3jzv - Revision history

OCA at 13:08, 11 August 2016

2016-08-11T13:08:05Z

←Older revision		Revision as of 13:08, 11 August 2016
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		+
	==Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.==		==Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.==
	<StructureSection load='3jzv' size='340' side='right' caption='[[3jzv]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='3jzv' size='340' side='right' caption='[[3jzv]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3jzv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Rhodospirillum_rubrum_atcc_11170 Rhodospirillum rubrum atcc 11170~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JZV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JZV FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3jzv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhort Rhort]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JZV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JZV FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Rru_A2000 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269796 ~~Rhodospirillum rubrum ATCC 11170~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Rru_A2000 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269796 RHORT])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jzv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3jzv RCSB], [http://www.ebi.ac.uk/pdbsum/3jzv PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jzv OCA], [http://pdbe.org/3jzv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3jzv RCSB], [http://www.ebi.ac.uk/pdbsum/3jzv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3jzv ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3jzv ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Rhodospirillum rubrum atcc 11170~~]]	+	[[Category: Rhort]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Burley, S K]]		[[Category: Burley, S K]]

OCA at 13:02, 6 November 2014

2014-11-06T13:02:33Z

←Older revision		Revision as of 13:02, 6 November 2014
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-	~~{{STRUCTURE_3jzv\| PDB=3jzv \| SCENE= }}~~	+	==Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.==
-	===Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.===	+	<StructureSection load='3jzv' size='340' side='right' caption='[[3jzv]], [[Resolution\|resolution]] 2.30Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3jzv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_rubrum_atcc_11170 Rhodospirillum rubrum atcc 11170]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JZV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JZV FirstGlance]. <br>
-	[[3jzv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_rubrum_atcc_11170 Rhodospirillum rubrum atcc 11170]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JZV OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Rru_A2000 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269796 Rhodospirillum rubrum ATCC 11170])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jzv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3jzv RCSB], [http://www.ebi.ac.uk/pdbsum/3jzv PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jz/3jzv_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Rhodospirillum rubrum atcc 11170]]		[[Category: Rhodospirillum rubrum atcc 11170]]
-	[[Category: Almo, S C.]]	+	[[Category: Almo, S C]]
-	[[Category: Burley, S K~~.]]~~	+	[[Category: Burley, S K]]
-	~~[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]~~	+
-	~~[[Category: Ramagopal, U A.]]~~	+
-	~~[[Category: Toro, R.]]~~	+
-	~~[[Category: Cupin-2 fold]]~~	+
-	~~[[Category: New york sgx research center for structural genomic]]~~	+
-	~~[[Category: Nysgxrc]]~~	+
-	~~[[Category: Protein structure initiative]]~~	+
-	~~[[Category: Psi-2~~]]	+
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
		+	[[Category: Ramagopal, U A]]
		+	[[Category: Toro, R]]
		+	[[Category: Cupin-2 fold]]
		+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
		+	[[Category: PSI, Protein structure initiative]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA: Protected "3jzv" [edit=sysop:move=sysop]

2013-03-27T09:37:19Z

Protected "3jzv" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:37, 27 March 2013

OCA at 09:37, 27 March 2013

2013-03-27T09:37:17Z

←Older revision		Revision as of 09:37, 27 March 2013
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-	{{Seed}}
-	[[Image:3jzv.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3jzv", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3jzv\| PDB=3jzv \| SCENE= }}		{{STRUCTURE_3jzv\| PDB=3jzv \| SCENE= }}
-
	===Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.===		===Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.===
-

	==About this Structure==		==About this Structure==
-	~~3JZV~~ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_rubrum_atcc_11170 Rhodospirillum rubrum atcc 11170]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JZV OCA].	+	[[3jzv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_rubrum_atcc_11170 Rhodospirillum rubrum atcc 11170]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JZV OCA].
	[[Category: Rhodospirillum rubrum atcc 11170]]		[[Category: Rhodospirillum rubrum atcc 11170]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]
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	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 14 10:39:14 2009''

OCA at 08:39, 14 October 2009

2009-10-14T08:39:15Z

←Older revision		Revision as of 08:39, 14 October 2009
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-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3jzv.jpg\|left\|200px]]

-	The ~~entry 3jzv~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3jzv", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3jzv\| PDB=3jzv \| SCENE= }}

-	~~Authors~~: ~~Ramagopal, U.~~A.~~, Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)~~	+	===Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.===

-	Description: Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct ~~7 13~~:44:29 2009''	+	==About this Structure==
		+	3JZV is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_rubrum_atcc_11170 Rhodospirillum rubrum atcc 11170]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JZV OCA].
		+	[[Category: Rhodospirillum rubrum atcc 11170]]
		+	[[Category: Almo, S C.]]
		+	[[Category: Burley, S K.]]
		+	[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
		+	[[Category: Ramagopal, U A.]]
		+	[[Category: Toro, R.]]
		+	[[Category: Cupin-2 fold]]
		+	[[Category: New york sgx research center for structural genomic]]
		+	[[Category: Nysgxrc]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-2]]
		+	[[Category: Structural genomic]]
		+	[[Category: Unknown function]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 14 10:39:14 2009''

OCA at 11:44, 7 October 2009

2009-10-07T11:44:29Z

←Older revision		Revision as of 11:44, 7 October 2009
Line 3:		Line 3:
	The entry 3jzv is ON HOLD		The entry 3jzv is ON HOLD

-	Authors:	+	Authors: Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

	Description: Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.		Description: Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Sep 30 09~~:01:39 2009''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 7 13:44:29 2009''

OCA: New page: '''Unreleased structure''' The entry 3jzv is ON HOLD Authors: Description: Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain. ''Page seeded by [http://oca.w...

2009-09-30T07:01:39Z

New page: '''Unreleased structure''' The entry 3jzv is ON HOLD Authors: Description: Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain. ''Page seeded by [http://oca.w...

New page

'''Unreleased structure'''

The entry 3jzv is ON HOLD

Authors:

Description: Crystal structure of Rru_A2000 from Rhodospirillum rubrum: A cupin-2 domain.

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 30 09:01:39 2009''