3jrc - Revision history

OCA at 08:02, 6 September 2023

2023-09-06T08:02:24Z

←Older revision		Revision as of 08:02, 6 September 2023
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	==Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center==		==Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center==
-	<StructureSection load='3jrc' size='340' side='right' caption='[[3jrc]], [[Resolution\|resolution]] 3.08Å' scene=''>	+	<StructureSection load='3jrc' size='340' side='right'caption='[[3jrc]], [[Resolution\|resolution]] 3.08Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3jrc]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Ecoli Ecoli~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JRC OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3JRC FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3jrc]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JRC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3JRC FirstGlance]. <br>
-	</td></tr><tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"~~>[[3iv5\|3iv5]], [[3jr9\|3jr9]], [[3jra\|3jra]], [[3jrb\|3jrb]], [[3jrd\|3jrd]], [[3jre\|3jre]], [[3jrf\|3jrf]], [[3jrg\|3jrg]], [[3jrh\|3jrh]], [[3jri\|3jri]]</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.08Å</td></tr>
-	~~<tr~~ id~~='gene'><td class~~="~~sblockLbl~~">~~<b>~~[[~~Gene~~\|~~Gene:~~]]~~</b></td><td class="sblockDat">fis, b3261, JW3229 ([http://www~~.~~ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info~~&~~srchmode=5&id=83333 ECOLI])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3jrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jrc OCA], [https://pdbe.org/3jrc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3jrc RCSB], [https://www.ebi.ac.uk/pdbsum/3jrc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3jrc ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3jrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jrc OCA], [~~http~~://pdbe.org/3jrc PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3jrc RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3jrc PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3jrc ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/FIS_ECOLI FIS_ECOLI]] Activates ribosomal RNA transcription, as well other genes. Plays a direct role in upstream activation of rRNA promoters. Binds to a recombinational enhancer sequence that is required to stimulate hin-mediated DNA inversion. Prevents initiation of DNA replication from oriC.<ref>PMID:2209559</ref> <ref>PMID:8836178</ref>	+	[https://www.uniprot.org/uniprot/FIS_ECOLI FIS_ECOLI] Activates ribosomal RNA transcription, as well other genes. Plays a direct role in upstream activation of rRNA promoters. Binds to a recombinational enhancer sequence that is required to stimulate hin-mediated DNA inversion. Prevents initiation of DNA replication from oriC.<ref>PMID:2209559</ref> <ref>PMID:8836178</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/3jrc_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/3jrc_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
Line 29:		Line 28:
	</div>		</div>
	<div class="pdbe-citations 3jrc" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 3jrc" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[FIS protein\|FIS protein]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Ecoli]]~~	+	[[Category: Escherichia coli K-12]]
-	~~[[Category: Cascio, D]]~~	+	[[Category: Large Structures]]
-	~~[[Category: Johnson, R C]]~~	+	[[Category: Cascio D]]
-	~~[[Category: Stella, S]]~~	+	[[Category: Johnson RC]]
-	~~[[Category: Activator]]~~	+	[[Category: Stella S]]
-	~~[[Category: Dna bending]]~~	+
-	~~[[Category: Dna binding protein~~-~~dna complex~~]]	+
-	[[Category: ~~Dna-binding~~]]	+
-	[[Category: ~~Hth domain~~]]	+
-	[[Category: ~~Indirect recognition~~]]	+
-	[[Category: ~~Minor groove compression]]~~	+
-	~~[[Category: Protein-dna complex]]~~	+
-	~~[[Category: Transcription]]~~	+
-	~~[[Category: Transcription regulation~~]]	+

OCA at 08:17, 1 November 2017

2017-11-01T08:17:10Z

←Older revision		Revision as of 08:17, 1 November 2017
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	</div>		</div>
	<div class="pdbe-citations 3jrc" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 3jrc" style="background-color:#fffaf0;"></div>
-
-	==See Also==
-	*[[FIS protein\|FIS protein]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 17:35, 4 August 2016

2016-08-04T17:35:41Z

←Older revision		Revision as of 17:35, 4 August 2016
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		+
	==Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center==		==Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center==
	<StructureSection load='3jrc' size='340' side='right' caption='[[3jrc]], [[Resolution\|resolution]] 3.08Å' scene=''>		<StructureSection load='3jrc' size='340' side='right' caption='[[3jrc]], [[Resolution\|resolution]] 3.08Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3jrc]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia coli~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JRC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JRC FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3jrc]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JRC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JRC FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3iv5\|3iv5]], [[3jr9\|3jr9]], [[3jra\|3jra]], [[3jrb\|3jrb]], [[3jrd\|3jrd]], [[3jre\|3jre]], [[3jrf\|3jrf]], [[3jrg\|3jrg]], [[3jrh\|3jrh]], [[3jri\|3jri]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3iv5\|3iv5]], [[3jr9\|3jr9]], [[3jra\|3jra]], [[3jrb\|3jrb]], [[3jrd\|3jrd]], [[3jre\|3jre]], [[3jrf\|3jrf]], [[3jrg\|3jrg]], [[3jrh\|3jrh]], [[3jri\|3jri]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fis, b3261, JW3229 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~562 Escherichia coli~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fis, b3261, JW3229 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jrc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3jrc RCSB], [http://www.ebi.ac.uk/pdbsum/3jrc PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jrc OCA], [http://pdbe.org/3jrc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3jrc RCSB], [http://www.ebi.ac.uk/pdbsum/3jrc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3jrc ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jrc ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3jrc" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 34:		Line 36:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia coli~~]]	+	[[Category: Ecoli]]
	[[Category: Cascio, D]]		[[Category: Cascio, D]]
	[[Category: Johnson, R C]]		[[Category: Johnson, R C]]

OCA at 11:27, 25 December 2014

2014-12-25T11:27:46Z

←Older revision		Revision as of 11:27, 25 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jrc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3jrc RCSB], [http://www.ebi.ac.uk/pdbsum/3jrc PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jrc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3jrc RCSB], [http://www.ebi.ac.uk/pdbsum/3jrc PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/FIS_ECOLI FIS_ECOLI]] Activates ribosomal RNA transcription, as well other genes. Plays a direct role in upstream activation of rRNA promoters. Binds to a recombinational enhancer sequence that is required to stimulate hin-mediated DNA inversion. Prevents initiation of DNA replication from oriC.<ref>PMID:2209559</ref> <ref>PMID:8836178</ref>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]

OCA at 15:24, 18 December 2014

2014-12-18T15:24:11Z

←Older revision		Revision as of 15:24, 18 December 2014
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-	~~{{STRUCTURE_3jrc\| PDB=3jrc \| SCENE= }}~~	+	==Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center==
-	===Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center===	+	<StructureSection load='3jrc' size='340' side='right' caption='[[3jrc]], [[Resolution\|resolution]] 3.08Å' scene=''>
-	~~{{ABSTRACT_PUBMED_20395367}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3jrc]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JRC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JRC FirstGlance]. <br>
		+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3iv5\|3iv5]], [[3jr9\|3jr9]], [[3jra\|3jra]], [[3jrb\|3jrb]], [[3jrd\|3jrd]], [[3jre\|3jre]], [[3jrf\|3jrf]], [[3jrg\|3jrg]], [[3jrh\|3jrh]], [[3jri\|3jri]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">fis, b3261, JW3229 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jrc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3jrc RCSB], [http://www.ebi.ac.uk/pdbsum/3jrc PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/3jrc_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The bacterial nucleoid-associated protein Fis regulates diverse reactions by bending DNA and through DNA-dependent interactions with other control proteins and enzymes. In addition to dynamic nonspecific binding to DNA, Fis forms stable complexes with DNA segments that share little sequence conservation. Here we report the first crystal structures of Fis bound to high- and low-affinity 27-base-pair DNA sites. These 11 structures reveal that Fis selects targets primarily through indirect recognition mechanisms involving the shape of the minor groove and sequence-dependent induced fits over adjacent major groove interfaces. The DNA shows an overall curvature of approximately 65 degrees , and the unprecedented close spacing between helix-turn-helix motifs present in the apodimer is accommodated by severe compression of the central minor groove. In silico DNA structure models show that only the roll, twist, and slide parameters are sufficient to reproduce the changes in minor groove widths and recreate the curved Fis-bound DNA structure. Models based on naked DNA structures suggest that Fis initially selects DNA targets with intrinsically narrow minor grooves using the separation between helix-turn-helix motifs in the Fis dimer as a ruler. Then Fis further compresses the minor groove and bends the DNA to generate the bound structure.

-	~~==Function==~~	+	The shape of the DNA minor groove directs binding by the DNA-bending protein Fis.,Stella S, Cascio D, Johnson RC Genes Dev. 2010 Apr 15;24(8):814-26. PMID:20395367<ref>PMID:20395367</ref>
-	~~[[http://www.uniprot~~.~~org/uniprot/FIS_ECOLI FIS_ECOLI]] Activates ribosomal RNA transcription~~, ~~as well other genes~~. ~~Plays a direct role in upstream activation of rRNA promoters. Binds to a recombinational enhancer sequence that is required to stimulate hin~~-~~mediated DNA inversion~~. ~~Prevents initiation of DNA replication from oriC.<ref>~~PMID:~~2209559</ref>~~<ref>PMID:~~8836178~~</ref>	+

-	~~==About this Structure==~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[3jrc]] is~~ a ~~4 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Escherichia_coli Escherichia coli]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3JRC OCA].~~	+	</div>

-	==~~Reference~~==	+	==See Also==
-	~~<ref group~~=~~"xtra">PMID:020395367</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	*[[FIS protein\|FIS protein]]
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Cascio, D.]]	+	[[Category: Cascio, D]]
-	[[Category: Johnson, R C.]]	+	[[Category: Johnson, R C]]
-	[[Category: Stella, S.]]	+	[[Category: Stella, S]]
	[[Category: Activator]]		[[Category: Activator]]
	[[Category: Dna bending]]		[[Category: Dna bending]]

OCA: Protected "3jrc" [edit=sysop:move=sysop]

2013-03-27T09:21:50Z

Protected "3jrc" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:21, 27 March 2013

OCA at 09:21, 27 March 2013

2013-03-27T09:21:48Z

←Older revision		Revision as of 09:21, 27 March 2013
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-	{{Seed}}
-	[[Image:3jrc.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3jrc", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3jrc\| PDB=3jrc \| SCENE= }}		{{STRUCTURE_3jrc\| PDB=3jrc \| SCENE= }}
-
	===Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center===		===Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center===
		+	{{ABSTRACT_PUBMED_20395367}}

-		+	==Function==
-	~~<!--~~	+	[[http://www.uniprot.org/uniprot/FIS_ECOLI FIS_ECOLI]] Activates ribosomal RNA transcription, as well other genes. Plays a direct role in upstream activation of rRNA promoters. Binds to a recombinational enhancer sequence that is required to stimulate hin-mediated DNA inversion. Prevents initiation of DNA replication from oriC.<ref>PMID:2209559</ref><ref>PMID:8836178</ref>
-	~~The line below this paragraph, {{ABSTRACT_PUBMED_20395367}}, adds the Publication Abstract to the page~~	+
-	~~(as it appears on PubMed at~~ http://www.~~pubmed~~.~~gov)~~, ~~where 20395367 is the PubMed ID number~~.	+
-	-->	+
-	~~{{ABSTRACT_PUBMED_20395367}}~~	+

	==About this Structure==		==About this Structure==
-	~~3JRC~~ is a 4 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/~~Escherichia_coli_k-12~~ Escherichia coli ~~k-12~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JRC OCA].	+	[[3jrc]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JRC OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~20395367~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020395367</ref><references group="xtra"/><references/>
-	[[Category: Escherichia coli ~~k-12~~]]	+	[[Category: Escherichia coli]]
	[[Category: Cascio, D.]]		[[Category: Cascio, D.]]
	[[Category: Johnson, R C.]]		[[Category: Johnson, R C.]]
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	[[Category: Transcription]]		[[Category: Transcription]]
	[[Category: Transcription regulation]]		[[Category: Transcription regulation]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 5 11:22:42 2010''

OCA at 08:22, 5 May 2010

2010-05-05T08:22:43Z

←Older revision		Revision as of 08:22, 5 May 2010
Line 1:		Line 1:
	{{Seed}}		{{Seed}}
-	[[Image:3jrc.~~jpg~~\|left\|200px]]	+	[[Image:3jrc.png\|left\|200px]]

	<!--		<!--
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	[[Category: Transcription regulation]]		[[Category: Transcription regulation]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Apr 28 10~~:53:44 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May 5 11:22:42 2010''

OCA at 07:53, 28 April 2010

2010-04-28T07:53:46Z

←Older revision		Revision as of 07:53, 28 April 2010
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-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3jrc.jpg\|left\|200px]]

-	The ~~entry 3jrc~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3jrc", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3jrc\| PDB=3jrc \| SCENE= }}

-	~~Authors: Stella, S., Cascio, D., Johnson, R.C.~~	+	===Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center===

-	Description: Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Dec 23 09~~:19:~~45 2009~~''	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_20395367}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 20395367 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_20395367}}
		+
		+	==About this Structure==
		+	3JRC is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JRC OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:20395367</ref><references group="xtra"/>
		+	[[Category: Escherichia coli k-12]]
		+	[[Category: Cascio, D.]]
		+	[[Category: Johnson, R C.]]
		+	[[Category: Stella, S.]]
		+	[[Category: Activator]]
		+	[[Category: Dna bending]]
		+	[[Category: Dna binding protein-dna complex]]
		+	[[Category: Dna-binding]]
		+	[[Category: Hth domain]]
		+	[[Category: Indirect recognition]]
		+	[[Category: Minor groove compression]]
		+	[[Category: Protein-dna complex]]
		+	[[Category: Transcription]]
		+	[[Category: Transcription regulation]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 28 10:53:44 2010''

OCA at 07:19, 23 December 2009

2009-12-23T07:19:45Z

←Older revision		Revision as of 07:19, 23 December 2009
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3jrc is ON HOLD	+	The entry 3jrc is ON HOLD until Paper Publication

	Authors: Stella, S., Cascio, D., Johnson, R.C.		Authors: Stella, S., Cascio, D., Johnson, R.C.
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	Description: Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center		Description: Crystal structure of Fis bound to 27 bp DNA F29 containing 5 G/Cs at center

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Sep 30 08~~:59:43 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 23 09:19:45 2009''