3ilm - Revision history

OCA at 03:35, 21 April 2022

2022-04-21T03:35:32Z

←Older revision		Revision as of 03:35, 21 April 2022
Line 1:		Line 1:

	==Crystal Structure of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437h==		==Crystal Structure of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437h==
-	<StructureSection load='3ilm' size='340' side='right' caption='[[3ilm]], [[Resolution\|resolution]] 2.26Å' scene=''>	+	<StructureSection load='3ilm' size='340' side='right'caption='[[3ilm]], [[Resolution\|resolution]] 2.26Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ilm]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Anabaena_7120 Anabaena 7120]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILM OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ILM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ilm]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Anabaena_7120 Anabaena 7120]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ILM FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3hix\|3hix]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3hix\|3hix]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">alr3790 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=103690 Anabaena 7120])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">alr3790 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=103690 Anabaena 7120])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ilm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ilm OCA], [~~http~~://pdbe.org/3ilm PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3ilm RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3ilm PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3ilm ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ilm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ilm OCA], [https://pdbe.org/3ilm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ilm RCSB], [https://www.ebi.ac.uk/pdbsum/3ilm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ilm ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/il/3ilm_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/il/3ilm_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Anabaena 7120]]		[[Category: Anabaena 7120]]
		+	[[Category: Large Structures]]
	[[Category: Acton, T B]]		[[Category: Acton, T B]]
	[[Category: Chen, Y]]		[[Category: Chen, Y]]

OCA at 09:30, 5 August 2016

2016-08-05T09:30:54Z

←Older revision		Revision as of 09:30, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal Structure of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437h==		==Crystal Structure of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437h==
	<StructureSection load='3ilm' size='340' side='right' caption='[[3ilm]], [[Resolution\|resolution]] 2.26Å' scene=''>		<StructureSection load='3ilm' size='340' side='right' caption='[[3ilm]], [[Resolution\|resolution]] 2.26Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ilm]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Nostoc_sp. Nostoc sp.~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ILM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ilm]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Anabaena_7120 Anabaena 7120]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ILM FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3hix\|3hix]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3hix\|3hix]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">alr3790 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~1180 Nostoc sp.~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">alr3790 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=103690 Anabaena 7120])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ilm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ilm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ilm RCSB], [http://www.ebi.ac.uk/pdbsum/3ilm PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ilm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ilm OCA], [http://pdbe.org/3ilm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ilm RCSB], [http://www.ebi.ac.uk/pdbsum/3ilm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ilm ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 17:		Line 18:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ilm ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Nostoc sp~~]]	+	[[Category: Anabaena 7120]]
	[[Category: Acton, T B]]		[[Category: Acton, T B]]
	[[Category: Chen, Y]]		[[Category: Chen, Y]]

OCA at 06:24, 18 December 2014

2014-12-18T06:24:58Z

←Older revision		Revision as of 06:24, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3ilm\| PDB=3ilm \| SCENE= }}~~	+	==Crystal Structure of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437h==
-	===Crystal Structure of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437h===	+	<StructureSection load='3ilm' size='340' side='right' caption='[[3ilm]], [[Resolution\|resolution]] 2.26Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3ilm]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Nostoc_sp. Nostoc sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ILM FirstGlance]. <br>
-	[[3ilm]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Nostoc_sp. Nostoc sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILM OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-	[[~~Category~~: Nostoc sp.]]	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	[[Category: Acton, T B.]]	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3hix\|3hix]]</td></tr>
-	[[Category: Chen, Y.]]	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">alr3790 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1180 Nostoc sp.])</td></tr>
-	[[Category: Ciccosanti, C.]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ilm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ilm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ilm RCSB], [http://www.ebi.ac.uk/pdbsum/3ilm PDBsum]</span></td></tr>
-	[[Category: Hunt, J F.]]	+	</table>
-	[[Category: Maglaqui, M.]]	+	== Evolutionary Conservation ==
-	[[Category: Mao, L.]]	+	[[Image:Consurf_key_small.gif\|200px\|right]]
-	[[Category: Montelione, G T.]]	+	Check<jmol>
-	[[Category: ~~NESG, Northeast~~ Structural ~~Genomics Consortium.~~]]	+	<jmolCheckbox>
-	[[Category: Tong, L.]]	+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/il/3ilm_consurf.spt"</scriptWhenChecked>
-	[[Category: Vorobiev, S.]]	+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-	[[Category: Xiao, R.]]	+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Nostoc sp]]
		+	[[Category: Acton, T B]]
		+	[[Category: Chen, Y]]
		+	[[Category: Ciccosanti, C]]
		+	[[Category: Hunt, J F]]
		+	[[Category: Maglaqui, M]]
		+	[[Category: Mao, L]]
		+	[[Category: Montelione, G T]]
		+	[[Category: Structural genomic]]
		+	[[Category: Tong, L]]
		+	[[Category: Vorobiev, S]]
		+	[[Category: Xiao, R]]
	[[Category: Alr3790]]		[[Category: Alr3790]]
	[[Category: Nesg]]		[[Category: Nesg]]
-	[[Category: Northeast structural genomics consortium]]
	[[Category: Nsr437h]]		[[Category: Nsr437h]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category: Psi-2~~]]	+
	[[Category: Rhodanese-like]]		[[Category: Rhodanese-like]]
-	[[Category: Structural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA: Protected "3ilm" [edit=sysop:move=sysop]

2013-03-13T10:57:59Z

Protected "3ilm" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:57, 13 March 2013

OCA at 10:57, 13 March 2013

2013-03-13T10:57:56Z

←Older revision		Revision as of 10:57, 13 March 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3ilm.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3ilm", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3ilm\| PDB=3ilm \| SCENE= }}		{{STRUCTURE_3ilm\| PDB=3ilm \| SCENE= }}
-
	===Crystal Structure of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437h===		===Crystal Structure of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437h===
-

	==About this Structure==		==About this Structure==
-	~~3ILM~~ is a 4 ~~chains~~ structure ~~of sequences~~ from [http://en.wikipedia.org/wiki/Nostoc_sp.~~_pcc_7120~~ Nostoc sp. ~~pcc 7120~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILM OCA].	+	[[3ilm]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Nostoc_sp. Nostoc sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILM OCA].
-	[[Category: Nostoc sp. ~~pcc 7120~~]]	+	[[Category: Nostoc sp.]]
	[[Category: Acton, T B.]]		[[Category: Acton, T B.]]
	[[Category: Chen, Y.]]		[[Category: Chen, Y.]]
Line 36:		Line 25:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 23 09:00:07 2009''

OCA at 06:00, 23 September 2009

2009-09-23T06:00:08Z

←Older revision		Revision as of 06:00, 23 September 2009
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3ilm.jpg\|left\|200px]]

-	The ~~entry 3ilm~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3ilm", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3ilm\| PDB=3ilm \| SCENE= }}

-	~~Authors: Vorobiev, S~~.~~, Chen, Y., Maglaqui, M., Ciccosanti, C., Mao, L., Xiao, R., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F.,~~ Northeast Structural Genomics Consortium ~~(NESG)~~	+	===Crystal Structure of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437h===

-	Description: Crystal Structure of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437h

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Aug 19 12~~:37:05 2009''	+	==About this Structure==
		+	3ILM is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Nostoc_sp._pcc_7120 Nostoc sp. pcc 7120]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILM OCA].
		+	[[Category: Nostoc sp. pcc 7120]]
		+	[[Category: Acton, T B.]]
		+	[[Category: Chen, Y.]]
		+	[[Category: Ciccosanti, C.]]
		+	[[Category: Hunt, J F.]]
		+	[[Category: Maglaqui, M.]]
		+	[[Category: Mao, L.]]
		+	[[Category: Montelione, G T.]]
		+	[[Category: NESG, Northeast Structural Genomics Consortium.]]
		+	[[Category: Tong, L.]]
		+	[[Category: Vorobiev, S.]]
		+	[[Category: Xiao, R.]]
		+	[[Category: Alr3790]]
		+	[[Category: Nesg]]
		+	[[Category: Northeast structural genomics consortium]]
		+	[[Category: Nsr437h]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-2]]
		+	[[Category: Rhodanese-like]]
		+	[[Category: Structural genomic]]
		+	[[Category: Unknown function]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 23 09:00:07 2009''

OCA: New page: '''Unreleased structure''' The entry 3ilm is ON HOLD Authors: Vorobiev, S., Chen, Y., Maglaqui, M., Ciccosanti, C., Mao, L., Xiao, R., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F...

2009-08-19T09:37:06Z

New page: '''Unreleased structure''' The entry 3ilm is ON HOLD Authors: Vorobiev, S., Chen, Y., Maglaqui, M., Ciccosanti, C., Mao, L., Xiao, R., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F...

New page

'''Unreleased structure'''

The entry 3ilm is ON HOLD

Authors: Vorobiev, S., Chen, Y., Maglaqui, M., Ciccosanti, C., Mao, L., Xiao, R., Acton, T.B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

Description: Crystal Structure of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437h

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 19 12:37:05 2009''