3ive - Revision history

OCA at 07:07, 10 February 2016

2016-02-10T07:07:24Z

←Older revision		Revision as of 07:07, 10 February 2016
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	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ivd\|3ivd]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ivd\|3ivd]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">c4898 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=217992 Escherichia coli O6])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">c4898 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=217992 Escherichia coli O6])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ive FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ive OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ive RCSB], [http://www.ebi.ac.uk/pdbsum/3ive PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ive FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ive OCA], [http://pdbe.org/3ive PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ive RCSB], [http://www.ebi.ac.uk/pdbsum/3ive PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ive ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__

OCA at 13:04, 6 November 2014

2014-11-06T13:04:04Z

←Older revision		Revision as of 13:04, 6 November 2014
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-	~~{{STRUCTURE_3ive\| PDB=3ive \| SCENE= }}~~	+	==Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Cytidine==
-	===Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Cytidine===	+	<StructureSection load='3ive' size='340' side='right' caption='[[3ive]], [[Resolution\|resolution]] 1.70Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3ive]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o6 Escherichia coli o6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IVE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IVE FirstGlance]. <br>
-	[[3ive]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o6 Escherichia coli o6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IVE OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CTN:4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE'>CTN</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ivd\|3ivd]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">c4898 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=217992 Escherichia coli O6])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ive FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ive OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ive RCSB], [http://www.ebi.ac.uk/pdbsum/3ive PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iv/3ive_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli o6]]		[[Category: Escherichia coli o6]]
-	[[Category: Almo, S C.]]	+	[[Category: Almo, S C]]
-	[[Category: Burley, S K.]]	+	[[Category: Burley, S K]]
-	[[Category: ~~NYSGXRC, New York SGX Research Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Ramagopal, U A.]]	+	[[Category: Ramagopal, U A]]
-	[[Category: Toro, R.]]	+	[[Category: Toro, R]]
	[[Category: Hydrolase]]		[[Category: Hydrolase]]
-	[[Category: New york sgx research center for structural genomic]]
	[[Category: Nucleotidase]]		[[Category: Nucleotidase]]
-	[[Category: ~~Nysgxrc~~]]	+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category: Psi-2]]~~	+
-	~~[[Category: Structural genomic~~]]	+

OCA: Protected "3ive" [edit=sysop:move=sysop]

2013-03-27T09:39:46Z

Protected "3ive" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:39, 27 March 2013

OCA at 09:39, 27 March 2013

2013-03-27T09:39:45Z

←Older revision		Revision as of 09:39, 27 March 2013
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-	{{Seed}}
-	[[Image:3ive.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3ive", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3ive\| PDB=3ive \| SCENE= }}		{{STRUCTURE_3ive\| PDB=3ive \| SCENE= }}
-
	===Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Cytidine===		===Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Cytidine===
-

	==About this Structure==		==About this Structure==
-	~~3IVE~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o6 Escherichia coli o6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IVE OCA].	+	[[3ive]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o6 Escherichia coli o6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IVE OCA].
	[[Category: Escherichia coli o6]]		[[Category: Escherichia coli o6]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]
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	[[Category: Psi-2]]		[[Category: Psi-2]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 30 09:31:52 2009''

OCA at 07:31, 30 September 2009

2009-09-30T07:31:54Z

←Older revision		Revision as of 07:31, 30 September 2009
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-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3ive.jpg\|left\|200px]]

-	The ~~entry 3ive~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3ive", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3ive\| PDB=3ive \| SCENE= }}

-	~~Authors: Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics~~ (~~NYSGXRC~~)	+	===Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Cytidine===

-	Description: Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Cytidine

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep ~~16 08:44~~:31 2009''	+	==About this Structure==
		+	3IVE is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_o6 Escherichia coli o6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IVE OCA].
		+	[[Category: Escherichia coli o6]]
		+	[[Category: Almo, S C.]]
		+	[[Category: Burley, S K.]]
		+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
		+	[[Category: Ramagopal, U A.]]
		+	[[Category: Toro, R.]]
		+	[[Category: Hydrolase]]
		+	[[Category: New york sgx research center for structural genomic]]
		+	[[Category: Nucleotidase]]
		+	[[Category: Nysgxrc]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-2]]
		+	[[Category: Structural genomic]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 30 09:31:52 2009''

OCA at 05:44, 16 September 2009

2009-09-16T05:44:32Z

←Older revision		Revision as of 05:44, 16 September 2009
Line 3:		Line 3:
	The entry 3ive is ON HOLD		The entry 3ive is ON HOLD

-	Authors: Ramagopal, U.A., Toro, R., Burley, S. K, Almo, S. C.	+	Authors: Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

	Description: Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Cytidine		Description: Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Cytidine

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep ~~9 09:~~08:17 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 16 08:44:31 2009''

OCA: New page: '''Unreleased structure''' The entry 3ive is ON HOLD Authors: Ramagopal, U.A., Toro, R., Burley, S. K, Almo, S. C. Description: Putative 5'-Nucleotidase (c4898) from Escherichia Coli i...

2009-09-09T06:08:17Z

New page: '''Unreleased structure''' The entry 3ive is ON HOLD Authors: Ramagopal, U.A., Toro, R., Burley, S. K, Almo, S. C. Description: Putative 5'-Nucleotidase (c4898) from Escherichia Coli i...

New page

'''Unreleased structure'''

The entry 3ive is ON HOLD

Authors: Ramagopal, U.A., Toro, R., Burley, S. K, Almo, S. C.

Description: Putative 5'-Nucleotidase (c4898) from Escherichia Coli in complex with Cytidine

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 9 09:08:17 2009''