3iy5 - Revision history

OCA at 03:45, 21 April 2022

2022-04-21T03:45:02Z

←Older revision		Revision as of 03:45, 21 April 2022
Line 3:		Line 3:
	<SX load='3iy5' size='340' side='right' viewer='molstar' caption='[[3iy5]], [[Resolution\|resolution]] 18.00Å' scene=''>		<SX load='3iy5' size='340' side='right' viewer='molstar' caption='[[3iy5]], [[Resolution\|resolution]] 18.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=3iy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iy5 OCA], [~~http~~://pdbe.org/3iy5 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3iy5 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3iy5 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3iy5 ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iy5 OCA], [https://pdbe.org/3iy5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iy5 RCSB], [https://www.ebi.ac.uk/pdbsum/3iy5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iy5 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 28:		Line 28:
	==See Also==		==See Also==
	*[[Antibody 3D structures\|Antibody 3D structures]]		*[[Antibody 3D structures\|Antibody 3D structures]]
		+	*[[Sandbox 20009\|Sandbox 20009]]
		+	*[[3D structures of non-human antibody\|3D structures of non-human antibody]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 17:25, 10 April 2020

2020-04-10T17:25:40Z

←Older revision		Revision as of 17:25, 10 April 2020
Line 3:		Line 3:
	<SX load='3iy5' size='340' side='right' viewer='molstar' caption='[[3iy5]], [[Resolution\|resolution]] 18.00Å' scene=''>		<SX load='3iy5' size='340' side='right' viewer='molstar' caption='[[3iy5]], [[Resolution\|resolution]] 18.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3iy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iy5 OCA], [http://pdbe.org/3iy5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3iy5 RCSB], [http://www.ebi.ac.uk/pdbsum/3iy5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3iy5 ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3iy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iy5 OCA], [http://pdbe.org/3iy5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3iy5 RCSB], [http://www.ebi.ac.uk/pdbsum/3iy5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3iy5 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==

OCA at 17:09, 6 March 2020

2020-03-06T17:09:35Z

←Older revision		Revision as of 17:09, 6 March 2020
Line 1:		Line 1:

	==Variable domains of the mouse Fab (1AIF) fitted into the cryoEM reconstruction of the virus-Fab 16 complex==		==Variable domains of the mouse Fab (1AIF) fitted into the cryoEM reconstruction of the virus-Fab 16 complex==
-	<~~StructureSection~~ load='3iy5' size='340' side='right' caption='[[3iy5]], [[Resolution\|resolution]] 18.00Å' scene=''>	+	<SX load='3iy5' size='340' side='right' viewer='molstar' caption='[[3iy5]], [[Resolution\|resolution]] 18.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>
Line 31:		Line 31:
	<references/>		<references/>
	__TOC__		__TOC__
-	</~~StructureSection~~>	+	</SX>
		+	[[Category: Large Structures]]
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Battisti, A J]]		[[Category: Battisti, A J]]

OCA at 08:00, 18 July 2018

2018-07-18T08:00:28Z

←Older revision		Revision as of 08:00, 18 July 2018
Line 1:		Line 1:
		+
	==Variable domains of the mouse Fab (1AIF) fitted into the cryoEM reconstruction of the virus-Fab 16 complex==		==Variable domains of the mouse Fab (1AIF) fitted into the cryoEM reconstruction of the virus-Fab 16 complex==
	<StructureSection load='3iy5' size='340' side='right' caption='[[3iy5]], [[Resolution\|resolution]] 18.00Å' scene=''>		<StructureSection load='3iy5' size='340' side='right' caption='[[3iy5]], [[Resolution\|resolution]] 18.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iy5 OCA], [http://pdbe.org/3iy5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3iy5 RCSB], [http://www.ebi.ac.uk/pdbsum/3iy5 PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iy5 OCA], [http://pdbe.org/3iy5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3iy5 RCSB], [http://www.ebi.ac.uk/pdbsum/3iy5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3iy5 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 9:		Line 10:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iy/3iy5_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iy/3iy5_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 26:		Line 27:

	==See Also==		==See Also==
-	*[[Antibody\|Antibody]]	+	*[[Antibody 3D structures\|Antibody 3D structures]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 19:56, 9 February 2016

2016-02-09T19:56:50Z

←Older revision		Revision as of 19:56, 9 February 2016
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iy5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3iy5 RCSB], [http://www.ebi.ac.uk/pdbsum/3iy5 PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iy5 OCA], [http://pdbe.org/3iy5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3iy5 RCSB], [http://www.ebi.ac.uk/pdbsum/3iy5 PDBsum]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 13:		Line 13:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iy5 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 23:		Line 23:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3iy5" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 21:10, 3 January 2015

2015-01-03T21:10:50Z

←Older revision		Revision as of 21:10, 3 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iy5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3iy5 RCSB], [http://www.ebi.ac.uk/pdbsum/3iy5 PDBsum]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iy5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3iy5 RCSB], [http://www.ebi.ac.uk/pdbsum/3iy5 PDBsum]</span></td></tr>
-	<table>	+	</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 21:
	Structural comparison of different antibodies interacting with parvovirus capsids.,Hafenstein S, Bowman VD, Sun T, Nelson CD, Palermo LM, Chipman PR, Battisti AJ, Parrish CR, Rossmann MG J Virol. 2009 Jun;83(11):5556-66. Epub 2009 Mar 25. PMID:19321620<ref>PMID:19321620</ref>		Structural comparison of different antibodies interacting with parvovirus capsids.,Hafenstein S, Bowman VD, Sun T, Nelson CD, Palermo LM, Chipman PR, Battisti AJ, Parrish CR, Rossmann MG J Virol. 2009 Jun;83(11):5556-66. Epub 2009 Mar 25. PMID:19321620<ref>PMID:19321620</ref>

-	From ~~MEDLINEÂ®~~/~~PubMedÂ®~~, a database of the U.S. National Library of Medicine.<br>	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+
		+	==See Also==
		+	*[[Antibody\|Antibody]]
	== References ==		== References ==
	<references/>		<references/>
Line 28:		Line 31:
	</StructureSection>		</StructureSection>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
-	[[Category: Battisti, A J.]]	+	[[Category: Battisti, A J]]
-	[[Category: Bowman, V D.]]	+	[[Category: Bowman, V D]]
-	[[Category: Chipman, P R.]]	+	[[Category: Chipman, P R]]
-	[[Category: Hafenstein, S.]]	+	[[Category: Hafenstein, S]]
-	[[Category: Nelson, C D.]]	+	[[Category: Nelson, C D]]
-	[[Category: Palermo, L M.]]	+	[[Category: Palermo, L M]]
-	[[Category: Parrish, C R.]]	+	[[Category: Parrish, C R]]
-	[[Category: Rossmann, M G.]]	+	[[Category: Rossmann, M G]]
-	[[Category: Sun, T.]]	+	[[Category: Sun, T]]
	[[Category: Canine]]		[[Category: Canine]]
	[[Category: Cryoem]]		[[Category: Cryoem]]

OCA: Protected "3iy5" [edit=sysop:move=sysop]

2014-05-28T10:24:34Z

Protected "3iy5" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:24, 28 May 2014

OCA at 10:24, 28 May 2014

2014-05-28T10:24:29Z

←Older revision		Revision as of 10:24, 28 May 2014
Line 1:		Line 1:
-	~~{{Seed}}~~	+	==Variable domains of the mouse Fab (1AIF) fitted into the cryoEM reconstruction of the virus-Fab 16 complex==
-	[[~~Image~~:3iy5.~~png\|left~~\|200px]]	+	<StructureSection load='3iy5' size='340' side='right' caption='[[3iy5]], [[Resolution\|resolution]] 18.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3iy5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IY5 FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iy5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3iy5 RCSB], [http://www.ebi.ac.uk/pdbsum/3iy5 PDBsum]</span></td></tr>
		+	<table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iy/3iy5_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The structures of canine parvovirus (CPV) and feline parvovirus (FPV) complexed with antibody fragments from eight different neutralizing monoclonal antibodies were determined by cryo-electron microscopy (cryoEM) reconstruction to resolutions varying from 8.5 to 18 A. The crystal structure of one of the Fab molecules and the sequence of the variable domain for each of the Fab molecules have been determined. The structures of Fab fragments not determined crystallographically were predicted by homology modeling according to the amino acid sequence. Fitting of the Fab and virus structures into the cryoEM densities identified the footprints of each antibody on the viral surface. As anticipated from earlier analyses, the Fab binding sites are directed to two epitopes, A and B. The A site is on an exposed part of the surface near an icosahedral threefold axis, whereas the B site is about equidistant from the surrounding five-, three-, and twofold axes. One antibody directed to the A site binds CPV but not FPV. Two of the antibodies directed to the B site neutralize the virus as Fab fragments. The differences in antibody properties have been linked to the amino acids within the antibody footprints, the position of the binding site relative to the icosahedral symmetry elements, and the orientation of the Fab structure relative to the surface of the virus. Most of the exposed surface area was antigenic, although each of the antibodies had a common area of overlap that coincided with the positions of the previously mapped escape mutations.

-	~~<!--~~	+	Structural comparison of different antibodies interacting with parvovirus capsids.,Hafenstein S, Bowman VD, Sun T, Nelson CD, Palermo LM, Chipman PR, Battisti AJ, Parrish CR, Rossmann MG J Virol. 2009 Jun;83(11):5556-66. Epub 2009 Mar 25. PMID:19321620<ref>PMID:19321620</ref>
-	~~The line below this paragraph~~, ~~containing "STRUCTURE_3iy5"~~, ~~creates the "Structure Box" on the page~~.	+
-	~~You may change the PDB parameter~~ (~~which sets the PDB file loaded into the applet~~)	+
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+
-	~~or leave the SCENE parameter empty for the default display.~~	+
-	-->	+
-	~~{{STRUCTURE_3iy5\| PDB=3iy5 \| SCENE= }}~~	+

-	~~===Variable domains~~ of the ~~mouse Fab (1AIF) fitted into the cryoEM reconstruction of the virus-Fab 16 complex===~~	+	From MEDLINEÂ®/PubMedÂ®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-		+	== References ==
-	~~<!--~~	+	<references/>
-	~~The line below this paragraph, {{ABSTRACT_PUBMED_19321620}}, adds the Publication Abstract to the page~~	+	__TOC__
-	~~(as it appears on PubMed at http://www~~.~~pubmed~~.~~gov), where 19321620 is the PubMed ID number~~.	+	</StructureSection>
-	-->	+
-	~~{{ABSTRACT_PUBMED_19321620}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~3IY5 is a 2 chains structure of sequences from [http:~~/~~/en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA].~~	+
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:19321620<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Battisti, A J.]]		[[Category: Battisti, A J.]]
Line 41:		Line 44:
	[[Category: Neutralizing antibody]]		[[Category: Neutralizing antibody]]
	[[Category: Parvovirus]]		[[Category: Parvovirus]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 27 14:37:36 2009''

OCA at 11:37, 27 May 2009

2009-05-27T11:37:37Z

←Older revision		Revision as of 11:37, 27 May 2009
Line 1:		Line 1:
	{{Seed}}		{{Seed}}
-	[[Image:3iy5.~~jpg~~\|left\|200px]]	+	[[Image:3iy5.png\|left\|200px]]

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	<ref group="xtra">PMID:19321620</ref><references group="xtra"/>		<ref group="xtra">PMID:19321620</ref><references group="xtra"/>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
-	[[Category: Battisti,A J.]]	+	[[Category: Battisti, A J.]]
-	[[Category: Bowman,V D.]]	+	[[Category: Bowman, V D.]]
-	[[Category: Chipman,P R.]]	+	[[Category: Chipman, P R.]]
-	[[Category: Hafenstein,S]]	+	[[Category: Hafenstein, S.]]
-	[[Category: Nelson,C D.]]	+	[[Category: Nelson, C D.]]
-	[[Category: Palermo,L M.]]	+	[[Category: Palermo, L M.]]
-	[[Category: Parrish,C R.]]	+	[[Category: Parrish, C R.]]
-	[[Category: Rossmann,M G.]]	+	[[Category: Rossmann, M G.]]
-	[[Category: Sun,T.]]	+	[[Category: Sun, T.]]
	[[Category: Canine]]		[[Category: Canine]]
	[[Category: Cryoem]]		[[Category: Cryoem]]
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	[[Category: Parvovirus]]		[[Category: Parvovirus]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May ~~13 10~~:01:09 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 27 14:37:36 2009''

OCA at 07:01, 13 May 2009

2009-05-13T07:01:10Z

←Older revision		Revision as of 07:01, 13 May 2009
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-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3iy5.jpg\|left\|200px]]

-	The ~~entry 3iy5~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3iy5", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3iy5\| PDB=3iy5 \| SCENE= }}

-	~~Authors: Hafenstein,S, Bowman,V.D., Sun,T., Nelson,C.D., Palermo,L.M., Chipman,P.R., Battisti,A.J., Parrish,C.R., Rossmann,M.G.~~	+	===Variable domains of the mouse Fab (1AIF) fitted into the cryoEM reconstruction of the virus-Fab 16 complex===

-	Description: Variable domains of the mouse Fab (1AIF) fitted into the cryoEM reconstruction of the virus-Fab 16 complex

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Apr 15~~ 10:01:11 2009''	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_19321620}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 19321620 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_19321620}}
		+
		+	==About this Structure==
		+	3IY5 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IY5 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:19321620</ref><references group="xtra"/>
		+	[[Category: Mus musculus]]
		+	[[Category: Battisti,A J.]]
		+	[[Category: Bowman,V D.]]
		+	[[Category: Chipman,P R.]]
		+	[[Category: Hafenstein,S]]
		+	[[Category: Nelson,C D.]]
		+	[[Category: Palermo,L M.]]
		+	[[Category: Parrish,C R.]]
		+	[[Category: Rossmann,M G.]]
		+	[[Category: Sun,T.]]
		+	[[Category: Canine]]
		+	[[Category: Cryoem]]
		+	[[Category: Fab footprint]]
		+	[[Category: Feline]]
		+	[[Category: Immune system]]
		+	[[Category: Neutralizing antibody]]
		+	[[Category: Parvovirus]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 13 10:01:09 2009''