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Leucoanthocyanidin_reductase Leucoanthocyanidin reductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.17.1.3 1.17.1.3] </span></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5m OCA], [https://pdbe.org/3i5m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i5m RCSB], [https://www.ebi.ac.uk/pdbsum/3i5m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i5m ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5m OCA], [https://pdbe.org/3i5m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i5m RCSB], [https://www.ebi.ac.uk/pdbsum/3i5m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i5m ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q4W2K4_VITVI Q4W2K4_VITVI]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 32:		Line 32:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Grape]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Leucoanthocyanidin reductase]]~~	+	[[Category: Vitis vinifera]]
-	~~[[Category: Estaintot, B L.d~~]]	+	[[Category: Gallois B]]
-	[[Category: Gallois, B]]	+	[[Category: Gargouri M]]
-	[[Category: Gargouri, M]]	+	[[Category: Granier T]]
-	[[Category: Granier, T]]	+	[[Category: Mauge C]]
-	[[Category: Mauge, C]]	+	[[Category: D'Estaintot BL]]
-	[[Category: ~~Flavonoid]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Rossmann fold]]~~	+
-	~~[[Category: Short chain dehydrogenase reductase~~]]	+

OCA at 10:58, 13 April 2022

2022-04-13T10:58:12Z

←Older revision		Revision as of 10:58, 13 April 2022
Line 1:		Line 1:

	==Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera==		==Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera==
-	<StructureSection load='3i5m' size='340' side='right' caption='[[3i5m]], [[Resolution\|resolution]] 2.72Å' scene=''>	+	<StructureSection load='3i5m' size='340' side='right'caption='[[3i5m]], [[Resolution\|resolution]] 2.72Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3i5m]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Grape Grape]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5M OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3I5M FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3i5m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Grape Grape]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I5M FirstGlance]. <br>
-	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3i52\|3i52]], [[3i6i\|3i6i]]</td></tr>	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3i52\|3i52]], [[3i6i\|3i6i]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LAR1 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29760 Grape])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LAR1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29760 Grape])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Leucoanthocyanidin_reductase Leucoanthocyanidin reductase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.17.1.3 1.17.1.3] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Leucoanthocyanidin_reductase Leucoanthocyanidin reductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.17.1.3 1.17.1.3] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5m OCA], [~~http~~://pdbe.org/3i5m PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3i5m RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3i5m PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3i5m ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5m OCA], [https://pdbe.org/3i5m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i5m RCSB], [https://www.ebi.ac.uk/pdbsum/3i5m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i5m ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 33:		Line 33:
	</StructureSection>		</StructureSection>
	[[Category: Grape]]		[[Category: Grape]]
		+	[[Category: Large Structures]]
	[[Category: Leucoanthocyanidin reductase]]		[[Category: Leucoanthocyanidin reductase]]
	[[Category: Estaintot, B L.d]]		[[Category: Estaintot, B L.d]]

OCA at 10:10, 19 December 2018

2018-12-19T10:10:24Z

←Older revision		Revision as of 10:10, 19 December 2018
Line 1:		Line 1:
		+
	==Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera==		==Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera==
	<StructureSection load='3i5m' size='340' side='right' caption='[[3i5m]], [[Resolution\|resolution]] 2.72Å' scene=''>		<StructureSection load='3i5m' size='340' side='right' caption='[[3i5m]], [[Resolution\|resolution]] 2.72Å' scene=''>
Line 6:		Line 7:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LAR1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29760 Grape])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LAR1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29760 Grape])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Leucoanthocyanidin_reductase Leucoanthocyanidin reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.17.1.3 1.17.1.3] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Leucoanthocyanidin_reductase Leucoanthocyanidin reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.17.1.3 1.17.1.3] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5m OCA], [http://pdbe.org/3i5m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3i5m RCSB], [http://www.ebi.ac.uk/pdbsum/3i5m PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5m OCA], [http://pdbe.org/3i5m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3i5m RCSB], [http://www.ebi.ac.uk/pdbsum/3i5m PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3i5m ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 12:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/3i5m_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/3i5m_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 11:54, 7 February 2016

2016-02-07T11:54:56Z

←Older revision		Revision as of 11:54, 7 February 2016
Line 6:		Line 6:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LAR1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29760 Grape])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LAR1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29760 Grape])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Leucoanthocyanidin_reductase Leucoanthocyanidin reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.17.1.3 1.17.1.3] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Leucoanthocyanidin_reductase Leucoanthocyanidin reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.17.1.3 1.17.1.3] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5m OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3i5m RCSB], [http://www.ebi.ac.uk/pdbsum/3i5m PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5m OCA], [http://pdbe.org/3i5m PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3i5m RCSB], [http://www.ebi.ac.uk/pdbsum/3i5m PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 16:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3i5m ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 26:		Line 26:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3i5m" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 07:32, 21 December 2014

2014-12-21T07:32:35Z

←Older revision		Revision as of 07:32, 21 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3i5m\| PDB=3i5m \| SCENE= }}~~	+	==Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera==
-	===Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera===	+	<StructureSection load='3i5m' size='340' side='right' caption='[[3i5m]], [[Resolution\|resolution]] 2.72Å' scene=''>
-	~~{{ABSTRACT_PUBMED_20138891}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3i5m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Grape Grape]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3I5M FirstGlance]. <br>
		+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3i52\|3i52]], [[3i6i\|3i6i]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">LAR1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29760 Grape])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Leucoanthocyanidin_reductase Leucoanthocyanidin reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.17.1.3 1.17.1.3] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i5m OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3i5m RCSB], [http://www.ebi.ac.uk/pdbsum/3i5m PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/3i5m_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Leucoanthocyanidin reductase (LAR) catalyzes the NADPH-dependent reduction of 2R,3S,4S-flavan-3,4-diols into 2R,3S-flavan-3-ols, a subfamily of flavonoids that is important for plant survival and for human nutrition. LAR1 from Vitis vinifera has been co-crystallized with or without NADPH and one of its natural products, (+)-catechin. Crystals diffract to a resolution between 1.75 and 2.72 A. The coenzyme and substrate binding pocket is preformed in the apoprotein and not markedly altered upon NADPH binding. The structure of the abortive ternary complex, determined at a resolution of 2.28 A, indicates the ordering of a short 3(10) helix associated with substrate binding and suggests that His122 and Lys140 act as acid-base catalysts. Based on our 3D structures, a two-step catalytic mechanism is proposed, in which a concerted dehydration precedes an NADPH-mediated hydride transfer at C4. The dehydration step involves a Lys-catalyzed deprotonation of the phenolic OH7 through a bridging water molecule and a His-catalyzed protonation of the benzylic hydroxyl at C4. The resulting quinone methide serves as an electrophilic target for hydride transfer at C4. LAR belongs to the short-chain dehydrogenase/reductase superfamily and to the PIP (pinoresinol-lariciresinol reductase, isoflavone reductase, and phenylcoumaran benzylic ether reductase) family. Our data support the concept that all PIP enzymes reduce a quinone methide intermediate and that the major role of the only residue that has been conserved from the short-chain dehydrogenase/reductase catalytic triad (Ser...TyrXXXLys), that is, lysine, is to promote the formation of this intermediate by catalyzing the deprotonation of a phenolic hydroxyl. For some PIP enzymes, this lysine-catalyzed proton abstraction may be sufficient to trigger the extrusion of the leaving group, whereas in LAR, the extrusion of a hydroxide group requires a more sophisticated mechanism of concerted acid-base catalysis that involves histidine and takes advantage of the OH4, OH5, and OH7 substituents of leucoanthocyanidins.

-	~~==About this Structure==~~	+	Crystal structure and catalytic mechanism of leucoanthocyanidin reductase from Vitis vinifera.,Mauge C, Granier T, d'Estaintot BL, Gargouri M, Manigand C, Schmitter JM, Chaudiere J, Gallois B J Mol Biol. 2010 Apr 9;397(4):1079-91. Epub 2010 Feb 6. PMID:20138891<ref>PMID:20138891</ref>
-	~~[[3i5m]] is a 1 chain~~ structure ~~with sequence~~ from ~~[http://en~~.~~wikipedia~~.~~org/wiki/Grape Grape]. Full crystallographic information is available from [http~~:~~//oca~~.~~weizmann~~.~~ac.il~~/~~oca-bin/ocashort?id=3I5M OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:020138891</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Grape]]		[[Category: Grape]]
	[[Category: Leucoanthocyanidin reductase]]		[[Category: Leucoanthocyanidin reductase]]
-	[[Category: Estaintot, B L.d.]]	+	[[Category: Estaintot, B L.d]]
-	[[Category: Gallois, B.]]	+	[[Category: Gallois, B]]
-	[[Category: Gargouri, M.]]	+	[[Category: Gargouri, M]]
-	[[Category: Granier, T.]]	+	[[Category: Granier, T]]
-	[[Category: Mauge, C.]]	+	[[Category: Mauge, C]]
	[[Category: Flavonoid]]		[[Category: Flavonoid]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
	[[Category: Rossmann fold]]		[[Category: Rossmann fold]]
	[[Category: Short chain dehydrogenase reductase]]		[[Category: Short chain dehydrogenase reductase]]

OCA at 12:19, 20 November 2013

2013-11-20T12:19:02Z

←Older revision		Revision as of 12:19, 20 November 2013
Line 4:		Line 4:

	==About this Structure==		==About this Structure==
-	[[3i5m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Vitis_vinifera Vitis vinifera~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5M OCA].	+	[[3i5m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Grape Grape]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5M OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:020138891</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020138891</ref><references group="xtra"/><references/>
		+	[[Category: Grape]]
	[[Category: Leucoanthocyanidin reductase]]		[[Category: Leucoanthocyanidin reductase]]
-	[[Category: Vitis vinifera]]
	[[Category: Estaintot, B L.d.]]		[[Category: Estaintot, B L.d.]]
	[[Category: Gallois, B.]]		[[Category: Gallois, B.]]

OCA: Protected "3i5m" [edit=sysop:move=sysop]

2013-03-13T11:07:39Z

Protected "3i5m" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:07, 13 March 2013

OCA at 11:07, 13 March 2013

2013-03-13T11:07:35Z

←Older revision		Revision as of 11:07, 13 March 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3i5m.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3i5m", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3i5m\| PDB=3i5m \| SCENE= }}		{{STRUCTURE_3i5m\| PDB=3i5m \| SCENE= }}
-
	===Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera===		===Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera===
-
-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_20138891}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 20138891 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_20138891}}		{{ABSTRACT_PUBMED_20138891}}

	==About this Structure==		==About this Structure==
-	~~3I5M~~ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vitis_vinifera Vitis vinifera]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5M OCA].	+	[[3i5m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vitis_vinifera Vitis vinifera]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5M OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~20138891~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020138891</ref><references group="xtra"/>
	[[Category: Leucoanthocyanidin reductase]]		[[Category: Leucoanthocyanidin reductase]]
	[[Category: Vitis vinifera]]		[[Category: Vitis vinifera]]
Line 35:		Line 19:
	[[Category: Rossmann fold]]		[[Category: Rossmann fold]]
	[[Category: Short chain dehydrogenase reductase]]		[[Category: Short chain dehydrogenase reductase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 25 13:40:23 2010''

OCA at 11:40, 25 February 2010

2010-02-25T11:40:23Z

←Older revision		Revision as of 11:40, 25 February 2010
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3i5m.jpg\|left\|200px]]

-	The ~~entry 3i5m~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3i5m", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3i5m\| PDB=3i5m \| SCENE= }}

-	~~Authors: Mauge, C., Gargouri, M., Langlois d'Estaintot, B., Granier, T., Gallois, B.~~	+	===Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera===

-	Description: Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Aug 5 09~~:47:~~42 2009~~''	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_20138891}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 20138891 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_20138891}}
		+
		+	==About this Structure==
		+	3I5M is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vitis_vinifera Vitis vinifera]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I5M OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:20138891</ref><references group="xtra"/>
		+	[[Category: Leucoanthocyanidin reductase]]
		+	[[Category: Vitis vinifera]]
		+	[[Category: Estaintot, B L.d.]]
		+	[[Category: Gallois, B.]]
		+	[[Category: Gargouri, M.]]
		+	[[Category: Granier, T.]]
		+	[[Category: Mauge, C.]]
		+	[[Category: Flavonoid]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Rossmann fold]]
		+	[[Category: Short chain dehydrogenase reductase]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 25 13:40:23 2010''

OCA at 06:47, 5 August 2009

2009-08-05T06:47:43Z

←Older revision		Revision as of 06:47, 5 August 2009
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3i5m is ON HOLD	+	The entry 3i5m is ON HOLD until Paper Publication

	Authors: Mauge, C., Gargouri, M., Langlois d'Estaintot, B., Granier, T., Gallois, B.		Authors: Mauge, C., Gargouri, M., Langlois d'Estaintot, B., Granier, T., Gallois, B.
Line 7:		Line 7:
	Description: Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera		Description: Structure of the apo form of leucoanthocyanidin reductase from vitis vinifera

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Jul 15 08~~:30:07 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 5 09:47:42 2009''